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1. Full Text Designer proteins: Applications of genetic code expansion in cell biology
by Davis, Lloyd and Chin, Jason W
Nature Reviews Molecular Cell Biology, ISSN 1471-0072, 03/2012, Volume 13, Issue 3, pp. 168 - 182
Designer amino acids, beyond the canonical 20 that are normally used by cells, can now be site-specifically encoded into proteins in cells and organisms. This... 
GREEN FLUORESCENT PROTEIN | UBIQUITIN CHAINS | PHOTO-CROSS-LINKING | IN-VIVO INCORPORATION | HISTONE H3 | ESCHERICHIA-COLI | UNNATURAL AMINO-ACIDS | SITE-SPECIFIC INCORPORATION | MAMMALIAN-CELLS | SACCHAROMYCES-CEREVISIAE | CELL BIOLOGY | Recombinant Proteins - metabolism | Genetic Code | Signal Transduction | Humans | Models, Molecular | Recombinant Proteins - chemistry | Recombinant Proteins - genetics | Protein Interaction Mapping - methods | Animals | Protein Engineering | Protein Binding | Protein Conformation | Protein Processing, Post-Translational | Post-translational modification | Physiological aspects | Caenorhabditis elegans | Genetic aspects | Research | Transfer RNA
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2. Full Text Reprogramming the genetic code
by Chin, Jason W
The EMBO Journal, ISSN 0261-4189, 06/2011, Volume 30, Issue 12, pp. 2312 - 2324
In this essay, Jason Chin gives an account of his career and of the seminal works on reprogramming translation to generate custom‐modified proteins that has... 
acetylation | genetic code expansion | ubiquitination | signalling | post‐translational modification | post-translational modification | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | HISTONE-H3 LYSINE-56 | UNNATURAL AMINO-ACIDS | MAMMALIAN-CELLS | CELL BIOLOGY | UBIQUITIN CHAINS | PHOTO-CROSS-LINKING | PROTEIN-COUPLED RECEPTOR | IN-VIVO | SITE-SPECIFIC INCORPORATION | TRANSFER-RNA-SYNTHETASE | Amino Acyl-tRNA Synthetases - genetics | Genetic Code | History, 21st Century | Protein Engineering - methods | History, 20th Century | Protein Processing, Post-Translational - genetics | Mutagenesis, Site-Directed - methods | Protein Engineering - history | Aminoacylation - genetics | Ribosomes - enzymology | Protein Interaction Mapping - methods | Animals | Mutagenesis, Site-Directed - history | Ribosomes - genetics | Amino Acyl-tRNA Synthetases - history | Protein Interaction Mapping - history | Atoms & subatomic particles | Molecules | Scientists | Tissue engineering | EMBO Medal Review
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3. Full Text Beyond the genetic code in leaf senescence
by Yolcu, Seher and Li, Xiaojie and Li, Shengben and Kim, Yun Ju
Journal of Experimental Botany, ISSN 0022-0957, 02/2018, Volume 69, Issue 4, pp. 801 - 810
Leaf senescence, which is both endogenously programmed and stress-induced, is regulated by genetic factors in concert with multiple layers of epigenetic... 
genetic reprogramming | Epigenetic regulation | histone modification | senescence-associated genes | leaf senescence | small RNAs | DNA METHYLATION | DROUGHT STRESS | DOWN-REGULATION | HISTONE METHYLATION | CHROMATIN ARCHITECTURE | CELL-DEATH | PLANT SCIENCES | REGULATORY NETWORKS | AGE-ASSOCIATED ALTERATIONS | TRANSCRIPTION FACTOR
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4. Full Text Genetic code expansion in stable cell lines enables encoded chromatin modification
by Elsässer, Simon J and Ernst, Russell J and Walker, Olivia S and Chin, Jason W
Nature Methods, ISSN 1548-7091, 02/2016, Volume 13, Issue 2, pp. 158 - 164
Genetically encoded unnatural amino acids provide powerful strategies for modulating the molecular functions of proteins in mammalian cells. However, this... 
MUTAGENESIS | HISTONE H3 | ACETYLATION | LYSINE | BIOCHEMICAL RESEARCH METHODS | UNNATURAL AMINO-ACIDS | PROTEIN FUNCTION | EXPRESSION | Amino Acyl-tRNA Synthetases - genetics | Cell Line | Embryonic Stem Cells - metabolism | Methanosarcina - enzymology | Humans | Gene Expression Regulation, Enzymologic - physiology | Amino Acids - metabolism | Animals | Genetic Engineering | Chromatin - physiology | HEK293 Cells | Methanosarcina - metabolism | Mice | Amino Acyl-tRNA Synthetases - metabolism | Fibroblasts - metabolism | Chromatin | Stem cells | Genetic research | Amino acids | Genetic aspects | Genetic transcription | Research | Properties | Proteins | Genetics | Cellular biology
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5. Full Text Genetic-code evolution for protein synthesis with non-natural amino acids
by Mukai, Takahito and Yanagisawa, Tatsuo and Ohtake, Kazumasa and Wakamori, Masatoshi and Adachi, Jiro and Hino, Nobumasa and Sato, Aya and Kobayashi, Takatsugu and Hayashi, Akiko and Shirouzu, Mikako and Umehara, Takashi and Yokoyama, Shigeyuki and Sakamoto, Kensaku
Biochemical and Biophysical Research Communications, ISSN 0006-291X, 08/2011, Volume 411, Issue 4, pp. 757 - 761
► Three different codons specify translation stop in the genetic code. ► The definition of a stop codon was completely changed in . ► The bacteria produced... 
Non-natural amino acid | Post-translational modification | Genetic code | Protein engineering | Codon reassignment | REASSIGNMENT | CELLS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | LYSINE | HISTONES | TRANSFER-RNA SYNTHETASES | BIOPHYSICS | PURIFICATION | EXPRESSION | Directed Molecular Evolution - methods | Genetic Code | Peptide Termination Factors - genetics | Codon, Terminator - genetics | Amino Acids - chemistry | Amino Acids - genetics | Gene Knockout Techniques | Histones - genetics | Escherichia coli - genetics | Plasmids - genetics | Escherichia coli Proteins - genetics | Peptide Chain Termination, Translational - genetics | Protein Biosynthesis - genetics | Histones - metabolism | Evolution, Molecular | Proteins | Protein biosynthesis | Amino acids | Codon
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6. Full Text Expanded Genetic Code Technologies for Incorporating Modified Lysine at Multiple Sites
by Yanagisawa, Tatsuo and Umehara, Takashi and Sakamoto, Kensaku and Yokoyama, Shigeyuki
ChemBioChem, ISSN 1439-4227, 10/2014, Volume 15, Issue 15, pp. 2181 - 2187
Protein engineering: Recent methods that enable site‐specific installation of naturally occurring modified lysine at multiple sites in proteins are reviewed.... 
lysine | protein engineering | genetic code expansion | tRNA | post‐translational modification | Post-translational modification | Protein engineering | Genetic code expansion | Lysine | TRNA | post-translational modification | CHEMISTRY, MEDICINAL | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | FREE PROTEIN-SYNTHESIS | UNNATURAL AMINO-ACIDS | CHAIN TERMINATION | MAMMALIAN-CELLS | YEAST SILENT CHROMATIN | RECOMBINANT PROTEINS | HISTONE MODIFICATIONS | METHYL-LYSINE | TRANSFER-RNA-SYNTHETASE | Proteins - genetics | Lysine - genetics | Genetic Code | Genetic Engineering | Proteins - metabolism | Humans | Molecular Conformation | Protein Engineering | Models, Molecular | Lysine - metabolism | Proteins - chemistry | Lysine - chemistry | Genetic code | Transfer RNA
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7. Full Text Third Genetic Code Anyone?
by North, Geoffrey
Current Biology, ISSN 0960-9822, 03/2011, Volume 21, Issue 6, pp. R203 - R203
BIOCHEMISTRY & MOLECULAR BIOLOGY | CELL BIOLOGY | Terminology as Topic | Genetic Code - genetics | Histones - genetics | RNA Nucleotidyltransferases - genetics
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8. Biochimica et biophysica acta
: Gene structure and expression
Biochimica et biophysica acta, ISSN 0167-4781, 1982
Genetic code | Code génétique | Expression génique | Gene expression
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9. Full Text Comparative evaluation of two cell-free protein synthesis systems derived from Escherichia coli for genetic code reprogramming
by Lee, Ki Baek and Kim, Dong-Myung and Kim, Ho-Cheol and Kang, Taek Jin and Suga, Hiroaki
Journal of Biotechnology, ISSN 0168-1656, 03/2013, Volume 164, Issue 2, pp. 330 - 335
► A reliable and robust system for genetic code reprogramming was to be suggested. ► Two cell-free protein synthesis systems, S12 and PURE, were evaluated. ►... 
Cell-free protein synthesis | Flexizyme | Non-proteinogenic amino acid | Methyllysine | Genetic code reprogramming | Acetyllysine | EVOLUTION | PEPTIDES | NONNATURAL AMINO-ACIDS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | RIBOSOMAL SYNTHESIS | EXPRESSION | Recombinant Proteins - metabolism | Biotechnology | Genetic Code | Protein Engineering - methods | Histones - chemistry | Humans | Recombinant Proteins - chemistry | Recombinant Proteins - genetics | Histones - genetics | Cell-Free System | Escherichia coli - genetics | Models, Biological | Protein Processing, Post-Translational | Codon - genetics | Histones - metabolism | Post-translational modification | Genetic code | Fine chemicals | Escherichia coli | Protein biosynthesis | Amino acids | Genetic aspects | Comparative analysis
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10. Full Text Two independent transcription initiation codes overlap on vertebrate core promoters
by Haberle, Vanja and Li, Nan and Hadzhiev, Yavor and Plessy, Charles and Previti, Christopher and Nepal, Chirag and Gehrig, Paola A and Dong, Xianjun and Akalin, Altuna and Suzuki, Ana Maria and IJcken, Wilfred and Armant, Olivier and Ferg, Marco and Strähle, Uwe and Carninci, Piero and Müller, Ferenc and Lenhard, Boris
Nature: international weekly journal of science, ISSN 0028-0836, 01/2014, Volume 507, Issue 7492, pp. 381 - 385
textabstractA core promoter is a stretch of DNA surrounding the transcription start site (TSS) that integrates regulatory inputs and recruits general... 
ORGANIZATION | TRANSITION | GENOME ACTIVATION | ZEBRAFISH | MULTIDISCIPLINARY SCIENCES | RESOLUTION | COMPLEXES | GENE-EXPRESSION | ARCHITECTURE | CPG ISLANDS | CAP ANALYSIS | Embryo, Nonmammalian - metabolism | Zygote - metabolism | Gene Expression Regulation, Developmental - genetics | Embryo, Nonmammalian - embryology | Nucleosomes - genetics | Transcriptome - genetics | Zebrafish - embryology | Mothers | Promoter Regions, Genetic - genetics | Zebrafish - genetics | Animals | Base Sequence | Transcription Initiation Site | Female | Histones - metabolism | Transcription Initiation, Genetic | Methylation | Genetic research | Genetic code | Promoters (Genetics) | Genetic transcription | Research | Gene expression | Vertebrates | Embryos | Index Medicus
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