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BioMed Research International, ISSN 2314-6133, 2014, Volume 2014, pp. 256723 - 8
Journal Article
BioData Mining, ISSN 1756-0381, 08/2014, Volume 7, Issue 1, pp. 16 - 16
Background: Advances in genomic technologies have enabled the accumulation of vast amount of genomic data, including gene expression data for multiple species... 
Mining | Biological networks | Frequent subnetworks | Coexpression | Hybrid similarity | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Mineral industry | Mining industry | Proteins | Graphs | Algorithms | Gene expression | Methods
Journal Article
2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 11/2017, Volume 2017-, pp. 1736 - 1740
Mining multiple gene coexpressions networks allows for identifying context-specific modules, and improving biological function prediction. Frequent subnetworks... 
Algorithm design and analysis | Proteins | Computer science | graphs | subgraphs | Biological processes | frequent | Approximation algorithms | Gene expression | coexpression
Conference Proceeding
2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 11/2017, Volume 2017-, pp. 1731 - 1735
Algorithms that map graphs into feature vectors encoding the presence/absence of specific subgraphs, have shown excellent performance in various data mining... 
Computer science | Greedy algorithms | discriminative patterns | graph classification | Feature extraction | Gene expression | Data mining | frequent subgraphs | Kernel | Coexpression networks
Conference Proceeding
Nucleic Acids Research, ISSN 0305-1048, 02/2019, Volume 47, Issue 3, pp. 1255 - 1267
Abstract As the second most common malignant bone tumor in children and adolescents, Ewing sarcoma is initiated and exacerbated by a chimeric oncoprotein, most... 
ELEMENTS | PATHWAY | BIOCHEMISTRY & MOLECULAR BIOLOGY | CELL IDENTITY | FREQUENT COEXPRESSION | HOX GENES | LEUKEMIA | MLL | UP-REGULATION | EXPRESSION | CANCER | Gene regulation, Chromatin and Epigenetics
Journal Article
Genes and Development, ISSN 0890-9369, 11/2007, Volume 21, Issue 21, pp. 2762 - 2774
Journal Article
Journal of Neuroscience, ISSN 0270-6474, 01/2018, Volume 38, Issue 5, pp. 1277 - 1294
Cerebellar granule cell precursors (GCPs) and granule cells (GCs) represent good models to study neuronal development. Here, we report that the transcription... 
Cerebellum | Granule cell | Meis1 | Differentiation | Developmental biology | Atoh1 | differentiation | PROTEIN | developmental biology | NEUROBLASTOMA | NEURAL PRECURSORS | MAMMALIAN-CELLS | NEUROSCIENCES | cerebellum | granule cell | GENETIC-REGULATION | HOMEOBOX GENES | MYELOID LEUKEMIAS | FREQUENT COEXPRESSION | EXPRESSION | MEDULLOBLASTOMA | Cell Cycle - genetics | Phosphorylation | Male | PAX6 Transcription Factor - genetics | Cell Differentiation - genetics | Bone Morphogenetic Proteins - biosynthesis | Female | Bone Morphogenetic Proteins - genetics | Cell Differentiation - physiology | Basic Helix-Loop-Helix Transcription Factors - physiology | Basic Helix-Loop-Helix Transcription Factors - genetics | Cytoplasmic Granules | Signal Transduction - genetics | Mice, Inbred ICR | Mice, Knockout | Pregnancy | Animals | Myeloid Ecotropic Viral Integration Site 1 Protein - physiology | Cerebellum - cytology | Cell Cycle - physiology | Cerebellum - growth & development | Signal Transduction - physiology | Mice | Smad Proteins - metabolism | Astrocytes - metabolism | PAX6 Transcription Factor - biosynthesis | Molecular machines | Smad protein | Animal models | Astrocytes | Granule cells | Homology | Proteins | Degradation | Pax6 protein | Signaling | MEIS1 gene | Granular materials | Morphology | Neural stem cells | Bone morphogenetic proteins | Index Medicus
Journal Article
Translational Oncology, ISSN 1936-5233, 2017, Volume 10, Issue 4, pp. 469 - 475
Abstract BACKGROUND: FGFR2 amplification is associated with aggressive gastric cancer (GC), and targeted drugs have been developed for treatment of GC. We... 
Oncology | PROGNOSTIC FACTORS | TUMOR XENOGRAFTS | COEXPRESSION | FREQUENT | ONCOLOGY | STATISTICS | PERITONEAL CARCINOMATOSIS | GENE AMPLIFICATION | MUTATIONS | INHIBITOR | FGFR2
Journal Article
MOLECULAR ONCOLOGY, ISSN 1574-7891, 12/2013, Volume 7, Issue 6, pp. 1069 - 1082
MLL (mixed-lineage leukemia)-fusion genes induce the development of leukemia through deregulation of normal MLL target genes, such as HOXA9 and MEIS1. Both... 
C-MYC | SELF-RENEWAL | FUSION GENE | p27(kip1) | Quiescence | MEIS1 | ONCOLOGY | Leukemia stem cell | REARRANGED LEUKEMIA | DNA | MLL-leukemia | GENE-EXPRESSION | FREQUENT COEXPRESSION | HOX EXPRESSION | TRANSCRIPTIONAL REGULATION
Journal Article
Journal Article
Developmental Biology, ISSN 0012-1606, 2005, Volume 280, Issue 2, pp. 307 - 320
Homeodomain proteins of the Meis subfamily are expressed dynamically in several organs during embryogenesis and exert potent regulatory activity through their... 
Homeobox | Mouse | Hematopoiesis | Runx1 | Hematopoietic stem cells | AGM | STEM-CELLS | homeobox | DEVELOPMENTAL BIOLOGY | ACUTE MYELOID-LEUKEMIA | HOMEOBOX GENES | mouse | hematopoiesis | IN-VITRO | HOXA9 | FREQUENT COEXPRESSION | DIFFERENTIATION | hematopoietic stem cells | TRANSCRIPTION FACTOR | FETAL LIVER | EXPRESSION | Blotting, Southern | Homeodomain Proteins - metabolism | Neoplasm Proteins - physiology | Stem Cells - cytology | Aorta - metabolism | Neoplasm Proteins - metabolism | Liver - embryology | Mesonephros - metabolism | Embryo, Mammalian - metabolism | DNA-Binding Proteins - metabolism | Flow Cytometry | Time Factors | Mice, Mutant Strains | Core Binding Factor Alpha 2 Subunit | Transcription, Genetic | Megakaryocytes - cytology | Megakaryocytes - metabolism | Proto-Oncogene Proteins - metabolism | Cell Separation | Mice, Transgenic | Hematopoietic Stem Cells - metabolism | Blotting, Western | Transcription Factors - metabolism | Cell Lineage | Phenotype | Animals | Hematopoietic Stem Cells - cytology | Umbilical Arteries - cytology | Heterozygote | Mesoderm - metabolism | Mice | Models, Genetic | Mutation | Myeloid Ecotropic Viral Integration Site 1 Protein | Homeodomain Proteins - physiology | Platelet Membrane Glycoprotein IIb - metabolism | Microscopy, Fluorescence | Neovascularization, Physiologic | Genetic aspects | Research | Developmental biology
Journal Article
Journal Article
Journal Article
Chinese Journal of Electronics, ISSN 1022-4653, 10/2012, Volume 21, Issue 4, pp. 657 - 662
Mining coexpression clusters across multiple datasets is a major approach for identifying transcription modules in systems biology. The main difficulty of this... 
Frequent dense vertex sets | Clustering | Summary graph | Coexpression networks | NETWORKS | ENGINEERING, ELECTRICAL & ELECTRONIC
Journal Article