X
Search Filters
Format Format
Format Format
X
Sort by Item Count (A-Z)
Filter by Count
Journal Article (1230) 1230
Publication (159) 159
Conference Proceeding (30) 30
Book Chapter (19) 19
Book Review (18) 18
Dissertation (12) 12
Government Document (2) 2
more...
Subjects Subjects
Subjects Subjects
X
Sort by Item Count (A-Z)
Filter by Count
fold recognition (881) 881
biochemistry & molecular biology (651) 651
models, molecular (517) 517
proteins - chemistry (499) 499
amino acid sequence (429) 429
protein folding (404) 404
index medicus (403) 403
protein conformation (376) 376
algorithms (365) 365
biophysics (331) 331
molecular sequence data (324) 324
proteins (305) 305
protein structure, secondary (274) 274
sequence alignment (264) 264
structure prediction (241) 241
database (236) 236
computational biology - methods (224) 224
software (222) 222
protein structure, tertiary (221) 221
secondary structure (218) 218
databases, protein (212) 212
protein structure prediction (206) 206
sequence (201) 201
humans (197) 197
biochemical research methods (193) 193
biotechnology & applied microbiology (190) 190
protein fold recognition (184) 184
sequence homology, amino acid (182) 182
computer simulation (173) 173
fold-recognition (173) 173
alignment (164) 164
mathematical & computational biology (162) 162
biology (153) 153
analysis (143) 143
animals (139) 139
classification (138) 138
prediction (135) 135
sequence alignment - methods (132) 132
protein-structure prediction (131) 131
bioinformatics (123) 123
computational biology (123) 123
sequence analysis, protein - methods (119) 119
crystal-structure (117) 117
models (113) 113
article (109) 109
secondary structure prediction (105) 105
hidden markov-models (104) 104
threading (104) 104
sequences (98) 98
amino acids (92) 92
computer science, interdisciplinary applications (91) 91
globular-proteins (91) 91
neural networks (91) 91
accuracy (88) 88
protein structure (88) 88
identification (86) 86
information (83) 83
research (81) 81
research article (81) 81
binding sites (79) 79
support vector machines (79) 79
homology (77) 77
models, chemical (76) 76
proteins - genetics (76) 76
molecular biology (75) 75
genomics (74) 74
protein binding (74) 74
server (74) 74
cell biology (72) 72
databases, factual (72) 72
amino acids - chemistry (71) 71
mean force (71) 71
protein (71) 71
profiles (69) 69
psi-blast (69) 69
biochemistry (68) 68
homology modeling (67) 67
sequence analysis, protein (67) 67
thermodynamics (67) 67
3-dimensional structure (66) 66
structure (65) 65
evolution, molecular (64) 64
internet (63) 63
reproducibility of results (62) 62
models, statistical (61) 61
potentials (61) 61
proteins - metabolism (61) 61
structural homology, protein (59) 59
data-bank (56) 56
methods (56) 56
algorithm (55) 55
artificial intelligence (54) 54
energy functions (53) 53
structural genomics (52) 52
support vector machine (51) 51
chemistry, multidisciplinary (50) 50
genome (50) 50
recognition (50) 50
escherichia-coli (49) 49
genetics & heredity (48) 48
more...
Language Language
Language Language
X
Sort by Item Count (A-Z)
Filter by Count
English (1266) 1266
Chinese (8) 8
Japanese (1) 1
Korean (1) 1
Portuguese (1) 1
Swedish (1) 1
Turkish (1) 1
more...
Publication Date Publication Date
Click on a bar to filter by decade
Slide to change publication date range


Nucleic acids research, ISSN 0305-1048, 2015, Volume 43, Issue 1, pp. W389 - W394
JPred4 (http://www.compbio.dundee.ac.uk/jpred4) is the latest version of the popular JPred protein secondary structure prediction server which provides... 
FOLD-RECOGNITION | PROFILES | DATABASE | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | 3-DIMENSIONAL STRUCTURES | ACCURACY | Software | Algorithms | Internet | Protein Structure, Secondary | Solvents - chemistry | Web Server issue
Journal Article
Journal of Molecular Biology, ISSN 0022-2836, 06/2000, Volume 299, Issue 2, pp. 501 - 522
A method (three-dimensional position-specific scoring matrix, 3D-PSSM) to recognise remote protein sequence homologues is described. The method combines the... 
genome | threading | structure prediction | fold recognition | bioinformatics | Structure prediction | Fold recognition | Genome | Threading | Bioinformatics
Journal Article
Journal of Machine Learning Research, ISSN 1532-4435, 07/2011, Volume 12, pp. 2211 - 2268
In recent years, several methods have been proposed to combine multiple kernels instead of using a single one. These different kernels may correspond to using... 
Support vector machines | Multiple kernel learning | Kernel machines | support vector machines | PROTEIN FOLD RECOGNITION | CLASSIFICATION | COMBINATION | COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE | DATA FUSION | kernel machines | multiple kernel learning | INTEGRATION | MATRICES | SEQUENCE | FRAMEWORK | SUPPORT VECTOR MACHINE | AUTOMATION & CONTROL SYSTEMS
Journal Article
Nucleic acids research, ISSN 0305-1048, 2013, Volume 41, Issue W1, pp. W349 - 357
Here, we present the new UCL Bioinformatics Group's PSIPRED Protein Analysis Workbench. The Workbench unites all of our previously available analysis methods... 
BIOCHEMISTRY & MOLECULAR BIOLOGY | PREDICTION | Sequence Analysis, Protein | Animals | Membrane Proteins - chemistry | Protein Conformation | Mice | Software | Structural Homology, Protein | Internet | Proteins - chemistry
Journal Article
Nature Protocols, ISSN 1754-2189, 08/2012, Volume 7, Issue 8, pp. 1511 - 1522
Journal Article
Journal of Artificial Intelligence Research, ISSN 1076-9757, 07/2004, Volume 22, pp. 385 - 421
This paper is concerned with algorithms for prediction of discrete sequences over a finite alphabet,using variable order Markov models. The class of such... 
PROBABILISTIC-AUTOMATA | FAMILIES | INFORMATION | PROTEIN FOLD RECOGNITION | CLASSIFICATION | INDIVIDUAL SEQUENCES | GLOBULAR-PROTEINS | COMPRESSION | PPM | REDUNDANCY | COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE | Computer Science - Artificial Intelligence
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 7/2009, Volume 37, Issue suppl_2, pp. W510 - W514
Model quality estimation is an essential component of protein structure prediction, since ultimately the accuracy of a model determines its usefulness for... 
PROQ | PROFILES | ALIGNMENT | MEAN FORCE | STABILITY | BIOCHEMISTRY & MOLECULAR BIOLOGY | PCONS | REGIONS | WORKSPACE | FOLD RECOGNITION | STRUCTURE PREDICTION | Models, Molecular | User-Computer Interface | Protein Conformation | Reproducibility of Results | Software
Journal Article
Nature Protocols, ISSN 1754-2189, 02/2009, Volume 4, Issue 3, pp. 363 - 371
Determining the structure and function of a novel protein is a cornerstone of many aspects of modern biology. Over the past decades, a number of computational... 
FOLD-RECOGNITION | PROFILES | DATABASE | MACROMOLECULES | SEQUENCE | BIOCHEMICAL RESEARCH METHODS | SECONDARY STRUCTURE | COMPUTATION | ANALYTICAL SHAPE | Point Mutation | Sequence Deletion | Computational Biology - methods | Models, Molecular | Protein Conformation | Mutagenesis, Insertional | Internet | Proteins | Protein research | Usage | File servers | Research | Web sites | Structure | Methods | Index Medicus
Journal Article
Biophysical Journal, ISSN 0006-3495, 10/2011, Volume 101, Issue 8, pp. 2043 - 2052
An accurate scoring function is a key component for successful protein structure prediction. To address this important unsolved problem, we develop a... 
FOLD-RECOGNITION | SCORING FUNCTION | REFINEMENT | BURIAL | ENERGY | BIOPHYSICS | SEGMENTS | MEAN FORCE | TERTIARY STRUCTURES | ABSOLUTE QUALITY | RESIDUES | Thermodynamics | Computational Biology - methods | Models, Statistical | Proteins - chemistry | Protein
Journal Article
Bioinformatics, ISSN 1367-4803, 2017, Volume 33, Issue 17, pp. 2756 - 2758
A Summary: Evolutionary information in the form of a Position-Specific Scoring Matrix (PSSM) is a widely used and highly informative representation of protein... 
INFORMATION | BIOCHEMICAL RESEARCH METHODS | PROTEIN FOLD RECOGNITION | PSI-BLAST | FUNCTION PREDICTION | MODES | STRUCTURAL CLASS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | MATHEMATICAL & COMPUTATIONAL BIOLOGY | LOW-SIMILARITY SEQUENCES | AMINO-ACID-COMPOSITION | WEB SERVER | SCORING MATRIX
Journal Article