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protein (106) 106
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1. Full Text Quantum coherence and its interplay with protein environments in photosynthetic electronic energy transfer
by Ishizaki, Akihito and Calhoun, Tessa R and Schlau-Cohen, Gabriela S and Fleming, Graham R
Physical Chemistry Chemical Physics, ISSN 1463-9076, 7/2010, Volume 12, Issue 27, pp. 7319 - 7337
Recent experiments suggest that electronic energy transfer in photosynthetic pigment-protein complexes involves long-lived quantum coherence among electronic... 
LIGHT-HARVESTING-COMPLEX | ANGSTROM RESOLUTION | INTEGRAL APPROACH | ROOM-TEMPERATURE | SPECTRAL DENSITY | VIBRATIONAL-RELAXATION | GREEN SULFUR BACTERIA | EXCITATION TRANSFER | FMO ANTENNA COMPLEXES | BROWNIAN OSCILLATOR | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CHEMISTRY, PHYSICAL | Photosynthesis - radiation effects | Markov Chains | Electron Transport - radiation effects | Energy Transfer - radiation effects | Light-Harvesting Protein Complexes - metabolism | Models, Molecular | Quantum Theory | Energy Transfer - physiology | Proteins - metabolism | Proteins - radiation effects | Light | Photosynthesis - physiology | Electron Transport - physiology | Proteins - chemistry | Electrons | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Index Medicus
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2. Full Text Mechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5 resolution
by Kühlbrandt, Werner and Standfuss, Jörg and Lamborghini, Matteo and Terwisscha van Scheltinga, Anke C
The EMBO Journal, ISSN 0261-4189, 03/2005, Volume 24, Issue 5, pp. 919 - 928
The plant light‐harvesting complex of photosystem II (LHC‐II) collects and transmits solar energy for photosynthesis in chloroplast membranes and has essential... 
crystal structure | energy transfer | membrane protein | light harvesting | photosynthesis | Membrane protein | Photosynthesis | Light harvesting | Energy transfer | Crystal structure | Light-Harvesting Protein Complexes - metabolism | Models, Molecular | Crystallography, X-Ray | Lipid Metabolism | Photobiology | Static Electricity | Peas - radiation effects | Chlorophyll - chemistry | Carotenoids - radiation effects | Lipids - chemistry | Models, Biological | Plant Proteins - chemistry | Carotenoids - metabolism | Protein Structure, Quaternary | Plant Proteins - radiation effects | Plant Proteins - metabolism | Carotenoids - chemistry | Binding Sites | Peas - chemistry | Peas - metabolism | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Photochemistry | Index Medicus
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3. Full Text Molecular basis of photoprotection and control of photosynthetic light-harvesting
by Pascal, A.A and Liu, ZF and Broess, K and van Oort, B and van Amerongen, H and Wang, C and Horton, P and Robert, B and Chang, WR and Ruban, A
Nature, ISSN 0028-0836, 2005, Volume 436, Issue 7047, pp. 134 - 137
In order to maximize their use of light energy in photosynthesis, plants have molecules that act as light-harvesting antennae, which collect light quanta and... 
TIME-RESOLVED FLUORESCENCE | EXCITATION-ENERGY | XANTHOPHYLLS | MECHANISM | MULTIDISCIPLINARY SCIENCES | LHCII | MEMBRANES | CHLOROPHYLL-PROTEIN COMPLEX | ZEAXANTHIN | GREEN PLANTS | BINDING | Photosynthesis - radiation effects | Protein Structure, Tertiary | Crystallization | Light-Harvesting Protein Complexes - metabolism | Fluorescence | Models, Molecular | Crystallography, X-Ray | Structure-Activity Relationship | Chlorophyll - metabolism | Photosystem II Protein Complex - metabolism | Pigments, Biological - metabolism | Plants - radiation effects | Plants - metabolism | Photosystem II Protein Complex - radiation effects | Light | Photosystem II Protein Complex - chemistry | Photosynthesis - physiology | Spectrum Analysis, Raman | Plants - chemistry | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Pigments, Biological - chemistry | Chlorophyll | Molecular biology | Photosynthesis | Spectrum analysis | Botany | Index Medicus | membranes | green plants | lhcii | xanthophylls | time-resolved fluorescence | excitation-energy | binding | chlorophyll-protein complex | mechanism | zeaxanthin
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4. Full Text Physical origins and models of energy transfer in photosynthetic light-harvesting
by Novoderezhkin, V.I and van Grondelle, R
Physical Chemistry Chemical Physics - PCCP, ISSN 1463-9076, 2010, Volume 12, Issue 27, pp. 7352 - 7365
We perform a quantitative comparison of different energy transfer theories, i.e. modified Redfield, standard and generalized Förster theories, as well as... 
GREEN SULFUR BACTERIA | PRIMARY CHARGE SEPARATION | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | II REACTION CENTERS | A/B PROTEIN COMPLEX | PHOTOSYSTEM-II | CHEMISTRY, PHYSICAL | REDFIELD THEORY APPROACH | SINGLE LH2 COMPLEXES | ULTRAFAST EXCITON MOTION | TRANSIENT ABSORPTION-SPECTROSCOPY | RESOLUTION FLUORESCENCE SPECTROSCOPY | Photosynthesis - radiation effects | Cryptophyta - chemistry | Phycoerythrin - chemistry | Energy Transfer - radiation effects | Light-Harvesting Protein Complexes - metabolism | Photosystem II Protein Complex - metabolism | Plants - metabolism | Energy Transfer - physiology | Models, Biological | Light | Photosystem II Protein Complex - chemistry | Photosynthesis - physiology | Cryptophyta - metabolism | Phycoerythrin - metabolism | Plants - chemistry | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Index Medicus
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5. Full Text Zeaxanthin Binds to Light-Harvesting Complex Stress-Related Protein to Enhance Nonphotochemical Quenching in Physcomitrella patens
by Alberta Pinnola and Luca Dall'Osto and Caterina Gerotto and Tomas Morosinotto and Roberto Bassi and Alessandro Alboresi
The Plant Cell, ISSN 1040-4651, 9/2013, Volume 25, Issue 9, pp. 3519 - 3534
Nonphotochemical quenching (NPQ) dissipates excess energy to protect the photosynthetic apparatus from excess light. The moss Physcomitrella patens exhibits... 
Xanthophylls | Carotenoids | Gels | RESEARCH ARTICLES | Fluorescence | Pigments | Thylakoids | Photosystem II | Plants | Chlorophylls | Plant cells | PHOTOPROTECTIVE ENERGY-DISSIPATION | CHLOROPHYLL FLUORESCENCE | PHOTOOXIDATIVE STRESS | BIOCHEMISTRY & MOLECULAR BIOLOGY | PLANT SCIENCES | CELL BIOLOGY | ARABIDOPSIS LEAVES | CHLAMYDOMONAS-REINHARDTII | PHOTOSYSTEM-II | ANTENNA PROTEIN | DEFICIENT MUTANT | XANTHOPHYLL-CYCLE | ELECTRON-TRANSPORT | Adaptation, Physiological | Bryopsida - physiology | Light-Harvesting Protein Complexes - metabolism | Biosynthetic Pathways | Chlorophyll - metabolism | Bryopsida - radiation effects | Gene Knockout Techniques | Thylakoids - metabolism | Photosystem II Protein Complex - metabolism | Bryopsida - genetics | Zeaxanthins - metabolism | Photosystem II Protein Complex - radiation effects | Light | Xanthophylls - metabolism | Light-Harvesting Protein Complexes - radiation effects | Physiological aspects | Research | Photosynthesis | Bryophytes | Binding sites (Biochemistry) | Index Medicus
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6. Full Text Connectivity among Photosystem II centers in phytoplankters: Patterns and responses
by Xu, Kui and Grant-Burt, Jessica L and Donaher, Natalie and Campbell, Douglas A
BBA - Bioenergetics, ISSN 0005-2728, 06/2017, Volume 1858, Issue 6, pp. 459 - 474
Fast Repetition and Relaxation chlorophyll fluorescence induction is used to estimate the effective absorption cross section of PSII (σ ), to analyze... 
Prochlorococcus | Thalassiosira pseudonana | Fast Repetition and Relaxation chlorophyll fluorescence induction | Ostreococcus | Synechococcus | Phytoplankton | Light acclimation | Photosynthesis | LIGHT-HARVESTING COMPLEXES | CHLOROPHYLL FLUORESCENCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | STATE | PHOTOPROTECTION | EXCITATION-ENERGY | BIOPHYSICS | IRON LIMITATION | ENERGY-TRANSFER | THYLAKOID MEMBRANE | ELECTRON-TRANSPORT | Darkness | Electron Transport | Species Specificity | Light-Harvesting Protein Complexes - metabolism | Fluorescence | Chlorophyta - metabolism | Diatoms - metabolism | Chlorophyta - radiation effects | Diatoms - radiation effects | Prochlorococcus - metabolism | Light | Phytoplankton - radiation effects | Phytoplankton - metabolism | Light-Harvesting Protein Complexes - radiation effects | Photochemistry | Algal Proteins - radiation effects | Bacterial Proteins - radiation effects | Absorption, Radiation | Prochlorococcus - radiation effects | Photosystem II Protein Complex - metabolism | Synechococcus - radiation effects | Bacterial Proteins - metabolism | Kinetics | Algal Proteins - metabolism | Synechococcus - metabolism | Chlorophyll | Analysis | Phytochemistry | Index Medicus
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7. Full Text Towards an ab initio description of the optical spectra of light-harvesting antennae: Application to the CP29 complex of photosystem II
by Jurinovich, Sandro and Viani, Lucas and Prandi, Ingrid G and Renger, Thomas and Mennucci, Benedetta
Physical Chemistry Chemical Physics, ISSN 1463-9076, 06/2015, Volume 17, Issue 22, pp. 14405 - 14416
Light-harvesting pigment-protein complexes (PPC) represent the fundamental units through which the photosynthetic organisms absorb sunlight and funnel the... 
CHLOROPHYLL-A | PIGMENT-PROTEIN COMPLEXES | LHCII COMPLEX | FLUORESCENCE | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | ARCHITECTURE | DYNAMICS | CHEMISTRY, PHYSICAL | FORCE-FIELD | MODEL | BINDING | EXCITATION-ENERGY TRANSFER | Models, Chemical | Energy Transfer - radiation effects | Light-Harvesting Protein Complexes - ultrastructure | Radiation Dosage | Molecular Dynamics Simulation | Photosystem II Protein Complex - ultrastructure | Quantum Theory | Photosystem II Protein Complex - radiation effects | Protein Conformation - radiation effects | Spectrum Analysis - methods | Computer Simulation | Light | Photosystem II Protein Complex - chemistry | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Index Medicus
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8. Full Text The Chloroplast Calcium Sensor CAS Is Required for Photoacclimation in Chlamydomonas reinhardtii
by Dimitris Petroutsos and Andreas Busch and Ingrid Janßen and Kerstin Trompelt and Sonja Verena Bergner and Stefan Weinl and Michael Holtkamp and Uwe Karst and Jörg Kudla and Michael Hippler
The Plant Cell, ISSN 1040-4651, 8/2011, Volume 23, Issue 8, pp. 2950 - 2963
The plant-specific calcium binding protein CAS (calcium sensor) has been localized in chloroplast thylakoid membranes of vascular plants and green algae. To... 
Phenotypes | Cell growth | Calcium | Chloroplasts | Cell lines | Thylakoids | Gene expression regulation | Plants | Chlorophylls | Plant cells | ARABIDOPSIS-THALIANA | BIOCHEMISTRY & MOLECULAR BIOLOGY | MEASURING DETECTION LIMITS | CYTOSOLIC CA2+ TRANSIENTS | BIOENERGETIC PATHWAYS | PLASMA EMISSION-SPECTROMETRY | PLANT SCIENCES | CELL BIOLOGY | ARTIFICIAL MICRORNAS | PHOTOSYSTEM-II | THYLAKOID MEMBRANE | CALMODULIN-BINDING | FLAGELLAR EXCISION | Chlorophyll - radiation effects | Sequence Deletion | Light-Harvesting Protein Complexes - genetics | Calcium - metabolism | Light-Harvesting Protein Complexes - metabolism | Chlamydomonas reinhardtii - genetics | Chlamydomonas reinhardtii - physiology | Light | Chloroplasts - radiation effects | Photosynthesis - physiology | Plant Proteins - metabolism | Signal Transduction - radiation effects | Photosynthesis - radiation effects | Gene Expression Regulation, Plant - radiation effects | Calcium - pharmacology | Wasp Venoms - pharmacology | Enzyme Inhibitors - pharmacology | Adaptation, Physiological - radiation effects | Chlorophyll - metabolism | Sulfonamides - pharmacology | Thylakoids - radiation effects | Chloroplasts - metabolism | Thylakoids - metabolism | Peptides - pharmacology | Photosystem II Protein Complex - metabolism | Down-Regulation - physiology | Plant Proteins - genetics | Phenotype | Photosystem II Protein Complex - radiation effects | Gene Expression Regulation, Plant - physiology | Proteomics | Signal Transduction - physiology | Chlamydomonas reinhardtii - radiation effects | Calmodulin - antagonists & inhibitors | Calcium, Dietary | Photorespiration | Physiological aspects | Acclimatization | Chlamydomonas | Protein binding | Index Medicus | s
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9. Full Text The xanthophyll cycle pigments, violaxanthin and zeaxanthin, modulate molecular organization of the photosynthetic antenna complex LHCII
by Janik, Ewa and Bednarska, Joanna and Zubik, Monika and Sowinski, Karol and Luchowski, Rafal and Grudzinski, Wojciech and Matosiuk, Dariusz and Gruszecki, Wieslaw I
Archives of Biochemistry and Biophysics, ISSN 0003-9861, 02/2016, Volume 592, pp. 1 - 9
The effect of violaxanthin and zeaxanthin, two main carotenoids of the xanthophyll cycle, on molecular organization of LHCII, the principal photosynthetic... 
Chlorophyll fluorescence | Zeaxanthin | Photosynthesis | Xanthophyll cycle | LHCII | Violaxanthin | BIOCHEMISTRY & MOLECULAR BIOLOGY | STATE | LIPID-MEMBRANES | THYLAKOID MEMBRANES | LIGHT-HARVESTING COMPLEX | BIOPHYSICS | INDUCED ISOMERIZATION | PHOTOSYSTEM-II | PLANTS | ENERGY-DISSIPATION | AGGREGATION | Xanthophylls - chemistry | Zeaxanthins - chemistry | Binding Sites - radiation effects | Radiation Dosage | Photosystem II Protein Complex - radiation effects | Protein Conformation - radiation effects | Light | Photosystem II Protein Complex - chemistry | Protein Binding - radiation effects | Zeaxanthins - radiation effects | Molecular Docking Simulation | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Xanthophylls - radiation effects | Oligomers | Chlorophyll | Carotenoids | Analysis | Fluorescence | Antennas (Electronics) | Index Medicus
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10. Full Text Electron transfer between carotenoid and chlorophyll contributes to quenching in the LHCSR1 protein from Physcomitrella patens
by Pinnola, Alberta and Staleva-Musto, Hristina and Capaldi, Stefano and Ballottari, Matteo and Bassi, Roberto and Polívka, Tomáš
BBA - Bioenergetics, ISSN 0005-2728, 12/2016, Volume 1857, Issue 12, pp. 1870 - 1878
Plants harvest photons for photosynthesis using light-harvesting complexes (LHCs)-an array of chlorophyll proteins that can reversibly switch from harvesting... 
Femtosecond spectroscopy | Carotenoids | Non-photochemical quenching | LHCSR | Photosynthesis - radiation effects | Electron Transport | Light-Harvesting Protein Complexes - genetics | Plants, Genetically Modified - radiation effects | Plants, Genetically Modified - genetics | Tobacco - metabolism | Light-Harvesting Protein Complexes - metabolism | Chlorophyll - metabolism | Bryopsida - radiation effects | Tobacco - radiation effects | Bryopsida - metabolism | Bryopsida - genetics | Zeaxanthins - metabolism | Plants, Genetically Modified - metabolism | Photosynthesis - genetics | Models, Biological | Tobacco - genetics | Xanthophylls - metabolism | Protein Binding | Energy Transfer | Kinetics | Spectrum Analysis | Hydrogen-Ion Concentration | Light-Harvesting Protein Complexes - radiation effects | Proteins | Chlorophyll | Photosynthesis | Electron transport
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11. Full Text PGR5 Is Involved in Cyclic Electron Flow around Photosystem I and Is Essential for Photoprotection in Arabidopsis
by Munekage, Yuri and Hojo, Masaya and Meurer, Jörg and Endo, Tsuyoshi and Tasaka, Masao and Shikanai, Toshiharu
Cell, ISSN 0092-8674, 2002, Volume 110, Issue 3, pp. 361 - 371
During photosynthesis, plants must control the utilization of light energy in order to avoid photoinhibition. We isolated an Arabidopsis mutant, pgr5 (proton... 
CHLOROPHYLL-FLUORESCENCE | PHOTOACOUSTIC MEASUREMENTS | TRANSPORT | BIOCHEMISTRY & MOLECULAR BIOLOGY | NAD(P)H DEHYDROGENASE | LEAVES | CHLOROPLASTS | ENERGY-STORAGE | NDHB GENE | NADH-DEHYDROGENASE | TOBACCO | CELL BIOLOGY | Chlorophyll - radiation effects | Photosynthetic Reaction Center Complex Proteins - metabolism | Photosystem II Protein Complex | Electron Transport - radiation effects | Electron Transport - genetics | Oxidation-Reduction - radiation effects | Molecular Sequence Data | Cell Respiration - radiation effects | Amino Acid Sequence - genetics | Chlorophyll - genetics | Oxygen - metabolism | Photic Stimulation - adverse effects | Cell Respiration - genetics | Photosynthesis - genetics | Photosynthetic Reaction Center Complex Proteins - genetics | Photosynthetic Reaction Center Complex Proteins - radiation effects | Thylakoids - genetics | Light-Harvesting Protein Complexes | NADP - metabolism | Photosynthesis - radiation effects | Arabidopsis Proteins - genetics | Base Sequence - genetics | Gene Expression Regulation, Plant - radiation effects | Carbon Dioxide - metabolism | NADP - radiation effects | Mutation - radiation effects | Arabidopsis - cytology | Light - adverse effects | Chlorophyll - metabolism | Mutation - genetics | Thylakoids - radiation effects | Thylakoids - metabolism | Arabidopsis - metabolism | Arabidopsis Proteins - radiation effects | Macromolecular Substances | Photosystem I Protein Complex | Arabidopsis - genetics | Arabidopsis Proteins - isolation & purification | Gene Expression Regulation, Plant - physiology | NADP - genetics | Photosynthetic Reaction Center Complex Proteins - isolation & purification | Cell research | Gene mutations | Arabidopsis | Analysis | Photosynthesis research | Physiological aspects | Genetic aspects | Hydrogen-ion concentration | Cells | Index Medicus
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12. Full Text Coherence and decoherence in biological systems: principles of noise-assisted transport and the origin of long-lived coherences
by A. W. Chin and S. F. Huelga and M. B. Plenio
Philosophical Transactions: Mathematical, Physical and Engineering Sciences, ISSN 1364-503X, 8/2012, Volume 370, Issue 1972, pp. 3638 - 3657
The quantum dynamics of transport networks in the presence of noisy environments has recently received renewed attention with the discovery of long-lived... 
Excitons | Energy levels | Electrical couplings | Transportation noise | Spectral energy distribution | Phonons | Pigments | Quantum decoherence | Energy transfer | Antennas | Biology | Long-lived coherence | Noise-assisted transport | Quantum physics | biology | PROTEIN | noise-assisted transport | MULTIDISCIPLINARY SCIENCES | MATTHEWS-OLSON COMPLEX | long-lived coherence | PHYSIOLOGICAL TEMPERATURE | DYNAMICS | ENERGY-TRANSFER | PROSTHECOCHLORIS-AESTUARII | QUANTUM COHERENCE | ELECTRONIC SPECTROSCOPY | APPARATUS | quantum physics | PURPLE BACTERIA | Photosynthesis - radiation effects | Light-Harvesting Protein Complexes - physiology | Quantum Theory | Energy Transfer - physiology | Electron Transport - radiation effects | Models, Chemical | Energy Transfer - radiation effects | Models, Biological | Light | Photosynthesis - physiology | Light-Harvesting Protein Complexes - chemistry | Light-Harvesting Protein Complexes - radiation effects | Index Medicus
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