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1. Full Text Genome-wide Analysis Identifies Bcl6-Controlled Regulatory Networks during T Follicular Helper Cell Differentiation
by Liu, Xindong and Lu, Huiping and Chen, Tingting and Nallaparaju, Kalyan C and Yan, Xiaowei and Tanaka, Shinya and Ichiyama, Kenji and Zhang, Xia and Zhang, Li and Wen, Xiaofeng and Tian, Qiang and Bian, Xiu-wu and Jin, Wei and Wei, Lai and Dong, Chen
Cell reports (Cambridge), ISSN 2211-1247, 02/2016, Volume 14, Issue 7, pp. 1735 - 1747
Life Sciences & Biomedicine | Science & Technology | Cell Biology | Cytosine - analogs & derivatives | 5-Methylcytosine - analogs & derivatives | Germinal Center - immunology | STAT5 Transcription Factor - immunology | Molecular Sequence Data | Gene Expression Profiling | Interleukins - genetics | STAT5 Transcription Factor - genetics | Receptors, Interleukin-7 - genetics | T-Lymphocytes, Helper-Inducer - immunology | Base Sequence | Interleukins - immunology | T-Lymphocytes, Helper-Inducer - cytology | Cell Differentiation | Interleukin-4 - genetics | Gene Regulatory Networks - immunology | Germinal Center - cytology | Receptors, Interleukin-7 - immunology | Macrophages - immunology | Cytosine - immunology | B-Lymphocytes - cytology | Genome-Wide Association Study | DNA-Binding Proteins - immunology | Signal Transduction | Gene Expression Regulation | Mice, Transgenic | Macrophages - cytology | DNA-Binding Proteins - genetics | Interleukin-4 - immunology | Animals | B-Lymphocytes - immunology | Mice | Proto-Oncogene Proteins c-bcl-6 | Index Medicus
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2. Full Text Network Integration of Parallel Metabolic and Transcriptional Data Reveals Metabolic Modules that Regulate Macrophage Polarization
by Jha, Abhishek K and Huang, Stanley Ching-Cheng and Sergushichev, Alexey and Lampropoulou, Vicky and Ivanova, Yulia and Loginicheva, Ekaterina and Chmielewski, Karina and Stewart, Kelly M and Ashall, Juliet and Everts, Bart and Pearce, Edward J and Driggers, Edward M and Artyomov, Maxim N
Immunity (Cambridge, Mass.), ISSN 1074-7613, 03/2015, Volume 42, Issue 3, pp. 419 - 430
Life Sciences & Biomedicine | Immunology | Science & Technology | Glutamine - deficiency | Aspartic Acid - immunology | Argininosuccinic Acid - immunology | Mitochondria - immunology | Chemokine CCL22 - immunology | Metabolic Networks and Pathways - immunology | Mitochondria - genetics | Argininosuccinic Acid - metabolism | Gene Regulatory Networks - immunology | Isocitrate Dehydrogenase - immunology | Macrophages - immunology | Uridine Diphosphate N-Acetylglucosamine - metabolism | Nitric Oxide - immunology | Macrophages - classification | Aspartate Aminotransferase, Mitochondrial - immunology | Interleukin-6 - genetics | Signal Transduction | Gene Expression Regulation | Isocitrate Dehydrogenase - genetics | Glycosylation | Mitochondria - metabolism | Macrophages - cytology | Immunity, Innate | Citric Acid Cycle | Uridine Diphosphate N-Acetylglucosamine - immunology | Chemokine CCL22 - genetics | Macrophages - metabolism | Metabolic Networks and Pathways - genetics | Animals | Interleukin-6 - immunology | Transcription, Genetic - immunology | Aspartic Acid - metabolism | Mice | Aspartate Aminotransferase, Mitochondrial - genetics | Nitric Oxide - metabolism | Enzymes | Tracers (Biology) | Analysis | Nitric oxide | Physiological aspects | Aspartate | Genetic aspects | Genetic transcription | Macrophages | Glutamine | Metabolites | Rodents | Scientific imaging | Metabolism | Labeling | Mass spectrometry | Index Medicus
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3. Full Text TLR4 and C5aR crosstalk in dendritic cells induces a core regulatory network of RSK2, PI3Kβ, SGK1, and FOXO transcription factors
by Zaal, Anouk and Nota, Benjamin and Moore, Kat S and Dieker, Miranda and van Ham, S Marieke and Ten Brinke, Anja
Journal of leukocyte biology, ISSN 0741-5400, 10/2017, Volume 102, Issue 4, pp. 1035 - 1054
Forkhead Box Protein O3/immunology | Phosphatidylinositol 3-Kinases/immunology | Protein-Serine-Threonine Kinases/immunology | Forkhead Box Protein O1/immunology | Ribosomal Protein S6 Kinases, 90-kDa/immunology | Humans | Immediate-Early Proteins/immunology | Receptor, Anaphylatoxin C5a/immunology | Signal Transduction/immunology | Dendritic Cells/immunology | Toll-Like Receptor 4/immunology | complement | IRF4 | LPS | C5a | Complement | Signal Transduction - immunology | Forkhead Box Protein O3 - immunology | Immediate-Early Proteins - immunology | Forkhead Box Protein O1 - immunology | Dendritic Cells - immunology | Receptor, Anaphylatoxin C5a - immunology | Protein-Serine-Threonine Kinases - immunology | Toll-Like Receptor 4 - immunology | Phosphatidylinositol 3-Kinases - immunology | Ribosomal Protein S6 Kinases, 90-kDa - immunology | FHL2 protein | Transcription factors | Glucocorticoids | Complement component C5a | Genes | Crosstalk | Leucine | Kinases | Gene sequencing | Lipopolysaccharides | Proteins | Receptors | FOXO1 protein | Down-regulation | Toll-like receptors | Forkhead protein | FOXO3 protein | Immune system | Pathogens | Interleukin 2 receptors | Sphingosine kinase | Dendritic cells | Immunoregulation | Inflammation | TLR4 protein | Gene expression | Ribonucleic acid--RNA | Leucine zipper proteins | Ribosomal protein S6 kinase | Signaling | Monocytes | Interferon regulatory factor 4 | Adrenergic receptors | Interferon | Index Medicus
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4. Full Text Post‐transcriptional regulatory networks in immunity
by Ivanov, Pavel and Anderson, Paul
Immunological reviews, ISSN 0105-2896, 05/2013, Volume 253, Issue 1, pp. 253 - 272
microRNAs | post‐transcriptional regulation | translational control | inflammation | RNA‐binding proteins | mRNA decay | Post-transcriptional regulation | Inflammation | RNA-binding proteins | MRNA decay | Translational control | MicroRNAs | Life Sciences & Biomedicine | Immunology | Science & Technology | Autoimmune Diseases - genetics | RNA Interference - immunology | Animals | Lymphocytes - immunology | Gene Expression Regulation - genetics | Gene Expression Regulation - immunology | Humans | RNA-Binding Proteins - immunology | Autoimmune Diseases - immunology | 3' Untranslated Regions - genetics | Genetic aspects | MicroRNA | Genetic transcription | Binding proteins | Genetic translation | Protein binding | Index Medicus | post-transcriptional regulation
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5. Full Text A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks
by Parnas, Oren and Jovanovic, Marko and Eisenhaure, Thomas M and Herbst, Rebecca H and Dixit, Atray and Ye, Chun Jimmie and Przybylski, Dariusz and Platt, Randall J and Tirosh, Itay and Sanjana, Neville E and Shalem, Ophir and Satija, Rahul and Raychowdhury, Raktima and Mertins, Philipp and Carr, Steven A and Zhang, Feng and Hacohen, Nir and Regev, Aviv
Cell (Cambridge), ISSN 0092-8674, 07/2015, Volume 162, Issue 3, pp. 675 - 686
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Cell Survival | Dendritic Cells - immunology | Mice, Transgenic | Hexosyltransferases - metabolism | Toll-Like Receptor 4 - immunology | Gene Knockout Techniques | Gene Regulatory Networks | Genetic Techniques | Immunity, Innate | Animals | Bone Marrow Cells - immunology | CRISPR-Cas Systems | Tumor Necrosis Factor-alpha - immunology | Cell Differentiation | Dendritic Cells - cytology | Membrane Proteins - metabolism | Mice | Dendritic cells | RNA | Genomics | Mitogens | Index Medicus
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