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1. Full Text Spreading of Heterochromatin Is Limited to Specific Families of Maize Retrotransposons
by Eichten, Steven R and Ellis, Nathanael A and Makarevitch, Irina and Yeh, Cheng-Ting and Gent, Jonathan I and Guo, Lin and McGinnis, Karen M and Zhang, Xiaoyu and Schnable, Patrick S and Vaughn, Matthew W and Dawe, R. Kelly and Springer, Nathan M
PLoS Genetics, ISSN 1553-7390, 12/2012, Volume 8, Issue 12, p. e1003127
Transposable elements (TEs) have the potential to act as controlling elements to influence the expression of genes and are often subject to heterochromatic... 
PARAMUTATION | SMALL RNAS | EVOLUTION | DNA METHYLATION | GENE | GENETICS & HEREDITY | TRANSPOSABLE ELEMENTS | ENRICHMENT | JUNK DNA | EXPRESSION | GENOME | Zea mays - genetics | Heterochromatin - genetics | Histones - genetics | Base Sequence | Gene Expression Regulation, Plant | Gene Silencing | DNA Methylation - genetics | Genome, Plant | Histones - metabolism | Zea mays - metabolism | Sequence Analysis, DNA | Retroelements - genetics | Retrotransposons | Chromatin | Plant genetics | Physiological aspects | Corn | Genetic aspects | Research | Health aspects | DNA methylation | Genetics | Heterochromatin | Genomes | Deoxyribonucleic acid--DNA | Classification | Deoxyribonucleic acid | DNA
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2. Full Text Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila
by Caizzi, Ruggiero and Moschetti, Roberta and Piacentini, Lucia and Fanti, Laura and Marsano, Renè Massimiliano and Dimitri, Patrizio
PLoS Genetics, ISSN 1553-7390, 08/2016, Volume 12, Issue 8, p. e1006212
The term heterochromatin has been long considered synonymous with gene silencing, but it is now clear that the presence of transcribed genes embedded in... 
MOLECULAR CHARACTERIZATION | SALIVARY-GLAND CHROMOCENTER | MELANOGASTER HETEROCHROMATIN | DNA-SEQUENCES | GENETIC-ANALYSIS | Y-CHROMOSOME | GENETICS & HEREDITY | TRANSPOSABLE ELEMENTS | CHROMOSOMAL REARRANGEMENT | HP1 | CENTROMERIC HETEROCHROMATIN | Multigene Family | Species Specificity | Genomics | Molecular Sequence Annotation | Chromosome Mapping | Chromosomal Proteins, Non-Histone - genetics | Animals | Heterochromatin - genetics | Comparative Genomic Hybridization | Epigenesis, Genetic - genetics | Genome, Insect | Euchromatin - genetics | Drosophila - genetics | Evolution, Molecular | Physiological aspects | Chromatin | Genetic aspects | Gene expression | Observations | Drosophila | Proteins | Studies | Heterochromatin | Cellular biology | Insects | Genes | Epigenetics | Evolution | Genomes | Chromosomes
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3. Full Text Heterochromatin and genetic conflict
by Colin D. Meiklejohn
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 4/2016, Volume 113, Issue 15, pp. 3915 - 3917
COMMENTARY | UNISEXUAL STERILITY | EXPLANATION | Y-CHROMOSOME | EVOLUTION | SEX-RATIO | DROSOPHILA-SIMULANS | MULTIDISCIPLINARY SCIENCES | SUPPRESSION | RATIO MEIOTIC DRIVE | MELANOGASTER | EXPRESSION | Heterochromatin | Animals | Drosophila melanogaster - genetics | Humans | Physiological aspects | Chromatin | Meiosis | Observations | Biological Sciences | Commentaries
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4. Full Text Functional divergence of a heterochromatin‐binding protein during stickleback speciation
by Yoshida, Kohta and Ishikawa, Asano and Toyoda, Atsushi and Shigenobu, Shuji and Fujiyama, Asao and Kitano, Jun
Molecular Ecology, ISSN 0962-1083, 03/2019, Volume 28, Issue 6, pp. 1563 - 1578
Intragenomic conflict, the conflict of interest between different genomic regions within an individual, is proposed as a mechanism driving both the rapid... 
selfish gene | subfunctionalization | ubiquitination | centromere drive | meiotic drive | SPAWNING MIGRATION | PHYLOGENETIC ANALYSIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSPOSABLE ELEMENTS | PURIFYING SELECTION | CENTROMERIC HISTONE H3 | EVOLUTIONARY BIOLOGY | GENE-EXPRESSION | EPIGENETIC REGULATION | JAPAN SEA | ECOLOGY | THREESPINE STICKLEBACK | REPRODUCTIVE ISOLATION | Proteins | Chromosomes | Analysis | Protein binding | Incompatibility | Hybrids | Divergence | Transposons | Genes | Positive selection | Abnormalities | Biological evolution | Centromeres | Gene expression | Sterility | Histone H4 | Heterochromatin | Lysine | Conflicts of interest | Male sterility | Testes | Methylation | Speciation
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5. Full Text A heterochromatin-dependent transcription machinery drives piRNA expression
by Andersen, Peter Refsing and Tirian, Laszlo and Vunjak, Milica and Brennecke, Julius
Nature, ISSN 0028-0836, 09/2017, Volume 549, Issue 7670, pp. 54 - 59
Nuclear small RNA pathways safeguard genome integrity by establishing transcription-repressing heterochromatin at transposable elements. This inevitably also... 
RNA-POLYMERASE-II | YEAST TFIIA/TBP/DNA COMPLEX | DROSOPHILA-MELANOGASTER | TBP-LIKE FACTOR | CRYSTAL-STRUCTURE | MULTIDISCIPLINARY SCIENCES | GENE-EXPRESSION | C-ELEGANS | POL II | MICE LACKING | GENOME BROWSER | Multigene Family - genetics | RNA, Small Interfering - genetics | Chromosomal Proteins, Non-Histone - metabolism | Gene Silencing | RNA Polymerase II - metabolism | Drosophila Proteins - metabolism | Drosophila melanogaster - genetics | Promoter Regions, Genetic - genetics | Heterochromatin - chemistry | Animals | Heterochromatin - genetics | Heterochromatin - metabolism | RNA, Small Interfering - biosynthesis | DNA Transposable Elements - genetics | Female | Telomeric Repeat Binding Protein 2 - metabolism | Transcription, Genetic | Transcription Initiation, Genetic | RNA Polymerase II - chemistry | Transcription Factor TFIIA - metabolism | RNA | Genomics | Drosophila | Physiological aspects | Genetic research | Genetic aspects | Genetic transcription | Research | Methods | Transcription factors | Complex formation | Genomes | Biosynthesis | DNA-directed RNA polymerase | Proteins | Heterochromatin | DNA methylation | Clusters | Evolution | Deoxyribonucleic acid--DNA | Initiation complex | Telomere-binding protein | Transposons | Nucleotide sequence | RNA polymerase | Gene expression | Loci | Polymerase | TATA-binding protein | Ribonucleic acids | Insects | TFIID protein | TRF2 protein | Gene loci | Transcription initiation factor TFIIA | Gonads | RNA polymerase II
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6. Full Text 5-Methylcytosine-Rich Heterochromatin in Reptiles
by Schmid, Michael and Steinlein, Claus and Reiter, Alina M and Rovatsos, Michail and Altmanová, Marie and Mazzoleni, Sofia and Johnson Pokorná, Martina and Kratochvíl, Lukáš
Cytogenetic and Genome Research, ISSN 1424-8581, 2019, Volume 157, Issue 1-2, pp. 53 - 64
An experimental approach using monoclonal anti-5-methylcytosine antibodies and indirect immunofluorescence was elaborated for detecting 5-methylcytosine-rich... 
Turtles | Heterochromatin | Hypermethylation | Indirect immunofluorescence | Squamates | 5-Methylcytosine | ANTIBODIES | PHYLOGENY | SEQUENCES | SEX-DETERMINING MECHANISMS | CELL BIOLOGY | CHROMOSOME EVOLUTION | DNA | REGIONS | GENES | GENETICS & HEREDITY
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7. Full Text Silencing of endogenous retroviruses by heterochromatin
by Groh, Sophia and Schotta, Gunnar
Cellular and Molecular Life Sciences, ISSN 1420-682X, 06/2017, Volume 74, Issue 11, pp. 2055 - 2065
Endogenous retroviruses (ERV) are an abundant class of repetitive elements in mammalian genomes. To ensure genomic stability, ERVs are largely... 
Retrotransposons | TEs | Atrx | H3K9me3 | Setdb1 | Trim28 | Daxx | ERV restriction | Transposable elements | DNA METHYLATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | MALE GERM-CELLS | PERICENTRIC HETEROCHROMATIN | CELL BIOLOGY | GENOME EVOLUTION | EMBRYONIC STEM-CELLS | MOUSE OOCYTES | ZINC-FINGER PROTEIN | HISTONE METHYLTRANSFERASE ESET | NEURAL PROGENITOR CELLS | Animals | Heterochromatin - metabolism | Models, Biological | Humans | Gene Silencing | Chromatin Assembly and Disassembly | Endogenous Retroviruses - genetics | Retroelements - genetics | Animal genetics | Cellular proteins | DNA replication | Transposons | Retroviruses | Genomics | Genetic transcription | Methylation | DNA methylation | Viruses | Chromatin | Genomes | Mammals
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8. Full Text Plant Nuclear RNA Polymerase IV Mediates siRNA and DNA Methylation-Dependent Heterochromatin Formation
by Onodera, Yasuyuki and Haag, Jeremy R and Ream, Thomas and Nunes, Pedro Costa and Pontes, Olga and Pikaard, Craig S
Cell, ISSN 0092-8674, 2005, Volume 120, Issue 5, pp. 613 - 622
All eukaryotes have three nuclear DNA-dependent RNA polymerases, namely, Pol I, II, and III. Interestingly, plants have catalytic subunits for a fourth nuclear... 
ARABIDOPSIS-THALIANA | METHYLTRANSFERASES | HOLOENZYME | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION | PURIFICATION | RESOLUTION | GENES | CHROMOSOMES | ARGONAUTE4 | DRM | CELL BIOLOGY | tRNA Methyltransferases - metabolism | RNA, Small Interfering - genetics | Arabidopsis Proteins - genetics | Arabidopsis - enzymology | Catalytic Domain - genetics | Molecular Sequence Data | DNA-Directed RNA Polymerases - genetics | Phylogeny | Mutation - genetics | Protein Subunits - metabolism | Cell Nucleus - enzymology | Arabidopsis - genetics | Arabidopsis Proteins - metabolism | DNA Methylation | Heterochromatin - genetics | Cell Nucleus - genetics | Heterochromatin - enzymology | DNA-Directed RNA Polymerases - metabolism | Evolution, Molecular | Protein Subunits - genetics | RNA, Small Interfering - metabolism
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9. Full Text Heterochromatin and RNAi regulate centromeres by protecting CENP-A from ubiquitin-mediated degradation
by Yang, Jinpu and Sun, Siyu and Zhang, Shu and Gonzalez, Marlyn and Dong, Qianhua and Chi, Zhongxuan and Chen, Yu-Hang and Li, Fei
PLoS Genetics, ISSN 1553-7390, 08/2018, Volume 14, Issue 8, p. e1007572
Centromere is a specialized chromatin domain that plays a vital role in chromosome segregation. In most eukaryotes, centromere is surrounded by the... 
HISTONE H3 VARIANT | FISSION YEAST | PROTEIN-A | ECTOPIC LOCALIZATION | BUDDING YEAST | GENETICS & HEREDITY | CELL-CYCLE | 26S PROTEASOME | SACCHAROMYCES-CEREVISIAE | TARGETING DOMAIN | DNA-REPLICATION | Ubiquitin | Chromatin | Centromeres | Physiological aspects | Genetic aspects | Observations | Genetic regulation | Biodegradation | Yeast | Developmental biology | RNA-mediated interference | Proteins | Heterochromatin | Ubiquitination | Insects | Cell cycle | DNA methylation | Epigenetics | Evolution | Genetics | Localization | Chromosomes | Deoxyribonucleic acid--DNA | Histone H3 | Deoxyribonucleic acid | DNA
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10. Full Text Evolutionary implications of heterochromatin and rDNA in chromosome number and genome size changes during dysploidy: A case study in Reichardia genus
by Siljak-Yakovlev, Sonja and Godelle, Bernard and Zoldos, Vlatka and Vallès, Joan and Garnatje, Teresa and Hidalgo, Oriane
PloS one, ISSN 1932-6203, 2017, Volume 12, Issue 8, p. e0182318
In this study we showed that constitutive heterochromatin, GC-rich DNA and rDNA are implicated in chromosomal rearrangements during the basic chromosome number... 
RECOMBINATION | NUCLEAR-DNA CONTENT | SATELLITE DNA | HIGHER-PLANTS | MULTIDISCIPLINARY SCIENCES | IN-SITU HYBRIDIZATION | BASE COMPOSITION | SELFISH DNA | ARTEMISIA ASTERACEAE | FAMILY ASTERACEAE | RIBOSOMAL-RNA GENES | Genome Size - genetics | Heterochromatin - genetics | Genome, Plant - genetics | DNA, Plant - analysis | Asteraceae - genetics | In Situ Hybridization, Fluorescence | Chromosome Mapping | Phylogeny | Asteraceae - classification | DNA, Ribosomal - genetics | Evolution, Molecular | Chromatin | Genetic variation | Physiological aspects | Genomes | Research | Recombinant DNA | Structure | Correlation | Polyploidy | Chromosome number | Fluorescence | Biology | Chromosome rearrangements | Loci | Case studies | Reduction | Heterochromatin | Morphology | Phylogenetics | Evolution | Pollen | Flowers & plants | Mutation | Differentiation | Chromosomes | Deoxyribonucleic acid--DNA | Crystal structure | Heterocromatina | Pol·len | Evolutionary genetics | Genètica evolutiva | Deoxyribonucleic acid | DNA
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11. Full Text Species-specific heterochromatin prevents mitotic chromosome segregation to cause hybrid lethality in Drosophila
by Ferree, Patrick M and Barbash, Daniel A
PLoS Biology, ISSN 1544-9173, 10/2009, Volume 7, Issue 10, pp. e1000234 - e1000234
Postzygotic reproductive barriers such as sterility and lethality of hybrids are important for establishing and maintaining reproductive isolation between... 
SATELLITE DNA | TOPOISOMERASE-II | PROTEIN | RESCUE ZHR | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOLOGY | TRANSPOSABLE ELEMENTS | CELL-CYCLE | STERILITY | REPRODUCTIVE ISOLATION GENE | MELANOGASTER | REPETITIVE DNA | Genes, Insect | DNA Topoisomerases, Type II - metabolism | Species Specificity | Mitosis | Male | X Chromosome - metabolism | Genes, Lethal | Animals | Heterochromatin - genetics | Heterochromatin - metabolism | Hybridization, Genetic - genetics | Genetic Speciation | DNA, Satellite - genetics | Drosophila - embryology | Female | X Chromosome - genetics | Chromosome Segregation - genetics | DNA, Satellite - metabolism | Drosophila - genetics | DNA topoisomerase (ATP-hydrolysing) | Chromatin | Hybrids | Reproductive isolation | Nucleotide sequence | Transcription | X chromosome | Y chromosome | Chromosome deletion | Lethality | Sterility | Chromosome translocations | Embryogenesis | Heterochromatin | Satellites | Chromatids | DNA | Repeated DNA sequences | Gene mapping | Chromosomes | Cytoplasm | Speciation | Proteins | Genetics | Evolution
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