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Accounts of Chemical Research, ISSN 0001-4842, 10/2008, Volume 41, Issue 10, pp. 1319 - 1330
Journal Article
Journal of Chemical Theory and Computation, ISSN 1549-9618, 05/2010, Volume 6, Issue 5, pp. 1711 - 1725
Coarse-grain (CG) techniques allow considerable extension of the accessible size and time scales in simulations of biological systems. Although many CG... 
TRANSITION | BASE-PAIR | LANGEVIN | RNA HAIRPINS | SOLUTION CONFORMATION | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CHEMISTRY, PHYSICAL | FORCE-FIELD | B-DNA | MOLECULAR-DYNAMICS SIMULATIONS | NUCLEIC-ACIDS | DODECAMER
Journal Article
Physical Biology, ISSN 1478-3967, 06/2018, Volume 15, Issue 6, pp. 066001 - 066001
Although previously developed mesoscopic DNA models have successfully reproduced thermodynamic denaturation data, recent studies show that these overestimate... 
rate constants | modeling | biomolecular dynamics | PBD model | DNA | hairpins | CONFORMATIONAL FLUCTUATIONS | BIOCHEMISTRY & MOLECULAR BIOLOGY | HAIRPIN FORMATION | MODES | BIOPHYSICS | KINETICS | DIFFUSION | TRANSITIONS | Index Medicus
Journal Article
Science, ISSN 0036-8075, 11/2007, Volume 318, Issue 5853, pp. 1121 - 1125
Journal Article
Protein Science, ISSN 0961-8368, 11/2003, Volume 12, Issue 11, pp. 2443 - 2452
Cation–π interactions are common in proteins, but their contribution to the stability and specificity of protein structure has not been well established. In... 
diagonal interaction | β‐hairpin peptide | Cation–π | peptide secondary structure | stability | Peptide secondary structure | Diagonal interaction | Stability | Cation-π | β-hairpin peptide
Journal Article
European Journal of Medicinal Chemistry, ISSN 0223-5234, 06/2018, Volume 154, pp. 280 - 293
Aggregation of amyloid proteins is currently involved in more than 20 serious human diseases that are actually untreated, such as Alzheimer's disease (AD).... 
β-Hairpin | Amyloid | Oligomerization | Peptidomimetics | Alzheimer's disease | Fibrillization | CHEMISTRY, MEDICINAL | PROTEIN AGGREGATION | NMR CHEMICAL-SHIFTS | ALZHEIMERS-DISEASE | RANDOM COIL | TOXICITY | OLIGOMERS | C-13 | AMINO-ACIDS | SECONDARY STRUCTURE | INHIBITORS | beta-Hairpin | Index Medicus
Journal Article
Proteins: Structure, Function, and Bioinformatics, ISSN 0887-3585, 02/2006, Volume 62, Issue 3, pp. 672 - 685
Journal Article
ISSN 1744-683X, 12/2011, Volume 8, Issue 2, pp. 26 - 272
Injectable hydrogels are becoming increasingly important in the fields of tissue engineering and drug delivery due to their tunable properties, controllable... 
Journal Article
Biosensors and Bioelectronics, ISSN 0956-5663, 2011, Volume 26, Issue 11, pp. 4464 - 4470
We report a sensitive method for visual detection of mercury ions (II) (Hg ) in aqueous solution by using gold nanoparticles (Au-NPs) and thymine (T)-rich... 
Hairpin | Mercury | DNA | Visual detection | Gold nanoparticles
Journal Article
Chemistry of Materials, ISSN 0897-4756, 06/2016, Volume 28, Issue 12, pp. 4341 - 4348
Diphenylalanine is one of the most studied building blocks in organic supramolecular chemistry, forming ordered assemblies with unique mechanical, optical,... 
DIPEPTIDES | STRUCTURAL TRANSITION | HYDROGELS | DESIGN | PEPTIDE NANOTUBES | BUILDING-BLOCKS | MATERIALS SCIENCE, MULTIDISCIPLINARY | BETA-HAIRPINS | CHEMISTRY, PHYSICAL | AROMATIC INTERACTIONS | NANOSTRUCTURES | NANOTECHNOLOGICAL APPLICATIONS
Journal Article
Journal of Chemical Theory and Computation, ISSN 1549-9618, 12/2013, Volume 9, Issue 12, pp. 5430 - 5449
Presented is a polarizable force field based on a classical Drude oscillator framework, currently implemented in the programs CHARMM and NAMD, for modeling and... 
INITIO QUANTUM-CHEMISTRY | COLD-SHOCK PROTEIN | FLUCTUATING CHARGE | LIGAND-BINDING | N-15 NMR RELAXATION | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CHEMISTRY, PHYSICAL | REPLICA-EXCHANGE METHOD | POTENTIAL FUNCTIONS | PANCREATIC TRYPSIN-INHIBITOR | MOLECULAR-DYNAMICS SIMULATIONS | BETA-HAIRPIN FORMATION
Journal Article