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1. Full Text A novel mechanism of generating extracellular vesicles during apoptosis via a beads-on-a-string membrane structure
by Atkin-Smith, Georgia K and Tixeira, Rochelle and Paone, Stephanie and Mathivanan, Suresh and Collins, Christine and Liem, Michael and Goodall, Katharine J and Ravichandran, Kodi S and Hulett, Mark D and Poon, Ivan K.H
Nature Communications, ISSN 2041-1723, 06/2015, Volume 6, Issue 1, pp. 7439 - 7439
Disassembly of apoptotic cells into smaller fragments (a form of extracellular vesicle called apoptotic bodies) can facilitate removal of apoptotic debris and... 
CELLS | TRANSFERRIN RECEPTOR | PHOSPHORYLATION | AUTOANTIGENS | MULTIDISCIPLINARY SCIENCES | ROCK-I | EXOSOMES | CASPASE-MEDIATED ACTIVATION | BODIES | RETICULOCYTES | INHIBITORS | Cell Line | Epithelial Cells - metabolism | Extracellular Vesicles - ultrastructure | Cell Survival | Jurkat Cells | Humans | Epithelial Cells - ultrastructure | Monocytes - metabolism | Cell Membrane - ultrastructure | Microscopy, Interference | Actomyosin - metabolism | Time-Lapse Imaging | Extracellular Vesicles - metabolism | Neurons - ultrastructure | Cell Membrane - metabolism | Neurons - metabolism | HeLa Cells | Apoptosis | Monocytes - ultrastructure | Index Medicus
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2. Full Text Reorganization of the Endosomal System in Salmonella-Infected Cells: The Ultrastructure of Salmonella-Induced Tubular Compartments
by Krieger, Viktoria and Liebl, David and Zhang, Yuying and Rajashekar, Roopa and Chlanda, Petr and Giesker, Katrin and Chikkaballi, Deepak and Hensel, Michael
PLoS Pathogens, ISSN 1553-7366, 09/2014, Volume 10, Issue 9, pp. e1004374 - e1004374
During the intracellular life of Salmonella enterica, a unique membrane-bound compartment termed Salmonella-containing vacuole, or SCV, is formed. By means of... 
EFFECTOR PROTEINS | TYPHIMURIUM | MICROBIOLOGY | AUTOPHAGY | VIRULENCE | LYSOSOMAL MEMBRANE-GLYCOPROTEINS | ENTERICA | PATHOGENICITY ISLAND 2 | CONTAINING VACUOLE | VIROLOGY | EPITHELIAL-CELLS | PARASITOLOGY | III SECRETION SYSTEM | Microscopy, Electron, Transmission | Salmonella Infections - pathology | Vacuoles - ultrastructure | Macrophages - pathology | Humans | Phagocytosis - physiology | Salmonella - physiology | Salmonella Infections - metabolism | Autophagy | Endosomes - metabolism | Intracellular Membranes - ultrastructure | Protein Transport | Animals | Endosomes - ultrastructure | Vacuoles - metabolism | Bacterial Proteins - metabolism | Salmonella Infections - microbiology | Mice | HeLa Cells | Intracellular Membranes - metabolism | Macrophages - microbiology | Salmonella | Protein research | Immune response | Physiological aspects | Genetic aspects | Research | Health aspects | Index Medicus | Proteins | Biosynthesis | Microscopy | Bacteriology
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3. Full Text Repair of Injured Plasma Membrane by Rapid ca²⁺-Dependent Endocytosis
by Vincent Idone and Christina Tam and John W. Goss and Derek Toomre and Marc Pypaert and Norma W. Andrews
The Journal of Cell Biology, ISSN 0021-9525, 3/2008, Volume 180, Issue 5, pp. 905 - 914
Ca²⁺ influx through plasma membrane lesions triggers a rapid repair process that was previously shown to require the exocytosis of lysosomal organelles (Reddy,... 
T lymphocytes | Endocytosis | Dextrans | Neurons | Report | HeLa cells | Neurosecretory cells | Cell membranes | Exocytosis | Cells | Endosomes | NUCLEATED CELLS | RECOVERY | RESISTANT | LYSOSOMES | POLYMORPHONUCLEAR LEUKOCYTES | EXOCYTOSIS | ENLARGEOSOME | COMPLEMENT ATTACK | PROTEINS | FIBROBLASTS | CELL BIOLOGY | Sterols - metabolism | Epithelial Cells - metabolism | Calcium - metabolism | Calcium Signaling - physiology | Epithelial Cells - drug effects | Humans | Bacterial Toxins - toxicity | Streptolysins - toxicity | Cell Membrane Structures - metabolism | Time Factors | Immunity, Innate - physiology | Cell Membrane - metabolism | Membrane Proteins - metabolism | Cell Membrane - drug effects | Cell Line | Cell Membrane Structures - drug effects | Epithelial Cells - ultrastructure | Rats | Cell Membrane - ultrastructure | Reaction Time - physiology | Endocytosis - physiology | Cell Membrane Structures - ultrastructure | Animals | Wound Healing - physiology | HeLa Cells | Index Medicus
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4. Full Text Luminescent proteins for high-speed single-cell and whole-body imaging
by Saito, Kenta and Chang, Y.-F and Horikawa, Kazuki and Hatsugai, Noriyuki and Higuchi, Yuriko and Hashida, Mitsuru and Yoshida, Yu and Matsuda, Tomoki and Arai, Yoshiyuki and Nagai, Takeharu
Nature Communications, ISSN 2041-1723, 2012, Volume 3, Issue 1, pp. 1262 - 1262
The use of fluorescent proteins has revolutionized our understanding of biological processes. However, the requirement for external illumination precludes... 
MUTAGENESIS | ACTIVATION | MULTIDISCIPLINARY SCIENCES | FLUORESCENT INDICATORS | ENERGY-TRANSFER | LEVEL | EMISSION | BIOLUMINESCENCE | CA2+ INDICATORS | LUCIFERASE | LIVING CELLS | Chloroplasts - ultrastructure | Luciferases, Renilla | Arabidopsis | Humans | Luminescence | Cells - ultrastructure | Molecular Sequence Data | Rats | Male | Nanostructures | Luminescent Measurements - methods | Chloroplasts - metabolism | Recombinant Fusion Proteins | Bacterial Proteins | Animals | Luciferases | Mice, Nude | Adenosine Triphosphate - metabolism | HeLa Cells - ultrastructure | Mice | Mice, Inbred BALB C | Whole Body Imaging - methods | Cyclic AMP - metabolism | Luminescent Proteins | Index Medicus
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5. Full Text Helium Ion Microscopy (HIM) for the imaging of biological samples at sub-nanometer resolution
by Joens, Matthew S and Huynh, Chuong and Kasuboski, James M and Ferranti, David and Sigal, Yury J and Zeitvogel, Fabian and Obst, Martin and Burkhardt, Claus J and Curran, Kevin P and Chalasani, Sreekanth H and Stern, Lewis A and Goetze, Bernhard and Fitzpatrick, James A. J
Scientific Reports, ISSN 2045-2322, 12/2013, Volume 3, Issue 1, pp. 3514 - 3514
Scanning Electron Microscopy (SEM) has long been the standard in imaging the sub-micrometer surface ultrastructure of both hard and soft materials. In the case... 
MECHANISMS | MULTIDISCIPLINARY SCIENCES | SCANNING-ELECTRON-MICROSCOPY | LOW-VOLTAGE | Microscopy - methods | Nematoda - ultrastructure | Animals | Microscopy, Electron, Scanning - methods | Humans | Arabidopsis - ultrastructure | Bacteria - ultrastructure | Ions | HeLa Cells - ultrastructure | Helium | Scanning electron microscopy | Electron microscopy | Ultrastructure | Heavy metals | Index Medicus
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6. Full Text The conversion of centrioles to centrosomes: Essential coupling of duplication with segregation
by Wang, Won-Jing and Soni, Rajesh Kumar and Uryu, Kunihiro and Tsou, Meng-Fu Bryan
Journal of Cell Biology, ISSN 0021-9525, 05/2011, Volume 193, Issue 4, pp. 727 - 739
Centrioles are self-reproducing organelles that form the core structure of centrosomes or microtubule-organizing centers (MTOCs). However, whether duplication... 
DE-NOVO FORMATION | HELA-CELLS | HAMSTER OVARY CELLS | PERICENTRIOLAR MATERIAL | VERTEBRATE CELLS | ELECTRON-MICROSCOPY | S-PHASE | POLO KINASE | GAMMA-TUBULIN | CYCLE | CELL BIOLOGY | Mitosis | Humans | Homeostasis | Microscopy, Video | Centrioles - physiology | Centrosome - ultrastructure | Epithelial Cells - physiology | Transfection | RNA Interference | Retinal Pigment Epithelium - ultrastructure | Time Factors | Retinal Pigment Epithelium - physiology | Cell Cycle Proteins - genetics | Centrosome - physiology | Centrioles - ultrastructure | Protein-Serine-Threonine Kinases - metabolism | Proto-Oncogene Proteins - metabolism | Microscopy, Electron, Transmission | Cell Cycle Proteins - metabolism | Cells, Cultured | Protein-Serine-Threonine Kinases - genetics | Epithelial Cells - ultrastructure | Proto-Oncogene Proteins - genetics | Proteins - metabolism | Fluorescent Antibody Technique | HeLa Cells | Microscopy, Fluorescence | Retinal Pigment Epithelium - cytology | Physiological aspects | Centrioles | Research | Cell development (Biology) | Centrosomes | Cell division | Molecular structure | Cells | Cell cycle | Index Medicus
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7. Full Text Molecular engineering of a TBET-based two-photon fluorescent probe for ratiometric imaging of living cells and tissues
by Zhou, Liyi and Zhang, Xiaobing and Wang, Qianqian and Lv, Yifan and Mao, Guojiang and Luo, Aili and Wu, Yongxiang and Wu, Yuan and Zhang, Jing and Tan, Weihong
Journal of the American Chemical Society, ISSN 0002-7863, 07/2014, Volume 136, Issue 28, pp. 9838 - 9841
In contrast to one-photon microscopy, two-photon probe-based fluorescent imaging can provide improved three-dimensional spatial localization and increased... 
THIOLS | CU2 | CASSETTES | LIPID RAFTS | H2S | EXCITATION CROSS-SECTIONS | IONS | TALK | LIVE CELLS | CHEMISTRY, MULTIDISCIPLINARY | CHEMODOSIMETER | Fluorescent Dyes - chemistry | Copper - chemistry | Protein Engineering - methods | Humans | Rhodamines | Cells - ultrastructure | Energy Transfer | HeLa Cells | Imaging, Three-Dimensional | Energy transformation | Usage | Diagnostic imaging | Research | Fluorescent proteins | Analysis | Index Medicus
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8. Full Text Autocrine BDNF-TrkB signalling within a single dendritic spine
by Harward, Stephen C and Hedrick, Nathan G and Hall, Charles E and Parra-Bueno, Paula and Milner, Teresa A and Pan, Enhui and Laviv, Tal and Hempstead, Barbara L and Yasuda, Ryohei and McNamara, James O
Nature, ISSN 0028-0836, 09/2016, Volume 538, Issue 7623, pp. 99 - 103
Brain-derived neurotrophic factor (BDNF) and its receptor TrkB are crucial for many forms of neuronal plasticity, including structural long-term potentiation... 
Brain-Derived Neurotrophic Factor - secretion | Green Fluorescent Proteins | Pyramidal Cells - metabolism | Membrane Glycoproteins - metabolism | Protein-Tyrosine Kinases - metabolism | Humans | Receptors, N-Methyl-D-Aspartate - metabolism | Male | Dendritic Spines - metabolism | Fluorescence Resonance Energy Transfer | Female | Hippocampus - ultrastructure | Brain-Derived Neurotrophic Factor - metabolism | Post-Synaptic Density - metabolism | Microscopy, Fluorescence, Multiphoton | Pyramidal Cells - ultrastructure | Calcium-Calmodulin-Dependent Protein Kinase Type 2 - metabolism | Autocrine Communication | Signal Transduction | Tissue Culture Techniques | Mice, Inbred C57BL | Rats | Post-Synaptic Density - secretion | Dendritic Spines - secretion | Hippocampus - cytology | Microscopy, Electron | Hippocampus - metabolism | Animals | Long-Term Potentiation | Glutamic Acid - metabolism | Mice | Enzyme Activation | HeLa Cells | Dendritic Spines - ultrastructure | Proteins | Signal transduction | Phosphorylation | Dendritic cells | Kinases | Index Medicus
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9. Full Text Graphene-enabled electron microscopy and correlated super-resolution microscopy of wet cells
by Wojcik, Michal and Hauser, Margaret and Li, Wan and Moon, Seonah and Xu, Ke
Nature Communications, ISSN 2041-1723, 06/2015, Volume 6, Issue 1, pp. 7384 - 7384
The application of electron microscopy to hydrated biological samples has been limited by high-vacuum operating conditions. Traditional methods utilize harsh... 
STORM | FILMS | FLUORESCENCE | MULTIDISCIPLINARY SCIENCES | MEMBRANES | ACTIN CYTOSKELETON | TISSUES | OPTICAL RECONSTRUCTION MICROSCOPY | EDGE | LIQUID CELLS | Optical Imaging | Animals | Microscopy, Electron, Scanning - methods | Microscopy, Electron - methods | Humans | Graphite | Cells - ultrastructure | Cercopithecus aethiops | Spectrum Analysis, Raman | HeLa Cells | Actin Cytoskeleton - ultrastructure | COS Cells | Index Medicus
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10. Use of quantum dots for live cell imaging
by Jaiswal, Jyoti K and Jaiswal, Jyoti K and Goldman, Ellen R and Goldman, Ellen R and Mattoussi, Hedi and Mattoussi, Hedi and Simon, Sanford M and Simon, Sanford M
Nat Methods, ISSN 1548-7091, 10/2004, Volume 1, Issue 1, pp. 73 - 78
Monitoring interactions within and among cells as they grow and differentiate is a key to understanding organismal development. Fluorescence microscopy is... 
MICROSCOPY | RECOMBINANT PROTEIN | MAMMALIAN-CELLS | IN-VIVO | BIOCHEMICAL RESEARCH METHODS | Quantum Dots | Cells, Cultured - ultrastructure | Humans | Cells - ultrastructure | HeLa Cells - ultrastructure | Avidin | Microscopy, Fluorescence
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11. Full Text Luminal Particles within Cellular Microtubules
by Boyan K. Garvalov and Benoît Zuber and Cédric Bouchet-Marquis and Mikhail Kudryashev and Manuela Gruska and Martin Beck and Andrew Leis and Friedrich Frischknecht and Frank Bradke and Wolfgang Baumeister and Jacques Dubochet and Marek Cyrklaff
The Journal of Cell Biology, ISSN 0021-9525, 9/2006, Volume 174, Issue 6, pp. 759 - 765
The regulation of microtubule dynamics is attributed to microtubule-associated proteins that bind to the microtubule outer surface, but little is known about... 
Neurons | Epithelial cells | Microtubules | Cell lines | Stem cells | HeLa cells | Tomography | Cultured cells | Reports | Pluripotent stem cells | Cells | CELLS | BLOOD PLATELETS | ARCHITECTURE | SECTIONS | NEURONS | CRYOELECTRON TOMOGRAPHY | MICROSCOPY | COMPLEX STRUCTURE | ELECTRON TOMOGRAPHY | CELL BIOLOGY | Microtubule-Associated Proteins - metabolism | Humans | Microtubule-Associated Proteins - ultrastructure | Microtubules - metabolism | Neurons - ultrastructure | Neurites - ultrastructure | Cytoplasmic Granules - metabolism | Axons - ultrastructure | Microtubules - ultrastructure | Hippocampus - ultrastructure | Neurons - metabolism | Organ Culture Techniques | Animals, Newborn | Pluripotent Stem Cells - ultrastructure | Cells, Cultured | Axons - metabolism | Rats | Neurites - metabolism | Astrocytes - ultrastructure | Pluripotent Stem Cells - metabolism | Hippocampus - metabolism | Animals | Cytoplasmic Granules - ultrastructure | Mice | HeLa Cells | Cryoelectron Microscopy - methods | Astrocytes - metabolism | Research | Protein binding | Proteins | Cellular biology | Mammals | Index Medicus
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12. Full Text Genetically encoded fluorescent indicator for intracellular hydrogen peroxide
by Belousov, Vsevolod V and Fradkov, Arkady F and Lukyanov, Konstantin A and Staroverov, Dmitry B and Shakhbazov, Konstantin S and Terskikh, Alexey V and Lukyanov, Sergey
Nature Methods, ISSN 1548-7091, 04/2006, Volume 3, Issue 4, pp. 281 - 286
We developed a genetically encoded, highly specific fluorescent probe for detecting hydrogen peroxide (H2O2) inside living cells. This probe, named HyPer,... 
REACTIVE NITROGEN | BCL-2 | CELLS | ACTIVATION | OXIDATIVE STRESS MEASUREMENTS | ROS | BIOCHEMICAL RESEARCH METHODS | TRAIL-INDUCED APOPTOSIS | OXYR TRANSCRIPTION FACTOR | PROTEIN INDICATORS | PC12 Cells - ultrastructure | Genetic Code | Apoptosis Regulatory Proteins - pharmacology | Humans | Bacterial Proteins - chemistry | Cytoplasm - metabolism | HeLa Cells - metabolism | DNA-Binding Proteins - metabolism | Nerve Growth Factors - pharmacology | Time Factors | Sensitivity and Specificity | Luminescent Proteins - chemistry | Repressor Proteins - metabolism | Bacterial Proteins - genetics | Rats | Escherichia coli Proteins - metabolism | Mitochondria - metabolism | Hydrogen Peroxide - metabolism | Transcription Factors - metabolism | Animals | Prokaryotic Cells - metabolism | Hydrogen Peroxide - analysis | PC12 Cells - metabolism | Biosensing Techniques - methods | Luminescent Proteins - genetics | HeLa Cells - ultrastructure | Intracellular Membranes - metabolism | Proteins | Fluorescence | Membranes | Chemical compounds | Cells
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13. Full Text PtdIns3P controls mTORC1 signaling through lysosomal positioning
by Hong, Zhi and Pedersen, Nina Marie and Wang, Ling and Torgersen, Maria Lyngaas and Stenmark, Harald and Raiborg, Camilla
Journal of Cell Biology, ISSN 0021-9525, 2017, Volume 216, Issue 12, pp. 4217 - 4233
The mechanistic target of rapamycin complex 1 (mTORC1) is a protein kinase complex that localizes to lysosomes to up-regulate anabolic processes and... 
ACTIVATION | BINDS | BECLIN 1 | AMINO-ACIDS | PHOSPHATIDYLINOSITOL 3-KINASE COMPLEXES | GROWTH | KINASE | AUTOPHAGY | VPS34 | STRESS | CELL BIOLOGY | Retinal Pigment Epithelium - metabolism | Epithelial Cells - metabolism | Phosphatidylinositol Phosphates - metabolism | Vesicular Transport Proteins - metabolism | Humans | Endoplasmic Reticulum - metabolism | Endoplasmic Reticulum - ultrastructure | DNA-Binding Proteins - metabolism | Mechanistic Target of Rapamycin Complex 1 - genetics | Cell Nucleus - metabolism | Lysosomes - metabolism | Biological Transport | HEK293 Cells | Autophagy - genetics | Signal Transduction | Vesicular Transport Proteins - genetics | Gene Expression Regulation | Class III Phosphatidylinositol 3-Kinases - metabolism | Epithelial Cells - ultrastructure | Transcription Factors - genetics | Cell Nucleus - ultrastructure | DNA-Binding Proteins - genetics | Mechanistic Target of Rapamycin Complex 1 - metabolism | Lysosomes - ultrastructure | Transcription Factors - metabolism | Class III Phosphatidylinositol 3-Kinases - genetics | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics | Cell Line, Tumor | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - metabolism | HeLa Cells | Retinal Pigment Epithelium - cytology | TOR protein | Phosphates | Translocation | Protein kinase C | Lysosomes | Amino acids | Activation | Rapamycin | Phosphatidylinositol 3-phosphate | Autophagy | Cells | Recruitment | Proteins | Positioning devices (machinery) | Signaling | Cell activation | Protein kinase | Lipid kinase | Endoplasmic reticulum | Phagocytosis | Index Medicus | 19 | s | 29
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14. Full Text Mitotic cells contract actomyosin cortex and generate pressure to round against or escape epithelial confinement
by Sorce, Barbara and Escobedo, Carlos and Toyoda, Yusuke and Stewart, Martin P and Cattin, Cedric J and Newton, Richard and Banerjee, Indranil and Stettler, Alexander and Roska, Botond and Eaton, Suzanne and Hyman, Anthony A and Hierlemann, Andreas and Müller, Daniel J
Nature Communications, ISSN 2041-1723, 11/2015, Volume 6, Issue 1, pp. 8872 - 8872
Little is known about how mitotic cells round against epithelial confinement. Here, we engineer micropillar arrays that subject cells to lateral mechanical... 
MITOSIS | MORPHOGENESIS | HOMEOSTASIS | FORCE | MULTIDISCIPLINARY SCIENCES | MECHANICAL CONTROL | JUNCTIONS | SPINDLE ORIENTATION | INTERKINETIC NUCLEAR MIGRATION | DIVISION | PROGRESSION | Microscopy, Electron, Scanning | Cell Proliferation | Actomyosin | Cell Survival | Mitosis | Humans | Epithelial Cells - ultrastructure | Stress, Mechanical | Cell Size | Epithelium - ultrastructure | Hydrostatic Pressure | Pressure | Time-Lapse Imaging | Microscopy, Confocal | Animals | Cell Shape | Metaphase | Dogs | Madin Darby Canine Kidney Cells | HeLa Cells | Spindle Apparatus - ultrastructure | Confinement | Deformation | Yeast | Epithelial cells | Hydrostatic pressure | Rounding | Spindles | Contraction | Apoptosis | Index Medicus
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