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by Pereyra, Florencia and Jia, Xiaoming and McLaren, Paul J and Telenti, Amalio and de Bakker, Paul I. W and Walker, Bruce D and Ripke, Stephan and Brumme, Chanson J and Pulit, Sara L and Carrington, Mary and Kadie, Carl M and Carlson, Jonathan M and Heckerman, David and Graham, Robert R and Plenge, Robert M and Deeks, Steven G and Gianniny, Lauren and Crawford, Gabriel and Sullivan, Jordan and Gonzalez, Elena and Davies, Leela and Camargo, Amy and Moore, Jamie M and Beattie, Nicole and Gupta, Supriya and Crenshaw, Anew and Burtt, Noël P and Guiducci, Candace and Gupta, Namrata and Gao, Xiaojiang and Qi, Ying and Yuki, Yuko and Piechocka-Trocha, Alicja and Cutrell, Emily and Rosenberg, Rachel and Moss, Kristin L and Lemay, Paul and O'Leary, Jessica and Schaefer, Todd and Verma, Pranshu and Toth, Ildiko and Block, Brian and Baker, Brett and Rothchild, Alissa and Lian, Jeffrey and Proudfoot, Jacqueline and Alvino, Donna Marie L and Vine, Seanna and Addo, Marylyn M and Allen, Todd M and Altfeld, Marcus and Henn, Matthew R and Le Gall, Sylvie and Streeck, Henik and Haas, David W and Kuritzkes, Daniel R and Robbins, Gregory K and Shafer, Robert W and Gulick, Roy M and Shikuma, Cecilia M and Haubrich, Richard and Riddler, Sharon and Sax, Paul E and Daar, Eric S and Ribaudo, Heather J and Agan, Brian and Agarwal, Shanu and Ahern, Richard L and Allen, Brady L and Altidor, Sherly and Altschuler, Eric L and Ambardar, Sujata and Anastos, Kathryn and Anderson, Ben and Anderson, Val and Anady, Ushan and Antoniskis, Diana and Bangsberg, David and Barbaro, Daniel and Barrie, William and Bartczak, J and Barton, Simon and Basden, Patricia and Basgoz, Nesli and Bazner, Suzane and Bellos, Nicholaos C and Benson, Anne M and Berger, Judith and Bernard, Nicole F and Bernard, Annette M and Birch, Christopher and Bodner, Stanley J and Bolan, Robert K and Boueaux, Emilie T and Bradley, Meg and Braun, James F and Brndjar, Jon E and Brown, Stephen J and Brown, Katherine and Brown, Sheldon T and ... and Int HIV Controllers Study and International HIV Controllers Study and The International HIV Controllers Study
Science, ISSN 0036-8075, 12/2010, Volume 330, Issue 6010, pp. 1551 - 1557
Journal Article
Science, ISSN 0036-8075, 10/2011, Volume 334, Issue 6052, pp. 89 - 94
Whole genome comparisons identified introgression from archaic to modern humans. Our analysis of highly polymorphic human leukocyte antigen (HLA) class I,... 
HLA antigens | Haplotypes | Human populations | HLA A antigens | REPORTS | Alleles | HLA B antigens | Admixtures | Ligands | Genomes | HLA C antigens | MIGRATION | POPULATION | EVOLUTION | HAPLOTYPE MAP | MULTIDISCIPLINARY SCIENCES | HLA-B ALLELES | MHC | DIVERSITY | POLYMORPHISM | SELECTION | HISTORY | Humans | Asian Continental Ancestry Group - genetics | Adaptation, Biological | Molecular Sequence Data | Hominidae - genetics | HLA-A Antigens - metabolism | Genetic Variation | HLA-C Antigens - immunology | Hybridization, Genetic | Receptors, KIR - metabolism | Killer Cells, Natural - immunology | African Continental Ancestry Group - genetics | Oceanic Ancestry Group - genetics | HLA-B Antigens - genetics | European Continental Ancestry Group - genetics | HLA-B Antigens - immunology | Selection, Genetic | Continental Population Groups - genetics | Hominidae - immunology | Linkage Disequilibrium | HLA-B Antigens - metabolism | HLA-A Antigens - immunology | Animals | HLA-A Antigens - genetics | Genes, MHC Class I | HLA-C Antigens - genetics | Receptors, KIR - immunology | Evolution, Molecular | Histocompatibility antigens | Genomics | HLA histocompatibility antigens | Physiological aspects | Genetic aspects | Research | Immune system | Leucocytes | Antigens | Polymorphism | Index Medicus | Biological Sciences | Evolutionsbiologi | Naturvetenskap | Natural Sciences | Evolutionary Biology | Biologiska vetenskaper
Journal Article
Brain, ISSN 0006-8950, 2012, Volume 135, Issue 4, pp. 1042 - 1054
Peptides presented at the cell surface reflect the protein content of the cell; those on HLA class I molecules comprise the critical peptidome elements... 
peptidome | glioblastoma | tumour-infiltrating lymphocytes | tumour antigen | immunotherapy | AVIDITY | IDENTIFICATION | NEUROSCIENCES | CLINICAL NEUROLOGY | GLIOMA-CELL | GROWTH | CHONDROITIN SULFATE PROTEOGLYCAN | SELECTION | EXPRESSION | T-CELLS | PROGRESSION | TENASCIN-C | Oligonucleotide Array Sequence Analysis | Humans | Brain Neoplasms - pathology | Gene Expression Profiling | Glial Fibrillary Acidic Protein - metabolism | RNA, Messenger - metabolism | Antigens, Neoplasm - chemistry | HLA-A Antigens - analysis | Antigens, CD - metabolism | Sequence Analysis, Protein | Brain Neoplasms - immunology | Flow Cytometry | Antigens, Neoplasm - therapeutic use | Platelet Endothelial Cell Adhesion Molecule-1 - metabolism | Mass Spectrometry | Chromatography, Liquid | Cytokines - metabolism | Antigens, Neoplasm - immunology | Peptides - immunology | Glioblastoma - therapy | HLA-A Antigens - immunology | Glioblastoma - immunology | Glioblastoma - pathology | Brain Neoplasms - therapy | HLA-A Antigens - chemistry | CD8-Positive T-Lymphocytes - immunology | Antigen Presentation - physiology | Peptides - analysis | Receptor-Like Protein Tyrosine Phosphatases, Class 5 - metabolism | Index Medicus | Abridged Index Medicus | Immunogenicity | CD8 antigen | Immunotherapy | Glioblastoma | Data processing | Histocompatibility antigen HLA | Lymphocytes T | Vaccines | Cell surface | Immunological tolerance
Journal Article
Journal of Immunology, ISSN 0022-1767, 05/2010, Volume 184, Issue 9, pp. 4936 - 4946
Journal Article
Book
Journal Article
Journal of Immunology, ISSN 0022-1767, 03/2014, Volume 192, Issue 6, pp. 2602 - 2610
The interaction between clonally distributed inhibitory receptors and their activating counterparts on NK cells and HLA class I molecules defines NK cell... 
RESPONSES | TAP DEFICIENCY SYNDROME | BARE LYMPHOCYTE SYNDROME | RECOGNITION | KIR | TOLERANCE | SURFACE EXPRESSION | SELF | IMMUNOLOGY | TAP1-DEFICIENT PATIENT | CD8-ALPHA-ALPHA | Humans | Middle Aged | Male | Interferon-gamma - metabolism | HLA-A Antigens - metabolism | Histocompatibility Antigens Class I - metabolism | ATP-Binding Cassette Transporters - deficiency | Cell Differentiation - genetics | NK Cell Lectin-Like Receptor Subfamily C - immunology | Flow Cytometry | ATP-Binding Cassette Transporters - genetics | HLA-C Antigens - immunology | Receptors, KIR - metabolism | Lysosomal-Associated Membrane Protein 1 - immunology | Killer Cells, Natural - immunology | Adult | Female | CD56 Antigen - immunology | HLA-B Antigens - genetics | CD57 Antigens - metabolism | HLA-C Antigens - metabolism | CD56 Antigen - metabolism | NK Cell Lectin-Like Receptor Subfamily C - metabolism | CD57 Antigens - immunology | Receptors, KIR - genetics | HLA-B Antigens - immunology | Histocompatibility Antigens Class I - immunology | Genotype | Histocompatibility Antigens Class I - genetics | CD8 Antigens - immunology | HLA-B Antigens - metabolism | Cell Differentiation - immunology | CD8 Antigens - metabolism | HLA-A Antigens - immunology | Interferon-gamma - immunology | HLA-A Antigens - genetics | Lysosomal-Associated Membrane Protein 1 - metabolism | HLA-C Antigens - genetics | Killer Cells, Natural - metabolism | Mutation | ATP-Binding Cassette Sub-Family B Member 2 | ATP-Binding Cassette Transporters - immunology | Receptors, KIR - immunology | Index Medicus | Abridged Index Medicus
Journal Article
Journal Article
Nature Genetics, ISSN 1061-4036, 05/2017, Volume 49, Issue 5, pp. 659 - 665
An individual's T cell repertoire dynamically encodes their pathogen exposure history. To determine whether pathogen exposure signatures can be identified by... 
RESPONSES | IN-VITRO RESTIMULATION | RECEPTOR DIVERSITY | VIRUS | RECOGNITION | GENETICS & HEREDITY | POPULATIONS | SELECTION | VIRAL-INFECTION | CLONES | LYMPHOCYTES | Cytomegalovirus - genetics | Reproducibility of Results | Humans | HLA-B Antigens - immunology | HLA Antigens - immunology | Epitopes, T-Lymphocyte - genetics | HLA Antigens - genetics | T-Lymphocytes - virology | Host-Pathogen Interactions - immunology | Cytomegalovirus - immunology | HLA-A Antigens - immunology | Models, Immunological | Algorithms | T-Lymphocytes - metabolism | HLA-A Antigens - genetics | Receptors, Antigen, T-Cell - immunology | T-Lymphocytes - immunology | Receptors, Antigen, T-Cell - genetics | Epitopes, T-Lymphocyte - immunology | High-Throughput Nucleotide Sequencing - methods | Cytomegalovirus - physiology | HLA-B Antigens - genetics | Cohort Studies | Histocompatibility Testing - methods | Immunogenetics | Histocompatibility antigens | Cytomegaloviruses | HLA histocompatibility antigens | Genetic aspects | Properties | T cells | Health aspects | Antigens | Cytomegalovirus | Medical research | Pathogens | Cytotoxicity | Infections | T cell receptors | Exposure | Lymphocytes T | T-cell receptor | Receptors | Immunology | Lymphocytes | Coding | Diagnostic systems | Signatures | In vitro methods and tests | Viral infections | Index Medicus
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 8/2012, Volume 109, Issue 33, pp. 13353 - 13358
Human leukocyte antigen HLA-B alleles have better protective activity against HIV-1 than HLA-A alleles, possibly due to differences in HLA-restricted... 
T lymphocytes | Molecules | HLA A antigens | Cell lines | Alleles | HLA B antigens | Viruses | Down regulation | HLA C antigens | HIV 1 | HEAVY-CHAINS | PROTEIN | MULTIDISCIPLINARY SCIENCES | COMPLEX CLASS-I | CELL-SURFACE EXPRESSION | IMMUNODEFICIENCY VIRUS | MHC-I | INFECTION | DIVERSITY | POLYMORPHISM | CYTOTOXIC T-LYMPHOCYTES | HIV Infections - prevention & control | Humans | Molecular Sequence Data | HLA-C Antigens - chemistry | Epitopes - immunology | HIV Infections - immunology | HLA-B7 Antigen - immunology | HLA-C Antigens - immunology | HLA-B Antigens - genetics | HLA-B Antigens - chemistry | Protein Structure, Tertiary | T-Lymphocytes, Cytotoxic - immunology | Amino Acid Sequence | Cell Line | T-Lymphocytes, Cytotoxic - virology | HIV Infections - virology | HLA-B Antigens - immunology | Polymorphism, Genetic | HIV-1 - immunology | HLA-A Antigens - immunology | Sequence Alignment | Cytoplasm - immunology | Recombinant Proteins - immunology | Down-Regulation - immunology | nef Gene Products, Human Immunodeficiency Virus - immunology | HLA-A Antigens - genetics | HLA-A Antigens - chemistry | gag Gene Products, Human Immunodeficiency Virus - immunology | Prevention | Histocompatibility antigens | HLA histocompatibility antigens | Physiological aspects | T cells | HIV (Viruses) | Health aspects | Antigens | Leucocytes | Gene expression | Lymphocytes | Human immunodeficiency virus--HIV | Cells | Index Medicus | Biological Sciences
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 6/2014, Volume 111, Issue 24, pp. 8867 - 8872
The HAL protein, HLA-B*51, encoded by HLA-B in MHC, is the strongest known genetic risk factor for Behçet disease (BD). Associations between BD and other... 
HLA antigens | Haplotypes | Molecules | HLA A antigens | Receptors | SEE COMMENTARY | Alleles | Predisposing factors | HLA B antigens | Amino acids | Familial Mediterranean fever | Killer immunoglobulin-like receptors | Antigen presentation | Hla imputation | Natural killer cells | Autoinflammation | antigen presentation | RECOGNITION | MULTIDISCIPLINARY SCIENCES | autoinflammation | SEQUENCE-DERIVED PEPTIDES | HLA-B | SUSCEPTIBILITY LOCI | MAJOR HISTOCOMPATIBILITY COMPLEX | HLA-B-ASTERISK-5101 | IMMUNOGLOBULIN-LIKE RECEPTOR | REGION | killer immunoglobulin-like receptors | natural killer cells | GENE | HLA imputation | GENOME-WIDE ASSOCIATION | Multivariate Analysis | Genetic Predisposition to Disease | Immunoglobulins - immunology | Humans | Risk Factors | HLA-B51 Antigen - genetics | Genotype | Logistic Models | Histocompatibility Antigens Class I - chemistry | Protein Sorting Signals | Linkage Disequilibrium | Genes, MHC Class I | Polymorphism, Single Nucleotide | Behcet Syndrome - genetics | Odds Ratio | Behcet Syndrome - immunology | Care and treatment | Histocompatibility antigens | HLA histocompatibility antigens | Behcet's disease | Genetic aspects | Research | Single nucleotide polymorphisms | Diagnosis | Proteins | Antigens | Pathology | Genetic disorders | Genomics | Cytotoxicity | Binding sites | Index Medicus | Biological Sciences
Journal Article