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1. Full Text KSHV PAN RNA associates with demethylases UTX and JMJD3 to activate lytic replication through a physical interaction with the virus genome
by Rossetto, Cyprian C and Pari, Gregory
PLoS Pathogens, ISSN 1553-7366, 05/2012, Volume 8, Issue 5, p. e1002680
Kaposi's sarcoma-associated herpesvirus (KSHV) is the cause of Kaposi's sarcoma and body cavity lymphomas. KSHV lytic infection produces PAN RNA, a highly... 
CHROMATIN | SARCOMA-ASSOCIATED HERPESVIRUS | VIRAL GENOME | MICROBIOLOGY | VIROLOGY | LONG NONCODING RNA | SWITCH PROTEIN | GROWTH | GENE-EXPRESSION | POLYADENYLATED NUCLEAR-RNA | BINDING | RTA | PARASITOLOGY | Chromatin - metabolism | Sequence Deletion | Virus Activation - physiology | Humans | Transcriptional Activation | Histones - biosynthesis | Neoplasm Proteins - metabolism | Histone Demethylases - genetics | Viral Proteins - metabolism | DNA-Binding Proteins - metabolism | Immediate-Early Proteins - metabolism | RNA, Messenger - biosynthesis | RNA, Viral - genetics | Chromatin Immunoprecipitation | Herpesvirus 8, Human - metabolism | HEK293 Cells | Trans-Activators - genetics | Trans-Activators - biosynthesis | Neoplasm Proteins - genetics | Nuclear Proteins - genetics | Herpesvirus 8, Human - physiology | Cell Line | Promoter Regions, Genetic | Immediate-Early Proteins - biosynthesis | RNA, Messenger - genetics | Viral Proteins - genetics | Herpesvirus 8, Human - genetics | Nuclear Proteins - metabolism | DNA-Binding Proteins - genetics | Jumonji Domain-Containing Histone Demethylases - genetics | Histone Demethylases - metabolism | Immediate-Early Proteins - genetics | Virus Replication | Gene Expression Regulation, Viral | Trans-Activators - metabolism | Jumonji Domain-Containing Histone Demethylases - metabolism | Human herpesvirus 8 | Viral genetics | Physiological aspects | Genetic aspects | Research | Virulence (Microbiology) | Health aspects | Proteins | Cell culture | Cloning | Genetic engineering | Genomes | Lymphomas | Gene expression | Kaposis sarcoma
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2. Full Text Construction and Manipulation of a New Kaposi's Sarcoma-Associated Herpesvirus Bacterial Artificial Chromosome Clone
by Kevin F. Brulois and Heesoon Chang and Amy Si-Ying Lee and Armin Ensser and Lai-Yee Wong and Zsolt Toth and Sun Hwa Lee and Hye-Ra Lee and Jinjong Myoung and Don Ganem and Tae-Kwang Oh and Jihyun F. Kim and Shou-Jiang Gao and Jae U. Jung
Journal of Virology, ISSN 0022-538X, 09/2012, Volume 86, Issue 18, pp. 9708 - 9720
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
VIROLOGY | LYTIC GENE-EXPRESSION | COMPLEX CLASS-I | ENDOTHELIAL-CELLS | ESCHERICHIA-COLI | DOWN-REGULATION | K5 PROTEINS | CLASS-I MOLECULES | T-CELLS | E3 UBIQUITIN LIGASE | IMMUNE EVASION | Humans | Cercopithecus aethiops | Molecular Sequence Data | Lymphoma, Primary Effusion - virology | Chromosomes, Artificial, Bacterial - genetics | Histocompatibility Antigens Class I - metabolism | Herpesvirus 8, Human - pathogenicity | Base Sequence | Gene Deletion | Cloning, Molecular | Plasmids - genetics | Viral Proteins - physiology | Vero Cells | Herpesvirus 8, Human - physiology | Genome, Viral | Immediate-Early Proteins - physiology | Viral Proteins - genetics | Herpesvirus 8, Human - genetics | Host-Pathogen Interactions | Animals | Immediate-Early Proteins - genetics | Escherichia coli - genetics | Gene Expression Regulation, Viral | Cell Line, Tumor | Mutation | DNA, Viral - genetics | Genome and Regulation of Viral Gene Expression
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3. Full Text KSHV and the pathogenesis of Kaposi sarcoma: Listening to human biology and medicine
by Ganem, Don
Journal of Clinical Investigation, ISSN 0021-9738, 04/2010, Volume 120, Issue 4, pp. 939 - 949
The linkage of Kaposi sarcoma (KS) to infection by a novel human herpesvirus (Kaposi sarcoma-associated herpesvirus [KSHV]) is one of the great successes of... 
MEDICINE, RESEARCH & EXPERIMENTAL | PRIMARY-EFFUSION LYMPHOMA | PRIMARY ENDOTHELIAL-CELLS | PROTEIN-COUPLED RECEPTOR | RECONSTITUTION INFLAMMATORY SYNDROME | LYTIC CYCLE REPLICATION | LATENTLY INFECTED-CELLS | HERPESVIRUS-ENCODED INTERLEUKIN-6 | NF-KAPPA-B | MULTICENTRIC CASTLEMANS-DISEASE | HOST GENE-EXPRESSION | Herpesvirus 8, Human - pathogenicity | Virus Replication | Virus Latency | Humans | Herpesvirus 8, Human - genetics | Sarcoma, Kaposi - etiology | Sarcoma, Kaposi - virology | Viral Tropism | Herpesvirus 8, Human - physiology | Development and progression | Usage | Genetic aspects | Herpesviruses | Epidemiologic methods | Kaposi's sarcoma | Science in Medicine
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4. Full Text Simultaneous detection of dual nucleic acids using a SERS-based lateral flow assay biosensor
by Wang, Xiaokun and Choi, Namhyun and Cheng, Ziyi and Ko, Juhui and Chen, Lingxin and Choo, Jaebum
Analytical Chemistry, ISSN 0003-2700, 2017, Volume 89, Issue 2, pp. 1163 - 1169
A new class of surface-enhanced Raman scattering (SERS)-based lateral flow assay (LFA) biosensor has been developed for the simultaneous detection of dual DNA... 
MULTICOLOR QUANTUM DOTS | GOLD | HERPESVIRUS | CHEMISTRY, ANALYTICAL | QUANTITATIVE DETECTION | NANOPROBES | KAPOSIS-SARCOMA | BACILLARY ANGIOMATOSIS | AIDS | IMMUNOASSAY | POINT | Bartonella henselae - genetics | Humans | DNA Probes - chemistry | DNA, Viral - analysis | Herpesvirus 8, Human - genetics | Herpesviridae Infections - virology | Equipment Design | Bartonella henselae - isolation & purification | Angiomatosis, Bacillary - microbiology | DNA - genetics | Herpesvirus 8, Human - isolation & purification | DNA, Bacterial - genetics | DNA - analysis | DNA Probes - genetics | Biosensing Techniques - instrumentation | DNA, Bacterial - analysis | Spectrum Analysis, Raman - instrumentation | DNA, Viral - genetics | Reagent Strips - analysis
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5. Full Text Ago HITS-CLIP Expands Understanding of Kaposi's Sarcoma-associated Herpesvirus miRNA Function in Primary Effusion Lymphomas
by Haecker, Irina and Gay, Lauren A and Yang, Yajie and Hu, Jianhong and Morse, Alison M and McIntyre, Lauren M and Renne, Rolf
PLoS Pathogens, ISSN 1553-7366, 08/2012, Volume 8, Issue 8, p. e1002884
KSHV is the etiological agent of Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and a subset of multicentricCastleman's disease (MCD). The fact that... 
STATISTICAL-METHODS | DNA-SEQUENCES | WIDE IDENTIFICATION | VIRUS-ENCODED MICRORNAS | MICROBIOLOGY | MONOCLONAL-ANTIBODY | BINDING PROTEIN | CELLULAR GENE-EXPRESSION | VIROLOGY | HUMAN GAMMA-HERPESVIRUSES | RNA-SEQ | PARASITOLOGY | TRANSGENIC MICE | Lymphoma, Primary Effusion - metabolism | Cell Cycle - genetics | Cell Line | Cyclin D1 - metabolism | Sarcoma, Kaposi - metabolism | Humans | Apoptosis - genetics | Herpesvirus 8, Human - genetics | Lymphoma, Primary Effusion - virology | MicroRNAs - metabolism | Sarcoma, Kaposi - virology | RNA, Neoplasm - metabolism | RNA, Viral - genetics | Cyclin D1 - genetics | Herpesvirus 8, Human - metabolism | RNA, Neoplasm - genetics | MicroRNAs - genetics | RNA, Viral - metabolism | Lymphoma, Primary Effusion - genetics | Sarcoma, Kaposi - genetics | RNA | Viral genetics | Kaposi's sarcoma | Physiological aspects | Development and progression | Genetic aspects | Lymphomas | Herpesviruses | Research | Virulence (Microbiology) | Health aspects | Cancer | Pathogenesis | Herpes viruses | Cell cycle | Gene expression | Bioinformatics | Kaposis sarcoma | Tumors | Apoptosis
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6. Full Text KSHV 2.0: A Comprehensive Annotation of the Kaposi's Sarcoma-Associated Herpesvirus Genome Using Next-Generation Sequencing Reveals Novel Genomic and Functional Features
by Arias, Carolina and Weisburd, Ben and Stern-Ginossar, Noam and Mercier, Alexandre and Madrid, Alexis S and Bellare, Priya and Holdorf, Meghan and Weissman, Jonathan S and Ganem, Don
PLoS Pathogens, ISSN 1553-7366, 01/2014, Volume 10, Issue 1, p. e1003847
Productive herpesvirus infection requires a profound, time-controlled remodeling of the viral transcriptome and proteome. To gain insights into the genomic... 
Cell Line | Genome, Viral | RNA, Viral - genetics | Humans | Open Reading Frames | Herpesvirus 8, Human - genetics | Gene Expression Regulation, Viral - genetics | High-Throughput Nucleotide Sequencing | RNA, Untranslated - genetics | RNA sequencing | Microbiological research | Human herpesvirus 8 | Messenger RNA | Genetic research | Genetic aspects | Research | Genetic transcription | Health aspects | Reading | Architecture | Genomics | Deoxyribonucleic acid | DNA | Editing | Infections | Genomes | Gene expression | Kaposis sarcoma
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7. Full Text Epigenetic Regulation of Kaposi's Sarcoma-Associated Herpesvirus Latency by Virus-Encoded MicroRNAs That Target Rta and the Cellular Rbl2-DNMT Pathway
by Fang Lu and William Stedman and Malik Yousef and Rolf Renne and Paul M. Lieberman
Journal of Virology, ISSN 0022-538X, 03/2010, Volume 84, Issue 6, pp. 2697 - 2706
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
CONTROL REGION | METHYLATION | ACTIVATION | VIROLOGY | DNA METHYLTRANSFERASE-1 | SEQUENCES | NUCLEAR ANTIGEN | X PROTEIN | GENE-EXPRESSION | DOWN-REGULATION | INFECTION | Epigenesis, Genetic | Humans | Open Reading Frames | Molecular Sequence Data | MicroRNAs - metabolism | DNA (Cytosine-5-)-Methyltransferases - metabolism | Immediate-Early Proteins - metabolism | RNA, Viral - genetics | Herpesvirus 8, Human - metabolism | Retinoblastoma-Like Protein p130 - metabolism | Base Sequence | Gene Deletion | Trans-Activators - genetics | RNA, Viral - metabolism | Herpesvirus 8, Human - physiology | Genome, Viral | DNA (Cytosine-5-)-Methyltransferase 1 | Herpesvirus 8, Human - genetics | DNA (Cytosine-5-)-Methyltransferases - genetics | Sequence Alignment | Immediate-Early Proteins - genetics | Gene Expression Regulation, Viral | Signal Transduction - physiology | Trans-Activators - metabolism | MicroRNAs - genetics | Retinoblastoma-Like Protein p130 - genetics | Virus Latency - genetics | Virus-Cell Interactions
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8. Full Text Human herpesvirus 8 interleukin-6 interacts with calnexin cycle components and promotes protein folding
by Chen, Daming and Xiang, Qiwang and Nicholas, John
Journal of Virology, ISSN 0022-538X, 11/2017, Volume 91, Issue 22
Viral interleukin-6 (vIL-6) encoded by human herpesvirus 8 (HHV-8) is believed to contribute via mitogenic, survival, and angiogenic activities to... 
Human herpesvirus 8 | Protein folding | UDP-glucose:glycoprotein glucosyltransferase 1 | VKORC1v2 | Calnexin cycle | Glucosidase II | Endoplasmic reticulum | Viral interleukin-6 | calnexin cycle | VARIANT 2 | BACTERIAL ARTIFICIAL CHROMOSOME | PRIMARY EFFUSION LYMPHOMA | GP130 | viral interleukin-6 | UDP-glucose: glycoprotein glucosyltransferase 1 | ENDOPLASMIC-RETICULUM STRESS | human herpesvirus 8 | REDUCTASE COMPLEX SUBUNIT-1 | glucosidase II | VIROLOGY | VIRUS-REPLICATION | ENDOTHELIAL-CELLS | protein folding | endoplasmic reticulum | GLUCOSIDASE-II | Cytokine Receptor gp130 - metabolism | Endoplasmic Reticulum - genetics | Interleukin-6 - genetics | Cytokine Receptor gp130 - genetics | Sarcoma, Kaposi - metabolism | Humans | Endoplasmic Reticulum - metabolism | Endoplasmic Reticulum - virology | Viral Proteins - genetics | Herpesvirus 8, Human - genetics | Vitamin K Epoxide Reductases - metabolism | Viral Proteins - metabolism | Protein Folding | Glucosyltransferases - metabolism | Herpesvirus 8, Human - metabolism | HEK293 Cells | Interleukin-6 - metabolism | Sarcoma, Kaposi - genetics | Glucosyltransferases - genetics | Vitamin K Epoxide Reductases - genetics
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9. Full Text Molecular Genetics of Kaposi's Sarcoma-Associated Herpesvirus (Human Herpesvirus 8) Epidemiology and Pathogenesis
by Lyubomir A. Dourmishev and Assen L. Dourmishev and Diana Palmeri and Robert A. Schwartz and David M. Lukac
Microbiology and Molecular Biology Reviews, ISSN 1092-2172, 06/2003, Volume 67, Issue 2, pp. 175 - 212
Article Usage Stats Services MMBR Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
PRIMARY-EFFUSION LYMPHOMA | READING FRAME 50 | PROTEIN-COUPLED RECEPTOR | ACTIVE ANTIRETROVIRAL THERAPY | MICROBIOLOGY | HUMAN-IMMUNODEFICIENCY-VIRUS | MULTICENTRIC CASTLEMANS-DISEASE | INTERFERON REGULATORY FACTOR | EPSTEIN-BARR-VIRUS | LATENT NUCLEAR ANTIGEN | BLOOD MONONUCLEAR-CELLS | Virus Activation - physiology | Humans | DNA, Viral - metabolism | Viral Proteins - genetics | Herpesvirus 8, Human - genetics | Virus Activation - genetics | Sarcoma, Kaposi - virology | Herpesviridae Infections - virology | Viral Proteins - metabolism | Immediate-Early Proteins - metabolism | Animals | Immediate-Early Proteins - genetics | Trans-Activators - genetics | Trans-Activators - metabolism | Mice | DNA, Viral - genetics | Sarcoma, Kaposi - epidemiology | Herpesviridae Infections - epidemiology | Reviews
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10. Full Text Specific Capture and Whole-Genome Sequencing of Viruses from Clinical Samples
by Depledge, Daniel P and Palser, Anne L and Watson, Simon J and Lai, Imogen Yi-Chun and Gray, Eleanor R and Grant, Paul and Kanda, Ravinder K and Leproust, Emily and Kellam, Paul and Breuer, Judith
PLoS ONE, ISSN 1932-6203, 2011, Volume 6, Issue 11, p. e27805
Whole genome sequencing of viruses directly from clinical samples is integral for understanding the genetics of host-virus interactions. Here, we report the... 
GENOTYPES | VARIABILITY | RECOMBINATION | AMPLIFICATION | COMPLETE DNA-SEQUENCES | VARICELLA-ZOSTER-VIRUS | VACCINE | BIOLOGY | IDENTIFICATION | CARCINOMA | EPSTEIN-BARR-VIRUS | Herpesviridae Infections - cerebrospinal fluid | Reproducibility of Results | Herpesvirus 4, Human - genetics | Species Specificity | Genome, Viral - genetics | Humans | Herpesvirus 8, Human - genetics | Herpesviridae Infections - virology | Herpesvirus 3, Human - genetics | Saliva - virology | DNA, Viral - chemistry | Herpesviridae - genetics | Polymerase Chain Reaction | Cell Line, Tumor | Mutation | DNA, Viral - genetics | Herpesviridae - classification | Herpesviridae Infections - blood | Sequence Analysis, DNA - methods | Genomics | Amino acids | Genetic aspects | Genomes | Nucleic acids | Nucleotide sequencing | DNA sequencing | Pathogenesis | Chicken pox | Viruses | Population studies | Infections | Cerebrospinal fluid | Vaccines | Tumor cell lines | College campuses | Gene sequencing | Acquired immune deficiency syndrome--AIDS | Human immunodeficiency virus--HIV | Cell lines | Population | Genetics | Lymphomas | Drug therapy | Saliva | Bioinformatics | Deoxyribonucleic acid--DNA | Methods | Tumors | Acquired immune deficiency syndrome | Deoxyribonucleic acid | AIDS | HIV | DNA | Human immunodeficiency virus
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11. Full Text Plasmid partitioning by human tumor viruses
by Chiu, Ya-Fang and Sugden, Bill
Journal of Virology, ISSN 0022-538X, 05/2018, Volume 92, Issue 9
The human tumor viruses that replicate as plasmids (we use the term plasmid to avoid any confusion in the term episome, which was coined to mean DNA elements... 
Partitioning | Human tumor viruses | Synthesis | synthesis | HUMAN-PAPILLOMAVIRUS TYPE-16 | LATENTLY INFECTED-CELLS | SARCOMA-ASSOCIATED HERPESVIRUS | STABLE REPLICATION | VIRAL GENOME | human tumor viruses | NUCLEAR ANTIGEN LANA | DNA-REPLICATION | VIROLOGY | KAPOSIS-SARCOMA | partitioning | TERMINAL REPEAT | EPSTEIN-BARR-VIRUS | Herpesvirus 4, Human - genetics | DNA, Viral - biosynthesis | Humans | Plasmids - genetics | DNA Replication - genetics | Herpesvirus 8, Human - genetics | DNA, Viral - genetics | Mitosis - genetics | Papillomaviridae - genetics | Replicon - genetics
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12. Full Text A viral microRNA functions as an orthologue of cellular miR-155
by Gottwein, Eva and Mukherjee, Neelanjan and Sachse, Christoph and Frenzel, Corina and Majoros, William H and Chi, Jen-Tsan A and Braich, Ravi and Manoharan, Muthiah and Soutschek, Jürgen and Ohler, Uwe and Cullen, Bryan R
Nature, ISSN 0028-0836, 12/2007, Volume 450, Issue 7172, pp. 1096 - 1099
All metazoan eukaryotes express microRNAs ( miRNAs), roughly 22- nucleotide regulatory RNAs that can repress the expression of messenger RNAs bearing... 
CELLS | KAPOSIS-SARCOMA | THOUSANDS | MULTIDISCIPLINARY SCIENCES | SARCOMA-ASSOCIATED HERPESVIRUS | RNAS | LYMPHOMA | TARGETS | EXPRESSION | GENOME | Cell Line | Basic-Leucine Zipper Transcription Factors - metabolism | Humans | Fanconi Anemia Complementation Group Proteins - genetics | Gene Expression Regulation | Proto-Oncogene Proteins c-fos - metabolism | 3' Untranslated Regions - genetics | Substrate Specificity | 3' Untranslated Regions - metabolism | Herpesvirus 8, Human - genetics | MicroRNAs - metabolism | Gene Expression Profiling | Basic-Leucine Zipper Transcription Factors - genetics | Sequence Homology, Nucleic Acid | Fanconi Anemia Complementation Group Proteins - metabolism | RNA, Viral - genetics | Cell Transformation, Viral - genetics | Proto-Oncogene Proteins c-fos - genetics | MicroRNAs - genetics | RNA, Viral - metabolism | B-Lymphocytes - pathology | B-Lymphocytes - metabolism | Cell growth | Cellular biology | Ribonucleic acid | Herpes viruses | Viruses | Molecular biology | Gene expression | Ribonucleic acid--RNA | Kaposis sarcoma | Cellular | Control | Ribonucleic acids | Genes | Deoxyribonucleic acid | Replication | Transformations
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