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1. Full Text A communal catalogue reveals Earth's multiscale microbial diversity
by Thompson, Luke R and Sanders, Jon G and McDonald, Daniel and Amir, Amnon and Ladau, Joshua and Locey, Kenneth J and Prill, Robert J and Tripathi, Anupriya and Gibbons, Sean M and Ackermann, Gail and Navas-Molina, Jose A and Janssen, Stefan and Kopylova, Evguenia and Vazquez-Baeza, Yoshiki and Gonzalez, Antonio and Morton, James T and Mirarab, Siavash and Xu, Zhenjiang Zech and Jiang, Lingjing and Haroon, Mohamed F and Kanbar, Jad and Zhu, Qiyun and Song, Se Jin and Kosciolek, Tomasz and Bokulich, Nicholas A and Lefler, Joshua and Brislawn, Colin J and Humphrey, Gregory and Owens, Sarah M and Hampton-Marcell, Jarrad and Berg-Lyons, Donna and McKenzie, Valerie and Fierer, Noah and Fuhrman, Jed A and Clauset, Aaron and Stevens, Rick L and Shade, Ashley and Pollard, Katherine S and Goodwin, Kelly D and Jansson, Janet K and Gilbert, Jack A and Knight, Rob and Earth Microbiome Project Consortiu and Earth Microbiome Project Consortium and The Earth Microbiome Project Consortium and Argonne National Lab. (ANL), Argonne, IL (United States) and Pacific Northwest National Lab. (PNNL), Richland, WA (United States) and Naturvetenskapliga fakulteten and Faculty of Sciences and Göteborgs universitet and Gothenburg University and Institutionen för marina vetenskaper and Department of marine sciences
Nature (London), ISSN 0028-0836, 11/2017, Volume 551, Issue 7681, pp. 457 - +
CONSISTENT | ARCHAEAL | EVOLUTION | MARINE BACTERIAL | GLOBAL PATTERNS | BACTERIAL DIVERSITY | OPERON COPY NUMBER | ONTOLOGY | COMMUNITIES | NESTEDNESS | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Humans | RNA, Ribosomal, 16S - analysis | Geographic Mapping | Plants - microbiology | Gene Dosage | Archaea - isolation & purification | Biodiversity | Bacteria - genetics | Bacteria - isolation & purification | Ecology - methods | Animals | Microbiota - genetics | RNA, Ribosomal, 16S - genetics | Archaea - genetics | Earth, Planet | Environmental aspects | Observations | Microbial colonies | Biological diversity | Microbiological research | Ribosomal RNA | Analysis | Distribution | Genetic aspects | Research | Identification and classification | Catalogs | International marketing | Nucleotide sequencing | DNA sequencing | Analytical methods | Nucleotide sequence | Microbiology | Taxonomy | rRNA | Ecology | Genomes | Ribonucleic acid--RNA | Gene sequencing | Meta-analysis | Earth | Studies | Microorganisms | Phylogenetics | Bacteria | Deoxyribonucleic acid--DNA | Index Medicus | ENVIRONMENTAL SCIENCES | global | BASIC BIOLOGICAL SCIENCES | microbiome | Geosciences, Multidisciplinary | Climate Research | Klimatforskning | Oceanografi, hydrologi, vattenresurser | Oceanography, Hydrology, Water Resources | Annan geovetenskap och miljövetenskap | Multidisciplinär geovetenskap | Ekologi | Other Earth and Related Environmental Sciences | CVI Infection Biology | CVI Infectiebiologie | Food Quality and Design | VLAG | Infectiebiologie | Infection Biology
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2. Full Text Meta-analysis reveals that pollinator functional diversity and abundance enhance crop pollination and yield
by Woodcock, B.A and Garratt, M.P.D and Powney, G.D and Shaw, R.F and Osborne, J.L and Soroka, J and Lindström, S.A.M and Stanley, D and Ouvrard, P and Edwards, M.E and Jauker, F and McCracken, M.E and Zou, Y and Potts, S.G and Rundlöf, M and Noriega, J.A and Greenop, A and Smith, H.G and Bommarco, R and Werf, van der, W and Stout, J.C and Steffan-Dewenter, I and Morandin, L and Bullock, J.M and Pywell, R.F
Nature communications, ISSN 2041-1723, 2019, Volume 10, Issue 1, pp. 1481 - 1481
PE&RC | Crop and Weed Ecology | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Animals | Brassica rapa | Crop Production | Insecta | Crops, Agricultural | Biodiversity | Pollination | Agricultural management | Plant reproduction | Divergence | Complementarity | Crops | Rape plants | Abundance | Mesocosms | Hypotheses | Insects | Rapeseed | Correlation analysis | Agricultural production | Dominant species | Crop yield | Species richness | Index Medicus | Biological Sciences | Biologi | Ecology | Naturvetenskap | Natural Sciences | Ekologi | CVI Infection Biology | CVI Infectiebiologie | Centre for Crop Systems Analysis | Infectiebiologie | Infection Biology
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3. Full Text Discovery of Salmonella trehalose phospholipids reveals functional convergence with mycobacteria
by Reinink, Peter and Buter, Jeffrey and Mishra, Vivek K and Ishikawa, Eri and Cheng, Tan Yun and Willemsen, Peter T.J and Porwollik, Steffen and Brennan, Patrick J and Heinz, Eva and Mayfield, Jacob A and Dougan, Gordon and Els, van, Cécile A and Cerundolo, Vincenzo and Napolitani, Giorgio and Yamasaki, Sho and Minnaard, Aiaan J and McClelland, Michael and Moody, D.B and Rhijn, Van, Ildiko
The Journal of experimental medicine, ISSN 0022-1007, 2019, Volume 216, Issue 4, pp. 757 - 771
CVI Infection Biology | CVI Infectiebiologie | Bacteriologie, Host Pathogen Interactie en Diagnostiekontwikkeling | Bacteriology, Host Pathogen Interaction and Diagnostics Development | Infectiebiologie | Infection Biology
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4. Full Text Novel highly pathogenic avian influenza A(H5N6) virus in the Netherlands, december 2017
by Beerens, Nancy and Koch, Guus and Heutink, Rene and Harders, Frank and Vries, D.P.E and Ho, Cynthia and Bossers, Alex and Elbers, Armin
Emerging infectious diseases, ISSN 1080-6040, 2018, Volume 24, Issue 4, pp. 770 - 773
Bacteriologie, Host Pathogen Interactie en Diagnostiekontwikkeling | Epidemiology, Bioinformatics and Animal Studies | Epidemiologie, Bio-informatica en Dierstudies | Bacteriology, Host Pathogen Interaction and Diagnostics Development | CVI Virologie | CVI Bacteriology and Epidemiology | Infection Biology | Virology | Virologie en Moleculaire Biologie | CVI Infection Biology | CVI Infectiebiologie | CVI Virology | Bacteriologie & Epidemiologie | Virology and Molecular Biology | Bacteriology & Epidemiology | Infectiebiologie | Virologie | CVI Bacteriologie en Epidemiologie | Infectious Diseases | Immunology | Life Sciences & Biomedicine | Science & Technology | Avian influenza | Poultry industry | Analysis | Avian influenza viruses | Phylogeny | Ducks | Meat | influenza | highly pathogenic avian influenza | viruses | Dispatch | ducks | respiratory infections | the Netherlands | wild birds | HPAI | H5N6 | genome sequence | Novel Highly Pathogenic Avian Influenza A(H5N6) Virus in the Netherlands, December 2017 | reassortant | clinical signs
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5. Full Text Methods to assess the effect of meat processing on viability of Toxoplasma gondii: towards replacement of mouse bioassay by in vitro testing
by Opsteegh, Marieke and Dam-Deisz, Cecile and de Boer, Paulo and DeCraeye, Stephane and Faré, Andrea and Hengeveld, Paul and Luiten, Ruud and Schares, Gereon and van Solt-Smits, Conny and Verhaegen, Bavo and Verkleij, Theo and van der Giessen, Joke and Wisselink, Henk J
International journal for parasitology, ISSN 0020-7519, 05/2020, Volume 50, Issue 5, pp. 357 - 369
Food safety | Toxoplasma gondii | Inactivation | Viability | Meat | Salting | FBR Food Technology | CVI Infection Biology | CVI Infectiebiologie | Bacteriologie, Host Pathogen Interactie en Diagnostiekontwikkeling | Food Technology | Bacteriology, Host Pathogen Interaction and Diagnostics Development | Infectiebiologie | Infection Biology | Index Medicus
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6. Full Text Reduction of veterinary antimicrobial use in the Netherlands. The Dutch success model
by Speksnijder, D and Mevius, D.J and Bruschke, C.J.M and Wagenaar, J.A
Zoonoses and public health, ISSN 1863-1959, 2015, Volume 62, Issue S1, pp. 79 - 87
CVI Infection Biology | CVI Infectiebiologie | Bacteriologie, Host Pathogen Interactie en Diagnostiekontwikkeling | Bacteriologie & Epidemiologie | Epidemiology, Bioinformatics and Animal Studies | Epidemiologie, Bio-informatica en Dierstudies | Bacteriology & Epidemiology | Bacteriology, Host Pathogen Interaction and Diagnostics Development | CVI Bacteriology and Epidemiology | Infectiebiologie | Infection Biology | CVI Bacteriologie en Epidemiologie | Antimicrobial resistance | veterinary antimicrobial use | public health | livestock | preventive medicine | Livestock | Preventive medicine | Veterinary antimicrobial use | Public health | Veterinary Sciences | Public, Environmental & Occupational Health | Infectious Diseases | Life Sciences & Biomedicine | Science & Technology | Poultry | Humans | Cooperative Behavior | Anti-Bacterial Agents - therapeutic use | Drug Resistance, Microbial | Legislation, Veterinary | Netherlands | Animals | Cattle | Swine | Health Policy - legislation & jurisprudence | Animal Husbandry | Veterinary Medicine - methods | Analysis | Antimicrobial agents | Staphylococcus infections | Index Medicus
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7. Full Text Multiple reassorted viruses as cause of highly pathogenic avian influenza A(H5N8) virus epidemic, the Netherlands, 2016
by Beerens, Nancy and Heutink, Rene and Bergervoet, Saskia A and Harders, Frank and Bossers, Alex and Koch, Guus
Emerging infectious diseases, ISSN 1080-6040, 2017, Volume 23, Issue 12, pp. 1966 - 1973
Virologie en Moleculaire Biologie | CVI Infection Biology | CVI Infectiebiologie | Bacteriologie, Host Pathogen Interactie en Diagnostiekontwikkeling | CVI Virology | Virology and Molecular Biology | Bacteriology, Host Pathogen Interaction and Diagnostics Development | CVI Virologie | Infectiebiologie | Virologie | Infection Biology | Virology | Infectious Diseases | Immunology | Life Sciences & Biomedicine | Science & Technology | Epidemics | Genomics | Genomes | Phylogeny | Russia | Avian influenza | Poultry industry | Mongolia | Netherlands | Analysis | Nucleotide sequencing | Livestock farms | DNA sequencing | Index Medicus | influenza | reassortment | viruses | complete genome sequencing | whole-genome sequencing | epidemic | avian influenza virus | Research | respiratory infections | the Netherlands | phylogenetic analysis | molecular clock | Multiple Reassorted Viruses as Cause of Highly Pathogenic Avian Influenza A(H5N8) Virus Epidemic, the Netherlands, 2016 | H5N8 | highly pathogenic avian influenza virus | outbreak | HPAIV | Holland | whole genome sequencing
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8. Full Text Bacterial Zoonoses Transmitted by Household Pets: State-of-the-Art and Future Perspectives for Targeted Research and Policy Actions
by Damborg, P and Broens, E.M and Chomel, B.B and Guenther, S and Pasmans, F and Wagenaar, J.A and Weese, J.S and Wieler, L.H and Windahl, U and Vanrompay, D and Guardabassi, L
Journal of comparative pathology, ISSN 0021-9975, 07/2016, Volume 155, Issue 1, pp. S27 - S40
antimicrobial resistance | bacterial zoonoses | pet animal | Pets - microbiology | Cats | Animals | Humans | Zoonoses - epidemiology | Bacterial Infections - epidemiology | Dogs | Public Health - legislation & jurisprudence | Bacterial Infections - transmission | Zoonoses - transmission | Pets | Drug resistance in microorganisms | Bacteria | Psittacosis | Disease transmission | Zoonoses | Index Medicus | CVI Infection Biology | CVI Infectiebiologie | Infectiebiologie | Infection Biology
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9. Full Text Changes in the population of methicillin-resistant Staphylococcus pseudintermedius and dissemination of antimicrobial-resistant phenotypes in the Netherlands
by Duim, Birgitta and Verstappen, Koen M and Broens, Els M and Laarhoven, Laura M and Van Duijkeren, Engeline and Hordijk, Joost and De Heus, Phebe and Spaninks, Mirlin and Timmerman, Arjen J and Wagenaar, Jaap A
Journal of clinical microbiology, ISSN 0095-1137, 02/2016, Volume 54, Issue 2, pp. 283 - 288
Life Sciences & Biomedicine | Microbiology | Science & Technology | Dog Diseases - epidemiology | Staphylococcus - classification | Humans | Netherlands - epidemiology | Dog Diseases - microbiology | Genotype | Staphylococcus - drug effects | Phylogeny | Multilocus Sequence Typing | Staphylococcal Infections - veterinary | Microbial Sensitivity Tests | Phenotype | Animals | Alleles | Dogs | Retrospective Studies | Methicillin Resistance | Staphylococcus - genetics | Index Medicus | Clinical Veterinary Microbiology | CVI Infection Biology | CVI Infectiebiologie | Infectiebiologie | Infection Biology
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10. Full Text Zoonotic Transmission of mcr-1 Colistin Resistance Gene from Small-Scale Poultry Farms, Vietnam
by Trung, Nguyen Vinh and Matamoros, Sébastien and Carrique-Mas, Juan J and Nghia, Nguyen Huu and Nhung, Nguyen Thi and Chieu, Tran Thi Bich and Mai, Ho Huynh and van Rooijen, Willemien and Campbell, James and Wagenaar, Jaap A and Hardon, Anita and Mai, Nguyen Thi Nhu and Hieu, Thai Quoc and Thwaites, Guy and de Jong, Menno D and Schultsz, Constance and Hoa, Ngo Thi
Emerging infectious diseases, ISSN 1080-6040, 2017, Volume 23, Issue 3, pp. 529 - 532
Infectious Diseases | Immunology | Life Sciences & Biomedicine | Science & Technology | Escherichia coli - drug effects | Humans | Risk Factors | Escherichia coli Infections - microbiology | Phylogeny | Zoonoses | Microbial Sensitivity Tests | Escherichia coli Infections - epidemiology | Feces - microbiology | Vietnam | Animals | Colistin - pharmacology | Escherichia coli Proteins | Escherichia coli - genetics | Chickens | Poultry Diseases - microbiology | Aging | Escherichia coli Infections - veterinary | Drug Resistance, Bacterial - genetics | Gene Expression Regulation, Bacterial | Poultry Diseases - epidemiology | Drug resistance in microorganisms | Medical research | Colistin | Patient outcomes | Distribution | Medicine, Experimental | Genetic aspects | Poultry industry | Genes | Genetic research | Bacteria | Agriculture | Livestock farms | Antibacterial agents | Index Medicus | chicken | Zoonotic Transmission of | fecal colonization | bacteria | food production | Dispatch | zoonoses | small-scale farm | Colistin Resistance Gene from Small-Scale Poultry Farms, Vietnam | transmission | antibiotic resistance | antimicrobial resistance | backyard farm | poultry farms | colistin resistance | E. coli | colistin | CVI Infection Biology | CVI Infectiebiologie | Infectiebiologie | Infection Biology
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