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BMC Bioinformatics, ISSN 1471-2105, 04/2018, Volume 19, Issue Suppl 5, pp. 115 - 22
Journal Article
Data in Brief, ISSN 2352-3409, 04/2018, Volume 17, pp. 662 - 666
The genetic reprogramming technology allows generation of induced pluripotent stem cells (iPSCs) from somatic cells (Takahashi and Yamanaka, 2006) . iPSCs have... 
DNA methylation | Lentiviral reprogramming | Illumina 450К Methylation BeadChip | Sendai virus reprogramming | Induced pluripotent stem cells
Journal Article
Epigenomics, ISSN 1750-1911, 05/2018, Volume 10, Issue 5, pp. 643 - 659
Aim: We aimed to prove the existence of positional effects in the Illumina methylation beadchip data and to find an optimal correction method. Materials &... 
positional effects | ComBat | DNA methylation | Infinium Methylation 450K | epigenomics | Illumina Infinium MethylationEPIC BeadChip | epigenetics | Infinium Methylation 27K | VALIDATION | INFINIUM HUMANMETHYLATION450 MICROARRAY | HYPOMETHYLATION | RANDOMIZATION | PACKAGE | GENETICS & HEREDITY | HUMAN-DISEASES | NORMALIZATION | EXPRESSION | BRAIN
Journal Article
Journal Article
Environment International, ISSN 0160-4120, 11/2017, Volume 108, pp. 127 - 136
Long-term exposure to air pollution has been associated with several adverse health effects including cardiovascular, respiratory diseases and cancers.... 
Air pollution | EPIC | Particulate matter | NOx | Illumina 450 k human methylation array | Epigenome-wide DNA methylation | PROFILES | GENE-SPECIFIC METHYLATION | ASSOCIATIONS | POLLUTANTS | USE REGRESSION-MODELS | DIOXIDE | MARKERS | BIOMARKERS | LUNG-CANCER | ENVIRONMENTAL SCIENCES | EXPRESSION | Air Pollutants - analysis | Gene Expression | Genome-Wide Association Study | Epigenomics | Prospective Studies | Air Pollutants - pharmacology | Humans | Middle Aged | European Continental Ancestry Group | Male | Environmental Exposure - analysis | Particulate Matter - analysis | Soot - analysis | Female | Air Pollution - analysis | Cardiovascular Diseases - chemically induced | DNA Methylation - drug effects | Cohort Studies | Analysis | Genes | Genomics | DNA | Genetic research | Respiratory tract diseases | Genomes | Pollutants | Methylation | Gene expression | Environmental aspects | Index Medicus | Metilació | Aire | Contaminació | Illumina 450k human methylation array | Aspectes sanitaris | NO(x) | ADN | EpWAS, epigenome-wide association study | PMcoarse, particulate matter with a diameter smaller than 10 μm and bigger than 2.5 μm | Illumina 450 k human methylation array | LUMA, luminometric methylation assay | EPIC-NL, The Dutch part of the European Prospective Investigation into Cancer and Nutrition | PM2.5, particulate matter with a diameter smaller than 2.5 μm | NOx, nitrogen oxide | EPIC-Italy, The Italian part of the European Prospective Investigation into Cancer and Nutrition | LC-MS, liquid chromatography–mass spectrometry | ELISA, enzyme-linked immunosorbent assay | PM2.5abs, absorbance of the PM2.5 filter, a measure for soot | PM, particulate matter | HPLC, high-performance liquid chromatography | PM10, particulate matter with a diameter smaller than 10 μm | LINE1, long interspersed nuclear elements | CpG, 5′–C–phosphate–G–3′, a cytosine and guanine separated by one phosphate | ESCAPE, European Study of Cohorts for Air Pollution Effects | CPMA, cross-phenotype meta-analysis | NO2, nitrogen dioxide
Journal Article
Cancer Medicine, ISSN 2045-7634, 07/2015, Volume 4, Issue 7, pp. 1079 - 1090
Altered patterns of DNA methylation are key features of cancer. Nasopharyngeal carcinoma (NPC) has the highest incidence in Southern China. Aberrant... 
EBV | methylome | Chromosome 6p | nasopharyngeal carcinoma | Illumina HumanMethylation450 | Nasopharyngeal carcinoma | Methylome | NPC | IDENTIFY | DNA METHYLATION | SUPPRESSOR GENE | CANCER | MOLECULAR-GENETIC BASIS | MULTIPLE | ONCOLOGY | NORMALIZATION | EXPRESSION | EPSTEIN-BARR-VIRUS | Neoplasms - metabolism | Nasopharyngeal Neoplasms - genetics | Promoter Regions, Genetic | Meta-Analysis as Topic | Nasopharyngeal Carcinoma | Nasopharyngeal Neoplasms - metabolism | Carcinoma | Epigenesis, Genetic | Humans | Computational Biology | Gene Expression Regulation, Neoplastic | Transcriptome | Gene Expression Profiling | Chromosomes, Human, Pair 6 | Nasopharyngeal Neoplasms - pathology | DNA Methylation | Epigenomics - methods | Neoplasms - genetics | CpG Islands | Histones - metabolism | Methylation | Neoplasms - pathology | Sulfites | Epigenetic inheritance | Genomics | Genetic research | Genetic aspects | Comparative analysis | Embryonic stem cells | Health aspects | Cancer | Deregulation | Bisulfite | Genes | Embryo cells | Genomes | Ovarian cancer | DNA methylation | Chromosomes | Gastric cancer | Deoxyribonucleic acid--DNA | CpG islands | Therapeutic applications | Chromosome 6 | Studies | Polycomb group proteins | Biopsy | Stem cells | Epigenetics | Biomarkers | Genetic testing | Solid tumors | Prostate | Tumors | Cancer Biology
Journal Article
Epigenetics and Chromatin, ISSN 1756-8935, 01/2015, Volume 8, Issue 1, pp. 6 - 6
Background: The identification and characterisation of differentially methylated regions (DMRs) between phenotypes in the human genome is of prime interest in... 
Differential DNA methylation | Illumina | Kernel smoothing | REGRESSION | ARRAY | DNA METHYLATION | GENETICS & HEREDITY | CANCER GENOME | VALIDATION | R PACKAGE | TISSUES | DISCOVERY | Epigenetic inheritance | Sulfites | Human genome | Analysis | Genomics | Rankings | Methylation | Biotechnology industry
Journal Article