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Bioinformatics, ISSN 1367-4803, 09/2016, Volume 32, Issue 17, pp. 2650 - 2658
Motivation: Calculating multiple protein structure alignments (MSAs) is important for understanding functional and evolutionary relationships between protein... 
HOMSTRAD | MOTIFS | SIMILARITIES | DATABASE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE ALIGNMENT | SERVER | ALGORITHM | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | HOMOLOGOUS PROTEINS | TOOL | Proteins | Sequence Alignment | Software | Algorithms | Models, Statistical | Normal Distribution | Bioinformatics | Computer Science
Journal Article
Letters in Drug Design and Discovery, ISSN 1570-1808, 01/2015, Volume 12, Issue 8, pp. 661 - 672
34 novel ATR inhibitors were used to build an optimal 3D-QSAR model. Homology modeling and molecular docking were used to study the interaction of ATR kinase... 
3D-QSAR | ATR inhibitor | Molecular docking | Homology modeling | CoMFA | CoMSIA | CANCER-CELLS | CHEMISTRY, MEDICINAL | DOCKING | COMBINED 3D-QSAR | FIELD ANALYSIS | CHEMOTHERAPY | HOMSTRAD | POTENT | DYNAMICS | DNA-REPAIR | DERIVATIVES
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 05/2010, Volume 11, Issue 1, pp. 235 - 235
Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we... 
MATRIX | SEARCH | BIOCHEMICAL RESEARCH METHODS | MULTIPLE | ACCURACY | CONSISTENCY | HOMSTRAD | DATABASE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | CLUSTAL-W | MATHEMATICAL & COMPUTATIONAL BIOLOGY | PROTEINS | TOOL | Sequence Alignment - methods | Software | Algorithms | Base Sequence | Usage | Amino acid sequence | Biochemical genetics | Research | Methods | Computational biology
Journal Article
In Silico Biology, ISSN 1386-6338, 2006, Volume 6, Issue 4, pp. 321 - 339
The most popular way of comparing the performance of multiple sequence alignment programs is to use empirical testing on sets of test sequences. Several such... 
HOMSTRAD | PREFAB | Over-training | OxBench | SABmark | Multiple sequence alignment | Over-alignment | Benchmark | BAliBASE | IRMbase | RMSD | Structural superposition | Databases, Genetic | Sequence Alignment - standards | Software | Sequence Alignment - statistics & numerical data | Cluster Analysis
Journal Article
Proteins: Structure, Function, and Bioinformatics, ISSN 0887-3585, 01/2004, Volume 54, Issue 1, pp. 71 - 87
Journal Article
Trends in Genetics, ISSN 0168-9525, 2001, Volume 17, Issue 9, pp. 495 - 495
Journal Article
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