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1. Epitope mapping protocols
2009, 2nd ed., Methods in molecular biology, ISBN 1934115177, Volume 524, xiii, 456
Antigen-antibody reactions | Research | Methodology | Antigenic determinants
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2. Epitope mapping : a practical approach
by Westwood, Olwyn M. R and Hay, Frank C
2001, ISBN 0199636524, xviii, 284
Antigenic determinants
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3. Full Text Mass spectrometric epitope mapping
by Opuni, Kwabena F.M and Al‐Majdoub, Mahmoud and Yefremova, Yelena and El‐Kased, Reham F and Koy, Cornelia and Glocker, Michael O
Mass Spectrometry Reviews, ISSN 0277-7037, 03/2018, Volume 37, Issue 2, pp. 229 - 241
Mass spectrometric epitope mapping has become a versatile method to precisely determine a soluble antigen's partial structure that directly interacts with an... 
linear epitope | discontinuous epitope | consecutive epitope | conformational epitope | assembled epitope | mass spectrometry | epitope extraction | epitope excision | CHEMICAL CROSS-LINKING | HYDROGEN/DEUTERIUM EXCHANGE | PROTEIN-STRUCTURE DETERMINATION | MONOCLONAL-ANTIBODY | B-CELL EPITOPES | BENCE-JONES PROTEINS | SPECTROSCOPY | H BINDING-PROTEIN | HIGHER-ORDER STRUCTURE | FAST PHOTOCHEMICAL OXIDATION | ANTIGEN-ANTIBODY INTERACTIONS | Monoclonal antibodies | Proteolysis | Mass spectrometry | Analysis | Antigenic determinants
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4. Epitope mapping protocols
by Morris, Glenn E and SpringerLink (Online service)
1996, Methods in molecular biology, ISBN 0896033759, Volume 66, xiii, 416
Interest in epitope mapping, or finding out where antibodies bind to their antigens, is by no means restricted to immunologists, but is shared by biolo­ gists... 
Antigen-antibody reactions | Research | Methodology | Antigenic determinants | Biochemistry, general | Biochemistry | Life Sciences
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5. Full Text Food Allergen Epitope Mapping
by Liu, CQ and Sathe, SK
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, ISSN 0021-8561, 07/2018, Volume 66, Issue 28, pp. 7238 - 7248
With the increased global awareness and rise in food allergies, a multifold interest in food allergens is evident. The presence of undeclared food allergens... 
allergen | linear | CRYSTAL-STRUCTURE | FOOD SCIENCE & TECHNOLOGY | ANA O 2 | IGE-EPITOPES | ARA H 2 | food | epitope mapping | IMMUNOGLOBULIN-E-BINDING | CONFORMATIONAL EPITOPE | protein | MAJOR SHRIMP ALLERGEN | AGRICULTURE, MULTIDISCIPLINARY | CROSS-REACTIVITY | T-CELL EPITOPE | CHEMISTRY, APPLIED | conformational | 3-DIMENSIONAL STRUCTURES
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6. Full Text Food Allergen Epitope Mapping
by Liu, Changqi and Sathe, Shridhar K
Journal of Agricultural and Food Chemistry, ISSN 0021-8561, 07/2018, Volume 66, Issue 28, pp. 7238 - 7248
With the increased global awareness and rise in food allergies, a multifold interest in food allergens is evident. The presence of undeclared food allergens... 
allergen | linear | epitope mapping | food | protein | conformational | Proteins - genetics | Epitope Mapping | Animals | Food Hypersensitivity - immunology | Allergens - immunology | Humans | Allergens - chemistry | Allergens - genetics | Proteins - chemistry | Proteins - immunology
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7. Full Text Mapping and Role of the CD8+ T Cell Response During Primary Zika Virus Infection in Mice
by Elong Ngono, Annie and Vizcarra, Edward A and Tang, William W and Sheets, Nicholas and Joo, Yunichel and Kim, Kenneth and Gorman, Matthew J and Diamond, Michael S and Shresta, Sujan
Cell Host & Microbe, ISSN 1931-3128, 01/2017, Volume 21, Issue 1, pp. 35 - 46
CD8 T cells may play a dual role in protection against and pathogenesis of flaviviruses, including Zika virus (ZIKV). We evaluated the CD8 T cell response in... 
LysMCre+IFNARfl/fl | CD8+ T cell | peptide | Zika virus | mouse model | epitope | LysMCre | CD8 | IFNAR | T cell | ANTIBODIES | WESTERN-HEMISPHERE | DENGUE HEMORRHAGIC-FEVER | MICROBIOLOGY | SEXUAL TRANSMISSION | MOUSE MODELS | PATHOGENESIS | INTERFERON | REPLICATION | VIROLOGY | PROTECTIVE ROLE | DISEASE | PARASITOLOGY | Zika Virus - immunology | CD8-Positive T-Lymphocytes - transplantation | Mice, Inbred C57BL | Adoptive Transfer | Receptor, Interferon alpha-beta - antagonists & inhibitors | Mice, Knockout | Zika Virus Infection - virology | Animals | Receptor, Interferon alpha-beta - immunology | Antibodies, Blocking - immunology | Zika Virus Infection - immunology | Mice | Receptor, Interferon alpha-beta - genetics | Epitopes, T-Lymphocyte - immunology | CD8-Positive T-Lymphocytes - immunology | Disease Models, Animal | LysMCre+IFNARfl | CD8+ T cell
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8. Epitope mapping protocols
by Reineke, Ulrich and Schutkowski, Mike
2009, 2nd ed., Methods in molecular biology, ISBN 1934115177, Volume 524
Antigen-antibody reactions | Epitope Mapping | Methodology | methods | Epitopes | Research | Antigenic determinants
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9. Full Text Fluorinated Carbohydrates as Lectin Ligands: Synthesis of OH/F‐Substituted N‐Glycan Core Trimannoside and Epitope Mapping by 2D STD‐TOCSYreF NMR spectroscopy
by Diercks, Tammo and Infantino, Angela Simona and Unione, Luca and Jiménez‐Barbero, Jesús and Oscarson, Stefan and Gabius, Hans‐Joachim
Chemistry – A European Journal, ISSN 0947-6539, 10/2018, Volume 24, Issue 59, pp. 15761 - 15765
Glycan‐protein interactions play an important role in a broad range of physiological processes, raising interest to elucidate the structural interplay. Yet,... 
glycan | sugar code | 19F NMR spectroscopy | epitope mapping | fluorine | F NMR spectroscopy | GLYCODENDRIMERSOMES | NETWORK | RECOGNITION | NUCLEAR-MAGNETIC-RESONANCE | F-19 NMR spectroscopy | CHEMISTRY, MULTIDISCIPLINARY | BINDING SPECIFICITY | AGGLUTININ | CONCANAVALIN-A | PEA LECTIN | GALECTINS | SUGAR INTERACTIONS | Polysaccharides | Sexually transmitted diseases | Analysis | Physiological aspects | Lectins | Nuclear magnetic resonance spectroscopy | Fluorides | Sugars | Antigenic determinants | Monosaccharides | Carbohydrates | Spectroscopy | Spatial discrimination | Mannose | Mapping | Crystallography | Peptide mapping | Dispersion | Glycan | Magnetic resonance spectroscopy | Proteins | Spectral resolution | Spectrum analysis | Epitope mapping | Protein interaction | NMR spectroscopy | Fluorination | Spatial resolution
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10. Full Text Intact Transition Epitope Mapping (ITEM)
by Yefremova, Yelena and Opuni, Kwabena F. M and Danquah, Bright D and Thiesen, Hans-Juergen and Glocker, Michael O
Journal of The American Society for Mass Spectrometry, ISSN 1044-0305, 8/2017, Volume 28, Issue 8, pp. 1612 - 1622
Intact transition epitope mapping (ITEM) enables rapid and accurate determination of protein antigen-derived epitopes by either epitope extraction or epitope... 
Biotechnology | Chemistry | Analytical Chemistry | Antibody–epitope reactivities | Quadrupole time-of-flight mass spectrometry | Proteomics | Native electrospray mass spectrometry | Ion mobility separation | Bioinformatics | Antibody–antigen interactions | Organic Chemistry | CHEMISTRY, ANALYTICAL | MOBILITY-MASS-SPECTROMETRY | Antibody-epitope reactivities | CRYSTAL-STRUCTURE | BIOCHEMICAL RESEARCH METHODS | CHEMISTRY, PHYSICAL | ANTIBODY | BIOMOLECULES | MODEL | SURFACE-INDUCED DISSOCIATION | SPECTROSCOPY | HIGHER-ORDER STRUCTURE | PROTEIN COMPLEXES | Antibody-antigen interactions | INFRARED RADIATIVE DISSOCIATION | ANTIGEN | Amino Acid Sequence | Animals | Peptides - chemistry | Proteolysis | Spectrometry, Mass, Electrospray Ionization - methods | Humans | Immunoglobulin G - chemistry | Ion Mobility Spectrometry - methods | Epitope Mapping - methods | Mice | Tandem Mass Spectrometry - methods | Antigen-antibody reactions | Viral antibodies | Peptides | Analysis | Antibodies | Collisions (Nuclear physics) | Mass spectrometry | Antigenic determinants | Antigens | Filtration | Ionic mobility | Ions | Mapping | Quadrupoles
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11. Full Text Comparison of experimental fine‐mapping to in silico prediction results of HIV‐1 epitopes reveals ongoing need for mapping experiments
by Roider, Julia and Meissner, Tim and Kraut, Franziska and Vollbrecht, Thomas and Stirner, Renate and Bogner, Johannes R and Draenert, Rika
Immunology, ISSN 0019-2805, 10/2014, Volume 143, Issue 2, pp. 193 - 201
Summary Methods for identifying physiologically relevant CD8 T‐cell epitopes are critically important not only for the development of T‐cell‐based vaccines but... 
CD8 T cell | MHC class I | epitope prediction | optimal epitope | epitope mapping | Epitope mapping | Optimal epitope | Epitope prediction | LYMPHOCYTE EPITOPE | ESCAPE MUTATIONS | T-CELL EPITOPES | VARIANT EPITOPES | HLA SYSTEM | 2 PARTS | IMMUNOLOGY | HUMAN-IMMUNODEFICIENCY-VIRUS | PEPTIDE-MHC BINDING | CTL EPITOPES | ANALYSIS RESOURCE | Cell Line | HIV-1 - pathogenicity | Reproducibility of Results | Humans | AIDS Vaccines - immunology | Computational Biology | Histocompatibility Antigens Class I - immunology | Epitopes, T-Lymphocyte | CD4-Positive T-Lymphocytes - immunology | HIV-1 - immunology | Computer Simulation | Epitope Mapping - methods | Software | CD4-Positive T-Lymphocytes - virology | Immunodominant Epitopes | Comparative analysis | T cells | Antigenic determinants | Original
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12. Full Text Epitope mapping by phage display
by Moreira, Gustavo Marçal Schmidt Garcia and Fühner, Viola and Hust, Michael
Methods in Molecular Biology, ISSN 1064-3745, 2018, Volume 1701, pp. 497 - 518
Among the molecules of the immune system, antibodies, particularly monoclonal antibodies (mAbs), have been shown to be interesting for many biological... 
Antigen | Epitope mapping | Genomic library | Phage display | Oligopeptide phage display | Single-gene library | Antibodies, Monoclonal - genetics | Animals | Humans | Epitope Mapping - methods | Epitopes - chemistry | Peptide Library | Epitopes - genetics | Antibodies, Monoclonal - chemistry
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13. Full Text Transmembrane protein topology mapping by the substituted cysteine accessibility method (SCAM TM): Application to lipid-specific membrane protein topogenesis
by Bogdanov, Mikhail and Zhang, Wei and Xie, Jun and Dowhan, William
Methods, ISSN 1046-2023, 2005, Volume 36, Issue 2, pp. 148 - 171
We provide an overview of lipid-dependent polytopic membrane protein topogenesis, with particular emphasis on strains genetically altered in their lipid... 
Topogenesis | Protein topology | Membrane protein | Phosphatidylethanolamine | Cysteine scanning | Phospholipid | Maleimides | METAL-TETRACYCLINE/H+ ANTIPORTER | REDUCED FOLATE CARRIER | BIOCHEMISTRY & MOLECULAR BIOLOGY | F1F0 ATP SYNTHASE | BIOCHEMICAL RESEARCH METHODS | topogenesis | SCANNING MUTAGENESIS | PHOSPHOLIPID-COMPOSITION | LARGE ENVELOPE PROTEIN | phoshatidylethanolamine | ESCHERICHIA-COLI-CELLS | STAPHYLOCOCCAL ALPHA-HEMOLYSIN | protein topology | DEPENDENT PHOSPHOTRANSFERASE SYSTEM | membrane protein | cysteine scanning | ENDOPLASMIC-RETICULUM | phospholipid | maleimides | Models, Chemical | Cytoplasm - metabolism | Membrane Lipids - chemistry | Dose-Response Relationship, Drug | Lipids - chemistry | X-Ray Diffraction | Escherichia coli - metabolism | Sulfhydryl Compounds - chemistry | Cell Membrane - metabolism | Genes, Reporter | Catalytic Domain | Magnetic Resonance Spectroscopy | Protein Structure, Secondary | Phospholipids - chemistry | Lipid Metabolism | Glycosylation | Cysteine - chemistry | Recombinant Fusion Proteins - chemistry | Macromolecular Substances | Membrane Transport Proteins - chemistry | Algorithms | Biochemistry - methods | Protein Isoforms | Liposomes - metabolism | Epitopes - chemistry | Lipid Bilayers - chemistry | Mutation | Maleimides - chemistry | Phosphatidylethanolamines - chemistry | Proteins | Protein biosynthesis | Cysteine | Methods | Cystine | Thiols | Chemical tests and reagents | Phospholipids
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14. Full Text Transancestral mapping and genetic load in systemic lupus erythematosus
by Langefeld, Carl D and Ainsworth, Hannah C and Graham, Deborah S. Cunninghame and Kelly, Jennifer A and Comeau, Mary E and Marion, Miranda C and Howard, Timothy D and Ramos, Paula S and Croker, Jennifer A and Morris, David L and Sandling, Johanna K and Almlof, Jonas Carlsson and Acevedo-Vasquez, Eduardo M and Alarcon, Graciela S and Babini, Alejana M and Baca, Vicente and Bengtsson, Anders A and Berbotto, Guillermo A and Bijl, Marc and Brown, Elizabeth E and Brunner, Hermine I and Cardiel, Mario H and Catoggio, Luis and Cervera, Ricard and Cucho-Venegas, Jorge M and Dahlqvist, Solbritt Rantapaa and D'Alfonso, Sana and Da Silva, Berta Martins and de la Rua Figueroa, Inigo and Doria, Anea and Edberg, Jeffrey C and Eneffy, Emoke and Esquivel-Valerio, Jorge A and Fortin, Paul R and Freedman, Barry I and Frostegard, Johan and Garcia, Mercedes A and Garcia de la Torre, Ignacio and Gilkeson, Gary S and Gladman, Dafna D and Gunnarsson, Iva and Guthridge, Joel M and Huggins, Jennifer L and James, Judith A and Kallenberg, Cees G. M and Kamen, Diane L and Karp, David R and Kaufman, Kenneth M and Kottyan, Leah C and Kovacs, Laszlo and Laustrup, Helle and Lauwerys, Bernard R and Li, Quan-Zhen and Maradiaga-Cecena, Marco A and Martin, Javier and McCune, Joseph M and McWilliams, David R and Merrill, Joan T and Miranda, Peo and Moctezuma, Jose F and Nath, Swapan K and Niewold, Timothy B and Orozco, Lorena and Ortego-Centeno, Norberto and Petri, Michelle and Pineau, Christian A and Pons-Estel, Bernardo A and Pope, Janet and Raj, Prithvi and Ramsey-Goldman, Rosalind and Reveille, John D and Russell, Laurie P and Sabio, Jose M and Aguilar-Salinas, Carlos A and Scherbarth, Hugo R and Scorza, Raffaella and Seldin, Michael F and Sjowall, Christopher and Svenungsson, Elisabet and Thompson, Susan D and Toloza, Sergio M. A and Truedsson, Lennart and Tusie-Luna, Teresa and Vasconcelos, Carlos and Vila, Luis M and Wallace, Daniel J and Weisman, Michael H and Wither, Joan E and Bhangale, Tushar and Oksenberg, Jorge R and Rioux, John D and Gregersen, Peter K and Syvanen, Ann-Christine and Ronnblom, Lars and Criswell, Lindsey A and Jacob, Chaim O and Sivils, Kathy L and Tsao, Betty P and Schanberg, Laura E and Behrens, Timothy W and ... and Avdelningen för neuro- och inflammationsvetenskap and Medicinska fakulteten and Region Östergötland and Linköpings universitet and Institutionen för klinisk och experimentell medicin and Reumatologiska kliniken i Östergötland and Hjärt- och Medicincentrum
Nature Communications, ISSN 2041-1723, 07/2017, Volume 8, Issue 1, p. 16021
Systemic lupus erythematosus (SLE) is an autoimmune disease with marked gender and ethnic disparities. We report a large transancestral association study of... 
RHEUMATOID-ARTHRITIS | PATHOGENESIS | REVISED CRITERIA | MULTIDISCIPLINARY SCIENCES | SHARED EPITOPE HYPOTHESIS | DISEASE | SUSCEPTIBILITY LOCI | RISK | CLASSIFICATION | HLA | GENOME-WIDE ASSOCIATION | Sequence Deletion | European Continental Ancestry Group - genetics | Hispanic Americans - genetics | Humans | Logistic Models | HLA Antigens - genetics | American Native Continental Ancestry Group - genetics | Multifactorial Inheritance | Case-Control Studies | Genetic Load | Lupus Erythematosus, Systemic - genetics | Age of Onset | Mutagenesis, Insertional | Polymorphism, Single Nucleotide | African Continental Ancestry Group - genetics | Case studies | Lupus eritematós | Malalties autoimmunitàries | Estudi de casos | Lupus erythematosus | Genètica humana | Autoimmune diseases | Human genetics | Basic Medicine | Medical Genetics | Medicinsk genetik | Medical and Health Sciences | Medicin och hälsovetenskap | Medicinska och farmaceutiska grundvetenskaper
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15. Full Text An introduction to epitope mapping
by Nilvebrant, Johan and Rockberg, Johan and Albanova VinnExcellence Center for Protein Technology, ProNova and Proteinteknologi and Centra and Skolan för bioteknologi (BIO) and Proteinvetenskap and KTH and Skolan för kemi, bioteknologi och hälsa (CBH)
Methods in Molecular Biology, ISSN 1064-3745, 2018, Volume 1785, pp. 1 - 10
Antibodies are protein molecules used routinely for therapeutic, diagnostic, and research purposes due to their exquisite ability to selectively recognize and... 
Antigen | Epitope | Mutagenesis | Antibody | Prediction | Epitope mapping | Peptide | Structural biology | Antibodies, Monoclonal - genetics | Computational Biology - methods | Epitopes, B-Lymphocyte - genetics | Humans | Peptides - immunology | Peptides - genetics | Antigens - immunology | Epitope Mapping - methods | Epitopes, B-Lymphocyte - immunology | High-Throughput Nucleotide Sequencing - methods | Antibodies, Monoclonal - immunology | Antigens - genetics | Biological Sciences | antigen antibody complex | computer model | antigen structure | Naturvetenskap | Biokemi och molekylärbiologi | Biologiska vetenskaper | high throughput screening | Biochemistry and Molecular Biology | Natural Sciences | human
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16. Full Text Epitope Mapping: The First Step in Developing Epitope-Based Vaccines
by Gershoni, Jonathan M and Roitburd-Berman, Anna and Siman-Tov, Dror D and Natalia Tarnovitski Freund and Weiss, Yael
BioDrugs, ISSN 1173-8804, 2007, Volume 21, Issue 3, pp. 145 - 156
Antibodies are an effective line of defense in preventing infectious diseases. Highly potent neutralizing antibodies can intercept a virus before it attaches... 
Research and development | Vaccine optimisation technologies | Vaccines | Antibodies | Pharmacotherapy | Cancer Research | Molecular Medicine | Biomedicine | RANDOM MUTAGENESIS | GP120 ENVELOPE GLYCOPROTEIN | BUNGAROTOXIN BINDING-SITE | IMMUNOLOGY | ALPHA-BUNGAROTOXIN | NEUTRALIZING EPITOPE | SUBUNIT VACCINE | ONCOLOGY | NICOTINIC ACETYLCHOLINE-RECEPTOR | PROTEIN-PROTEIN INTERACTIONS | PHARMACOLOGY & PHARMACY | MOLECULAR MIMICRY | PHAGE-DISPLAY LIBRARIES | Humans | Models, Molecular | Vaccines - immunology | Epitopes - genetics | Genetic Techniques | Epitopes - immunology | Antibodies, Monoclonal - genetics | Vaccines - genetics | Animals | B-Lymphocytes - immunology | Combinatorial Chemistry Techniques | Mutagenesis | Epitope Mapping - methods | Antibodies, Monoclonal - immunology
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