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Journal of Biological Chemistry, ISSN 0021-9258, 2017, Volume 292, Issue 31, pp. 12744 - 12753
Fe-S cofactors are composed of iron and inorganic sulfur in various stoichiometries. A complex assembly pathway conducts their initial synthesis and subsequent... 
HSPA9 | iron-response element (IRE) | mitochondrial respiratory chain complex | RESPIRATORY-CHAIN | ELEMENT-BINDING-PROTEIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | FE-S CLUSTERS | ESCHERICHIA-COLI | HSC20 | metalloenzyme | HEAVY-SUBUNIT | RESPONSIVE ELEMENT | CYSTEINE DESULFURASE | MESSENGER-RNA | iron-sulfur protein | iron-sulfur cluster biogenesis | SCAFFOLD PROTEIN | TARGETED DELETION | energy metabolism | ISCU | Iron Regulatory Protein 1 - physiology | Electron Transport | Humans | Protein Multimerization | Homeostasis | Succinate Dehydrogenase - biosynthesis | Iron-Binding Proteins - chemistry | Iron-Regulatory Proteins - biosynthesis | Succinate Dehydrogenase - chemistry | Iron-Sulfur Proteins - chemistry | Molecular Chaperones - chemistry | Apoenzymes - metabolism | Iron-Regulatory Proteins - physiology | Iron-Regulatory Proteins - chemistry | Iron-Sulfur Proteins - biosynthesis | Carbon-Sulfur Lyases - physiology | HSP70 Heat-Shock Proteins - chemistry | Protein Interaction Domains and Motifs | HSP70 Heat-Shock Proteins - biosynthesis | Molecular Chaperones - biosynthesis | Iron-Binding Proteins - physiology | Response Elements | Iron Regulatory Protein 1 - chemistry | Carbon-Sulfur Lyases - biosynthesis | Mitochondrial Proteins - physiology | Models, Molecular | Mitochondrial Proteins - biosynthesis | Molecular Chaperones - physiology | Iron-Binding Proteins - biosynthesis | Protein Folding | Iron-Sulfur Proteins - physiology | Gene Expression Regulation, Enzymologic | Animals | Iron - physiology | Mitochondrial Proteins - chemistry | Apoenzymes - chemistry | HSP70 Heat-Shock Proteins - physiology | Succinate Dehydrogenase - physiology | Carbon-Sulfur Lyases - chemistry | Iron Regulatory Protein 1 - biosynthesis | Minireviews
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 03/2016, Volume 291, Issue 13, pp. 6714 - 6722
The transcriptional coactivators CREB-binding protein (CBP) and p300 undergo a particularly rich set of interactions with disordered and partly ordered... 
ACTIVATION DOMAIN | UNSTRUCTURED PROTEINS | viral oncoprotein | intrinsically disordered protein | coupled folding and binding | intrinsically disordered region | BIOCHEMISTRY & MOLECULAR BIOLOGY | structure-function | STAT transcription factor | C-MYB | transcriptional coactivator | VIRAL-PROTEINS | transcriptional activation | P53 TRANSACTIVATION DOMAIN | COMPLEX-FORMATION | cAMP response element-binding protein (CREB) | hypoxia-inducible factor (HIF) | IDP | STRUCTURAL BASIS | IDR | KIX DOMAIN | TAZ2 DOMAIN | PEPTIDE MOTIFS | protein-protein interaction | Humans | E1A-Associated p300 Protein - genetics | STAT Transcription Factors - metabolism | CREB-Binding Protein - chemistry | NF-kappa B - metabolism | E1A-Associated p300 Protein - metabolism | NF-kappa B - chemistry | Viral Proteins - metabolism | Tumor Suppressor Protein p53 - genetics | CREB-Binding Protein - genetics | CREB-Binding Protein - metabolism | Hypoxia-Inducible Factor 1, alpha Subunit - metabolism | Hypoxia-Inducible Factor 1, alpha Subunit - chemistry | Transcription, Genetic | Protein Interaction Domains and Motifs | Protein Structure, Secondary | Hypoxia-Inducible Factor 1, alpha Subunit - genetics | Viral Proteins - chemistry | E1A-Associated p300 Protein - chemistry | Tumor Suppressor Protein p53 - metabolism | Models, Molecular | Viral Proteins - genetics | Intrinsically Disordered Proteins - genetics | Protein Folding | STAT Transcription Factors - genetics | NF-kappa B - genetics | Intrinsically Disordered Proteins - chemistry | Protein Binding | STAT Transcription Factors - chemistry | Tumor Suppressor Protein p53 - chemistry | Intrinsically Disordered Proteins - metabolism | Minireviews
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 03/2016, Volume 291, Issue 13, pp. 6689 - 6695
Intrinsically disordered proteins (IDPs) are characterized by a lack of persistent structure. Since their identification more than a decade ago, many questions... 
signaling | residual structure | electrostatics | coupled folding and binding | BIOCHEMISTRY & MOLECULAR BIOLOGY | protein electrostatics | C-MYB | TRANSITION-STATE | INDUCED FIT | protein-protein interactions | INTRINSICALLY DISORDERED PROTEINS | LINEAGE LEUKEMIA PROTEIN | IDP | MOLECULAR RECOGNITION | KIX DOMAIN | SEQUENCE | protein folding | phi-value | TRANSACTIVATION DOMAIN | kinetics | biophysics | protein dynamic | CONFORMATIONAL SELECTION | Cyclic AMP Response Element-Binding Protein - chemistry | Humans | Myeloid Cell Leukemia Sequence 1 Protein - metabolism | CREB-Binding Protein - chemistry | Proto-Oncogene Proteins - chemistry | CREB-Binding Protein - genetics | CREB-Binding Protein - metabolism | Thermodynamics | Apoptosis Regulatory Proteins - genetics | Myeloid Cell Leukemia Sequence 1 Protein - chemistry | Protein Interaction Domains and Motifs | Proto-Oncogene Proteins - metabolism | Signal Transduction | Apoptosis Regulatory Proteins - chemistry | Proto-Oncogene Proteins - genetics | Static Electricity | Intrinsically Disordered Proteins - genetics | Molecular Dynamics Simulation | Myeloid Cell Leukemia Sequence 1 Protein - genetics | Protein Folding | Apoptosis Regulatory Proteins - metabolism | Cyclic AMP Response Element-Binding Protein - genetics | Intrinsically Disordered Proteins - chemistry | Cyclic AMP Response Element-Binding Protein - metabolism | Hydrophobic and Hydrophilic Interactions | Protein Binding | Kinetics | Intrinsically Disordered Proteins - metabolism | Minireviews
Journal Article
American Journal of Physiology - Cell Physiology, ISSN 0363-6143, 06/2009, Volume 296, Issue 6, pp. 1258 - 1270
Myostatin is a negative regulator of skeletal muscle size, previously shown to inhibit muscle cell differentiation. Myostatin requires both Smad2 and Smad3... 
MAFbx | Mammalian target of rapamycin complex signaling | MuRF1 | S6 kinase | Smad signaling | Human skeletal muscle cells | Transducer of regulated Ca | responsive element-binding protein activity | MuRF-1 | Atrogin | Transforming growth factor-β-like molecules | IGF-I | PHYSIOLOGY | ATROPHY | RAPID DISUSE | human skeletal muscle cells | transforming growth factor-beta-like molecules | SKELETAL-MUSCLE HYPERTROPHY | FOXO TRANSCRIPTION FACTORS | UBIQUITIN LIGASES | transducer of regulated Ca2+-responsive element-binding protein activity | CELL BIOLOGY | atrogin | PATHWAY | GROWTH | GENE-EXPRESSION | mammalian target of rapamycin complex signaling | CONDITIONAL ACTIVATION | Activin Receptors, Type I - antagonists & inhibitors | Protein Kinases - metabolism | Phosphorylation | Protein Kinases - genetics | Humans | Smad3 Protein - metabolism | Muscle Fibers, Skeletal - drug effects | Tripartite Motif Proteins | Smad3 Protein - genetics | Transfection | RNA Interference | Myoblasts, Skeletal - pathology | Smad2 Protein - genetics | Muscle Proteins - metabolism | Dioxoles - pharmacology | Regulatory-Associated Protein of mTOR | Benzamides - pharmacology | Myostatin - metabolism | Proto-Oncogene Proteins c-akt - metabolism | Rapamycin-Insensitive Companion of mTOR Protein | Ribosomal Protein S6 Kinases, 70-kDa - metabolism | Signal Transduction | Cell Size - drug effects | Cells, Cultured | Smad2 Protein - metabolism | Ubiquitin-Protein Ligases - metabolism | Organ Size | Activin Receptors, Type I - metabolism | Myoblasts, Skeletal - enzymology | SKP Cullin F-Box Protein Ligases - metabolism | Mice, SCID | Myostatin - antagonists & inhibitors | Adaptor Proteins, Signal Transducing | Animals | Carrier Proteins - metabolism | Proteins - metabolism | Cell Differentiation - drug effects | Follistatin - pharmacology | Muscle Fibers, Skeletal - pathology | Creatine Kinase - metabolism | Mice | Protein Kinase Inhibitors - pharmacology | TOR Serine-Threonine Kinases | Myoblasts, Skeletal - drug effects | Insulin-Like Growth Factor I - metabolism | Muscle Fibers, Skeletal - enzymology | RNA, Small Interfering - metabolism
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 2004, Volume 32, Issue 4, pp. 1279 - 1288
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 2017, Volume 292, Issue 39, pp. 16333 - 16350
Sterol regulatory element-binding proteins (SREBPs) in the fission yeast Schizosaccharomyces pombe regulate lipid homeostasis and the hypoxic response under... 
VALOSIN-CONTAINING PROTEIN | COMPLEX | SREBP CLEAVAGE | UBIQUITIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | VCP MUTATIONS | HMG-COA REDUCTASE | AAA-ATPASE | MEMBRANE-PROTEINS | MITOCHONDRIAL QUALITY-CONTROL | SCHIZOSACCHAROMYCES-POMBE | Golgi Apparatus - enzymology | Schizosaccharomyces pombe Proteins - chemistry | Immunoprecipitation | Transcription Factors - chemistry | Peptide Hydrolases - genetics | Protein Multimerization | Valosin Containing Protein | Recombinant Fusion Proteins - metabolism | Cell Cycle Proteins - chemistry | Gene Deletion | Schizosaccharomyces pombe Proteins - metabolism | Cell Cycle Proteins - genetics | Carrier Proteins - chemistry | Protein Interaction Domains and Motifs | Sterol Regulatory Element Binding Protein 2 - metabolism | Peptide Fragments - genetics | Sterol Regulatory Element Binding Protein 1 - metabolism | Peptide Hydrolases - metabolism | Peptide Fragments - metabolism | Schizosaccharomyces pombe Proteins - genetics | Cell Cycle Proteins - metabolism | Ubiquitin-Protein Ligases - metabolism | Adenosine Triphosphatases - metabolism | Glycosylation | Transcription Factors - genetics | Ubiquitin-Protein Ligases - chemistry | Peptide Hydrolases - chemistry | Protein Transport | Transcription Factors - metabolism | Carrier Proteins - genetics | Schizosaccharomyces - metabolism | Peptide Fragments - chemistry | Carrier Proteins - metabolism | Adenosine Triphosphatases - chemistry | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - metabolism | Golgi Apparatus - metabolism | Schizosaccharomyces - enzymology | Adenosine Triphosphatases - genetics | Protein Processing, Post-Translational | Ubiquitin-Protein Ligases - genetics | hypoxia | transcription regulation | VCP | SREBP | Protein Synthesis and Degradation | Schizosaccharomyces pombe | membrane transport | Cdc48 | E3 ubiquitin ligase | ATPases associated with diverse cellular activities (AAA) | p97
Journal Article
FEBS Letters, ISSN 0014-5793, 2005, Volume 579, Issue 15, pp. 3346 - 3354
Intrinsically unstructured proteins (IUPs) are common in various proteomes and occupy a unique structural and functional niche in which function is directly... 
Protein disorder in vivo | Functional classification | Intrinsically disordered protein | Natively unfolded protein | Residual structure | PCS | intrinsically unstructured protein | NACP | calpastatin | Fourier-transformed infrared spectroscopy | circular dichroism | Cdk | non-A beta component of Alzheimer's disease amyloid plaque (also termed α-synuclein) | PP II | PEVK | CBP | CREB-binding protein | MoRE | CREB | molecular recognition element | MAP2 | FTIR | sodium dodecyl sulfate–polyacrylamide gel electrophoresis | Raman optical activity | primary contact site | cAMP response element binding protein | RNAP II | CST | IUP | ROA | DHPR | KID | kinase-inducible domain | polyproline II helix | SDS–PAGE | nuclear magnetic resonance | region rich in Pro, Glu, Val and Lys | NMR | DNA-dependent RNA polymerase II | dihydropyridine receptor | cyclin-dependent kinase | microtubule-associated protein 2 | RAMAN OPTICAL-ACTIVITY | TAU-PROTEIN | TRANSCRIPTIONAL ACTIVATION | intrinsically disordered protein | residual structure | TERMINAL DOMAIN | CYTOPLASMIC P21(CIP1/WAF1) | BIOCHEMISTRY & MOLECULAR BIOLOGY | DISORDERED PROTEINS | protein disorder in vivo | CELL BIOLOGY | NATIVELY UNFOLDED PROTEINS | CALPASTATIN SUBDOMAIN-A | BIOPHYSICS | natively unfolded protein | SIGMA-FACTOR | functional classification | SEQUENCE EVOLUTION | Animals | Proteins - metabolism | Protein Conformation | Proteins - classification | Structure-Activity Relationship | Proteins - chemistry | Protein Folding | Nuclear magnetic resonance | RNA | Binding proteins | Alzheimer's disease | RNA polymerases | Protein binding
Journal Article
Cellular Signalling, ISSN 0898-6568, 2006, Volume 18, Issue 9, pp. 1351 - 1359
Follicle-stimulating hormone (FSH) is necessary and sufficient to induce maturation of ovarian follicles to a mature, preovulatory phenotype in the intact... 
Protein kinase A | Mitogen-activated protein kinase | Follicle-stimulating hormone | Female reproduction | Hypoxia-induced factor 1 | Histone H3 | histone H3 | SIDE-CHAIN CLEAVAGE | follicle-stimulating hormone | OVARIAN-FOLLICLE | ELEMENT-BINDING PROTEIN | HISTONE H3 PHOSPHORYLATION | hypoxia-induced factor 1 | STEROIDOGENIC FACTOR-I | TRANSCRIPTION FACTOR FKHR | female reproduction | P38 MAP KINASE | LUTEINIZING-HORMONE | CELL BIOLOGY | mitogen-activated protein kinase | FOLLICLE-STIMULATING-HORMONE | protein kinase A | GROWTH-FACTOR-I | Cyclic AMP-Dependent Protein Kinases - metabolism | Follicle Stimulating Hormone - metabolism | Tumor Suppressor Proteins - metabolism | Granulosa Cells - physiology | Gene Expression Regulation | Protein Tyrosine Phosphatases - metabolism | Phosphatidylinositol 3-Kinases - metabolism | Animals | Forkhead Transcription Factors - metabolism | Cyclic AMP Response Element-Binding Protein - metabolism | Female | Signal Transduction - physiology | p38 Mitogen-Activated Protein Kinases - metabolism | Enzyme Activation | Histones - metabolism | Tyrosine | Chromatin | Phosphatases | Corticosteroids | Peptides | Tuberous sclerosis | Glycoproteins | DNA binding proteins | Hormones | Gene expression | Phosphatidylinositol | Luteinizing hormone | Mitogens | Vascular endothelial growth factor | Protein kinases | Growth factors | Protein binding | GIOT-1, gonadotropin-inducible ovarian transcription factor-1 | p70S6K, p70 ribosomal S6 kinase | TGFβ, transforming growth factor β | EGF, epidermal growth factor | CREB, cAMP response element binding protein | PDE, phosphodiesterase | R, PKA regulatory subunits | GPCR, G-protein-coupled receptor | MAP2D, microtubule-associated protein 2D | Sp1 | Epac, exchange proteins activated by cAMP | PI3K, phosphatidylinositol 3-kinase | IGF, insulin-like growth factor | mTOR, mammalian target of rapamycin | AKAP, A kinase anchoring protein | Sp3, specific protein 1 | PKI, PKA inhibitor peptide | PKC, protein kinase C | SCC, P450 cholesterol side chain cleavage | VEGF, vascular endothelial growth factor | CBP, CREB binding protein | ERK, extracellular regulated kinase | MNK, MAPK-interacting kinase | Aromatase, P450 aromatase | ChIP, chromatin immunoprecipitation assay | HIF-1, hypoxia-induced factor-1 | Egr-1, early growth response protein-1 | LH, luteinizing hormone | MEK, mitogen- and extracellular-regulated kinase kinase | TSC, tuberous sclerosis complex tumor suppressor gene | SF-1, steroidogenic factor-1 | SGK, serum glucocorticoid kinase | RSK, p90 ribosomal S6 protein kinase | LRH-1, liver receptor homolog-1 | MAPK, mitogen-activated protein kinase | PKA, protein kinase A | PTP, protein tyrosine phosphatase | FSH, follicle-stimulating hormone | MK, MAPK-activated protein kinases
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 4/2007, Volume 104, Issue 16, pp. 6519 - 6526
Two classes of sterols, cholesterol and oxysterols, block export of sterol regulatory element-binding proteins (SREBPs) from the endoplasmic reticulum (ER) to... 
Transfection | Sterols | Plasmids | Cell lines | Antibodies | Amino acids | Cell membranes | CHO cells | Cholesterols | P branes | COPII vesicles | Cholesterol homeostasis | Oxysterols | SREBP pathway | COAT | cholesterol homeostasis | COENZYME-A REDUCTASE | CHOLESTEROL | oxysterols | MULTIDISCIPLINARY SCIENCES | CLEAVAGE-ACTIVATING PROTEIN | INHIBITION | ER MEMBRANES | HAMSTER OVARY CELLS | SENSING DOMAIN | BINDING | VESICLE | Protein Sorting Signals - physiology | Cricetulus | Vesicular Transport Proteins - metabolism | Humans | Endoplasmic Reticulum - metabolism | Molecular Sequence Data | Intracellular Signaling Peptides and Proteins - immunology | Protein Transport - physiology | Antibodies, Blocking - pharmacology | Intracellular Signaling Peptides and Proteins - metabolism | Intracellular Signaling Peptides and Proteins - deficiency | Vesicular Transport Proteins - antagonists & inhibitors | Clone Cells | Membrane Proteins - metabolism | Intracellular Signaling Peptides and Proteins - genetics | CHO Cells | Amino Acid Sequence | Cricetinae | Intracellular Signaling Peptides and Proteins - antagonists & inhibitors | COP-Coated Vesicles - metabolism | Membrane Proteins - immunology | Sterol Regulatory Element Binding Proteins - metabolism | Animals | Membrane Proteins - antagonists & inhibitors | Golgi Apparatus - metabolism | Intracellular Signaling Peptides and Proteins - physiology | Homeostasis | Research | Endoplasmic reticulum | Biological Sciences
Journal Article
FEBS Letters, ISSN 0014-5793, 2010, Volume 584, Issue 14, pp. 2981 - 2989
Apoptosis, an essential and basic biological phenomenon, is regulated in a complex manner by a multitude of factors. Myeloid cell leukemia 1 (Mcl-1), an... 
Post-translational modification | Phosphorylation | Myeloid cell leukemia 1 | Apoptosis | granzyme B | Bcl-2 homologous antagonist killer | MULE | JNK | HIF-1α | BFL-1/A1 | NF-κB | p53 upregulated modulator of apoptosis | CHX | GM-CSF | GrB | checkpoint 1 protein | cAMP response element binding protein | cyclin dependent kinase 1 | BCL-XL | Mir-29b | β-TrCP | Bcl-2 homology | proliferating cell nuclear antigen | extracellular regulated protein kinase | PEST | STAT response element | Bcl-2-associated protein X | CRE | micro inhibiting RNA 29b | BH3 interacting domain death agonist | proline/glutamic acid/serine/threonine | ERK | beta transducin-containing protein | Pin-1 | PCNA | MCL-1 | SRE | nuclear factor kappa B | C-Jun N-terminal kinase | peptidyl-prolyl cis-trans isomerase NIMA interacting protein 1 | BCL-2 | signal transducers and activators of transcription | CREB | BID | interleukin | B-cell lymphoma 2 | MCL-1 ubiquitin ligase | cAMP response element | hypoxia-inducible factor 1α | Bcl-2 like protein X | VEGF | BAK | Bcl-2 related protein A1 | cycloheximide | STAT | vascular endothelial growth factor | CHK-1 | granulocyte–macrophage colony-stimulating factor | BAX | PUMA | CDK-1 | MULTIPLE-MYELOMA | ANTIAPOPTOTIC MCL-1 | KINASE PATHWAY | BIOCHEMISTRY & MOLECULAR BIOLOGY | BH3-ONLY LIGANDS | CELL-SURVIVAL | NEUTROPHIL APOPTOSIS | CELL BIOLOGY | BIOPHYSICS | SIGNALING PATHWAY | BCL-2 PROTEINS | ANTISENSE OLIGONUCLEOTIDES | TRANSCRIPTION FACTOR | Myeloid Progenitor Cells - metabolism | Humans | Leukemia, Myeloid - genetics | Apoptosis - genetics | Leukemia - metabolism | Protein Structure, Tertiary - genetics | Lymphoma, B-Cell - genetics | Proteins - genetics | Proteins - metabolism | Myeloid Cells - metabolism | Protein Processing, Post-Translational | Dimerization | B-Lymphocytes - metabolism | Leukemia - genetics | Ubiquitin | Ligases | Cyclohexane | Proline | Lymphomas | Macrophage colony stimulating factor | Tumor proteins | Glutamate | Vascular endothelial growth factor | Protein binding
Journal Article