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1. Full Text The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
by Nuno L. Barbosa-Morais and Manuel Irimia and Qun Pan and Hui Y. Xiong and Serge Gueroussov and Leo J. Lee and Valentina Slobodeniuc and Claudia Kutter and Stephen Watt and Recep Çolak and TaeHyung Kim and Christine M. Misquitta-Ali and Michael D. Wilson and Philip M. Kim and Duncan T. Odom and Brendan J. Frey and Benjamin J. Blencowe
Science, ISSN 0036-8075, 12/2012, Volume 338, Issue 6114, pp. 1587 - 1593
How species with similar repertoires of protein-coding genes differ so markedly at the phenotypic level is poorly understood. By comparing organ transcriptomes... 
Statistical significance | Vertebrates | Alternative splicing | Splicing | Reverse transcriptase polymerase chain reaction | Exons | Proportions | RESEARCH ARTICLES | Humans | Chickens | Evolution | EXON | EVENTS | GENOMES | MULTIDISCIPLINARY SCIENCES | MOUSE | GENE-EXPRESSION | BIRTH | Mice - genetics | RNA Splice Sites | Alternative Splicing | Species Specificity | Vertebrates - genetics | Introns | Xenopus - genetics | Transcriptome | Lizards - genetics | Regulatory Sequences, Ribonucleic Acid | Platypus - genetics | Biological Evolution | Opossums - genetics | Phenotype | Primates - genetics | Animals | Mice, Inbred C57BL - genetics | Chickens - genetics | Evolution, Molecular | Genetic engineering | Genetic aspects | Research | Genotype & phenotype | Evolutionary biology | RNA-protein interactions | Gene expression
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2. Full Text Genetic tests for ecological and allopatric speciation in anoles on an Island archipelago
by Thorpe, Roger S and Surget-Groba, Yann and Johansson, Helena
PLoS Genetics, ISSN 1553-7390, 04/2010, Volume 6, Issue 4, p. e1000929
From Darwin's study of the Galapagos and Wallace's study of Indonesia, islands have played an important role in evolutionary investigations, and radiations... 
EVOLUTIONARY | CARIBBEAN LIZARD | DIVERSIFICATION | LESSER-ANTILLES | NATURAL-SELECTION | ADAPTATION | GENETICS & HEREDITY | MICROSATELLITE MARKERS | DIFFERENTIATION | DIVERGENT SELECTION | ROQUET SERIES | Genetic Variation | Geography | Genetics, Population | Animals | DNA, Mitochondrial - genetics | Species Specificity | Ecosystem | Genetic Speciation | Selection, Genetic | Lizards - genetics | Phylogeny | Evolution, Molecular | Physiological aspects | Anolis | Usage | Genetic aspects | Research | Genetic screening | Evolution | Fish | Mitochondrial DNA | Geology | Habitats
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3. Full Text Quantifying Ecological, Morphological, and Genetic Variation to Delimit Species in the Coast Horned Lizard Species Complex (Phrynosoma)
by Adam D. Leaché and Michelle S. Koo and Carol L. Spencer and Theodore J. Papenfuss and Robert N. Fisher and Jimmy A. McGuire and David B. Wake
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 7/2009, Volume 106, Issue 30, pp. 12418 - 12423
Lineage separation and divergence form a temporally extended process whereby populations may diverge genetically, morphologically, or ecologically, and these... 
Biological taxonomies | Population ecology | Horned lizards | Ecological genetics | Genealogy | Phylogenetics | Evolution | Genetic loci | Mitochondrial DNA | Species | Geometric morphometrics | Niche modeling | Phylogeography | Speciation | EVOLUTIONARY | MIXED MODELS | MULTIDISCIPLINARY SCIENCES | NETWORKS | evolution | CORONATUM | PHYLOGENETIC INFERENCE | phylogeography | speciation | DISTRIBUTIONS | niche modeling | CALIFORNIA | TREES | CONSERVATISM | geometric morphometrics | Geography | Brain-Derived Neurotrophic Factor - genetics | Lizards - classification | Multivariate Analysis | Species Specificity | Lizards - anatomy & histology | Lizards - genetics | Molecular Sequence Data | Ecology | California | Phylogeny | Sequence Analysis, DNA | Homeodomain Proteins - genetics | Genetic Variation | Animals | DNA, Mitochondrial - genetics | Cell Nucleus - genetics | Bayes Theorem | Animal Migration | Models, Genetic | DNA, Mitochondrial - chemistry | Morphological variation | Genetic aspects | Research | Horned toads | Varieties | Coasts | Conservation | Genetic diversity | Population genetics | genealogy | Brain-derived neurotrophic factor | RAG1 protein | Skull | Horns | Differentiation | Niches | Biological Sciences
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4. Full Text Divergence in coloration and ecological speciation in the Anolis marmoratus species complex
by Muñoz, Martha M and Crawford, Nicholas G and McGreevy, Thomas J and Messana, Nicholas J and Tarvin, Rebecca D and Revell, Liam J and Zandvliet, Rosanne M and Hopwood, Juanita M and Mock, Elbert and Schneider, André L and Schneider, Christopher J
Molecular Ecology, ISSN 0962-1083, 05/2013, Volume 22, Issue 10, pp. 2668 - 2682
Adaptive divergence in coloration is expected to produce reproductive isolation in species that use colourful signals in mate choice and species recognition.... 
population genetics – empirical | adaptation | ecological genetics | reptiles | population genetics - empirical | DEWLAP COLOR | population genetics empirical | ADAPTIVE RADIATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETIC DIFFERENTIATION | GUPPIES POECILIA-RETICULATA | RAIN-FOREST REFUGIA | CARIBBEAN ANOLES | SEXUAL SELECTION | EVOLUTIONARY BIOLOGY | EVOLUTION | NATURAL-SELECTION | WHITE SANDS | ECOLOGY | Gene Flow - genetics | Genetics, Population | Species Specificity | Adaptation, Biological - genetics | Pigmentation - physiology | Selection, Genetic | Lizards - genetics | Molecular Sequence Data | Male | Sequence Analysis, DNA | Microsatellite Repeats - genetics | Biological Evolution | Genetic Variation | Lizards - physiology | Animals | Base Sequence | Ecosystem | Genetic Speciation | Guadeloupe | Environmental aspects | Population genetics | Genomics | Genetic diversity | Animal populations | Evolutionary biology | Reptiles & amphibians
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5. Full Text The genome of the green anole lizard and a comparative analysis with birds and mammals
by Alföldi, Jessica and Di Palma, Federica and Grabherr, Manfred and Williams, Christina and Kong, Lesheng and Mauceli, Evan and Russell, Pamela and Lowe, Craig B and Glor, Richard E and Jaffe, Jacob D and Ray, David A and Boissinot, Stephane and Shedlock, Andrew M and Botka, Christopher and Castoe, Todd A and Colbourne, John K and Fujita, Matthew K and Moreno, Ricardo Godinez and Ten Hallers, Boudewijn F and Haussler, David and Heger, Andreas and Heiman, David and Janes, Daniel E and Johnson, Jeremy and De Jong, Pieter J and Koriabine, Maxim Y and Lara, Marcia and Novick, Peter A and Organ, Chris L and Peach, Sally E and Poe, Steven and Pollock, David D and De Queiroz, Kevin and Sanger, Thomas and Searle, Steve and Smith, Jeremy D and Smith, Zachary and Swofford, Ross and Turner-Maier, Jason and Wade, Juli and Young, Sarah and Zadissa, Amonida and Edwards, Scott V and Glenn, Travis C and Schneider, Christopher J and Losos, Jonathan B and Lander, Eric S and Breen, Matthew and Ponting, Chris P and Lindblad-Toh, Kerstin and Medicinska fakulteten and Science for Life Laboratory, SciLifeLab and Medicinska och farmaceutiska vetenskapsområdet and Institutionen för medicinsk biokemi och mikrobiologi and Uppsala universitet
Nature, ISSN 0028-0836, 09/2011, Volume 477, Issue 7366, pp. 587 - 591
The evolution of the amniotic egg was one of the great evolutionary innovations in the history of life, freeing vertebrates from an obligatory connection to... 
MULTIDISCIPLINARY SCIENCES | EVOLUTION | CHICKEN | Mammals - genetics | Synteny - genetics | Genomics | Humans | Genome - genetics | Lizards - genetics | Molecular Sequence Data | Phylogeny | Animals | GC Rich Sequence - genetics | Chickens - genetics | Birds - genetics | X Chromosome - genetics | Evolution, Molecular | Birds | Evolution | Genomes | Artificial chromosomes | Reptiles & amphibians | Evolution & development | Mass spectrometry | Biological Sciences | Evolutionsbiologi | Naturvetenskap | Natural Sciences | Evolutionary Biology | Biologiska vetenskaper
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6. Full Text Evolutionary analysis of the female-specific avian W chromosome
by Smeds, Linnéa and Warmuth, Vera and Bolivar, Paulina and Uebbing, Severin and Burri, Reto and Suh, Alexander and Nater, Alexander and Bureš, Stanislav and Garamszegi, Laszlo Z and Hogner, Silje and Moreno, Juan and Qvarnström, Anna and Ruzic, Milan and Sæther, Stein-Are and Sætre, Glenn-Peter and Török, Janos and Ellegren, Hans and Teknisk-naturvetenskapliga vetenskapsområdet and Evolutionsbiologi and Biologiska sektionen and Uppsala universitet and Zooekologi and Institutionen för ekologi och genetik
Nature Communications, ISSN 2041-1723, 06/2015, Volume 6, Issue 1, p. 7330
The typically repetitive nature of the sex-limited chromosome means that it is often excluded from or poorly covered in genome assemblies, hindering studies of... 
DOSAGE COMPENSATION | PHYLOGENETIC ANALYSIS | MULTIDISCIPLINARY SCIENCES | CHICKEN | HUMAN Y-CHROMOSOME | GENE CONVERSION | SEX-CHROMOSOMES | PURIFYING SELECTION | MULTIPLE SEQUENCE ALIGNMENT | GENOME | REVEALS | Struthioniformes - genetics | Songbirds - genetics | Lizards - genetics | Finches - genetics | Reptiles - genetics | Phylogeny | Turtles - genetics | Animals | DNA, Mitochondrial - genetics | Sex Chromosomes - genetics | Chickens - genetics | Female | Birds - genetics | Evolution, Molecular | Biological Sciences | Naturvetenskap | Natural Sciences | Biologiska vetenskaper
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7. Full Text Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates
by Van Oers, K and Santure, A.W and de Cauwer, I and Van Bers, N.E.M and Crooijmans, R.P.M.A and Sheldon, B.C and Visser, M.E and Slate, J and Groenen, M.A.M
Heredity, ISSN 0018-067X, 2014, Volume 112, Issue 3, pp. 307 - 316
Linking variation in quantitative traits to variation in the genome is an important, but challenging task in the study of life-history evolution. Linkage maps... 
heterochiasmy | passerine | population comparison | chromosomal rearrangements | linkage map | SYNTENY CONSERVATION | WILD BIRD POPULATION | EVOLUTIONARY BIOLOGY | ZEBRA FINCH | PARUS-MAJOR | TURKEY GENOME | EVOLUTION | CHICKEN | GENETICS & HEREDITY | FICEDULA-ALBICOLLIS | ECOLOGY | PERSONALITY-TRAITS | Genetics, Population | Lizards - genetics | Finches - genetics | Male | United Kingdom | Chromosome Mapping | Netherlands | Animals | Recombination, Genetic | Passeriformes - genetics | Chickens - genetics | Female | Polymorphism, Single Nucleotide | Genome | Genetic Linkage | Linkage (Genetics) | Research | Crossing over (Genetics) | Population genetics | Birds | Chromosomes | Genomics | Genetic linkage | Life Sciences | Populations and Evolution | Genetics | Original | parus-major | synteny conservation | chicken | zebra finch | wild bird population | personality-traits | evolution | turkey genome | ficedula-albicollis
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8. Full Text The role of ecological factors in determining phylogeographic and population genetic structure of two sympatric island skinks (Plestiodon kishinouyei and P. stimpsonii)
by Kurita, Kazuki and Toda, Mamoru
Genetica, ISSN 0016-6707, 4/2017, Volume 145, Issue 2, pp. 223 - 234
We conducted comparative phylogeographic and population genetic analyses of Plestiodon kishinouyei and P. stimpsonii, two sympatric skinks endemic to islands... 
Life Sciences | Human Genetics | Scincidae | Filter bridge | Reptile | Microbial Genetics and Genomics | Phylogeography | Ryukyu Archipelago | Evolutionary Biology | Population genetics | Animal Genetics and Genomics | Plant Genetics & Genomics | ALLELES | SEQUENCES | JAPONICUS REPTILIA | COMPUTER-PROGRAM | BAYESIAN PHYLOGENETIC INFERENCE | DISPERSAL | GENETICS & HEREDITY | STATISTICAL TESTS | DIFFERENTIATION | DIVERGENCE | Geography | Haplotypes | Genetics, Population | Lizards - classification | Species Specificity | Lizards - genetics | Sympatry | Genotype | Ecology | Phylogeny | Sequence Analysis, DNA | Microsatellite Repeats - genetics | Genetic Variation | Animals | DNA, Mitochondrial - genetics | Ecosystem | Genetic Speciation | Islands | DNA, Mitochondrial - chemistry | Zoology | Analysis | Genetic research | Mitochondrial DNA | Genetic polymorphisms
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9. Full Text Karyotype evolution in monitor lizards: cross-species chromosome mapping of cDNA reveals highly conserved synteny and gene order in the Toxicofera clade
by Srikulnath, Kornsorn and Uno, Yoshinobu and Nishida, Chizuko and Matsuda, Yoichi
Chromosome Research, ISSN 0967-3849, 12/2013, Volume 21, Issue 8, pp. 805 - 819
The water monitor lizard (Varanus salvator macromaculatus (VSA), Platynota) has a chromosome number of 2n = 40: its karyotype consists of 16 macrochromosomes... 
Life Sciences | Human Genetics | Cytogenetic map | Monitor lizard | Squamata | Synteny and gene order | Toxicofera | Karyotype evolution | Cell Biology | Animal Genetics and Genomics | Plant Genetics & Genomics | AGAMIDAE | PHYLOGENY | BIOCHEMISTRY & MOLECULAR BIOLOGY | AMPHISBAENIANS | GENOME | SEQUENCE | GENETICS & HEREDITY | DIFFERENTIATION | BIRDS | SNAKES | MAMMALS | Lizards - classification | Synteny - genetics | RNA, Ribosomal, 18S - genetics | DNA, Complementary - genetics | Lizards - genetics | In Situ Hybridization, Fluorescence | Male | Chromosome Mapping | Centromere - metabolism | RNA, Ribosomal, 28S - isolation & purification | Snakes - genetics | Animals | Centromere - genetics | Chromosomes - genetics | Chickens | Karyotyping | Cloning, Molecular | Conservation of Natural Resources | RNA, Ribosomal, 18S - isolation & purification | Snakes - classification | Gene Order | RNA, Ribosomal, 28S - genetics | Karyotype | Evolution, Molecular | Animal genetics | Genetic research | Cytogenetics | Lizards | Genes | Reptiles & amphibians | Chromosomes | Genomics
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10. Full Text Genesis of the vertebrate FoxP subfamily member genes occurred during two ancestral whole genome duplication events
by Song, Xiaowei and Tang, Yezhong and Wang, Yajun
Gene, ISSN 0378-1119, 08/2016, Volume 588, Issue 2, pp. 156 - 162
The vertebrate subfamily genes play important roles in the construction of essential functional modules involved in physiological and developmental processes.... 
Phylogenetic analysis | Evolution | Gene duplication | Whole genome duplication | Protein-protein interaction | SONGBIRD | METABOTROPIC GLUTAMATE RECEPTORS | SPEECH | REGULATOR | GENETICS & HEREDITY | MICROPHTHALMIA | GENERATION | TRANSCRIPTION FACTOR | MELANOCYTE DEVELOPMENT | EXPRESSION | Gene Duplication | Lizards - classification | Fishes - classification | Species Specificity | Xenopus - genetics | Humans | Lizards - genetics | Receptors, Metabotropic Glutamate - metabolism | Phylogeny | Protein Isoforms - metabolism | Receptors, Thyroid Hormone - genetics | Receptors, Metabotropic Glutamate - genetics | Forkhead Transcription Factors - metabolism | Conserved Sequence | Lampreys - classification | Repressor Proteins - metabolism | Fishes - genetics | Receptors, Cell Surface - metabolism | Repressor Proteins - genetics | Forkhead Transcription Factors - genetics | Nerve Tissue Proteins - genetics | Lampreys - genetics | Protein Interaction Mapping | Biological Evolution | Nerve Tissue Proteins - metabolism | Receptors, Thyroid Hormone - metabolism | Animals | Xenopus - classification | Mice | Genome | Protein Isoforms - genetics | Receptors, Cell Surface - genetics | Genetic research | Analysis | Genes | Genomics | Protein-protein interactions
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11. Full Text "SAME SAME BUT DIFFERENT": REPLICATED ECOLOGICAL SPECIATION AT WHITE SANDS
by Erica Bree Rosenblum and Luke J. Harmon
Evolution, ISSN 0014-3820, 4/2011, Volume 65, Issue 4, pp. 946 - 960
Understanding the factors that promote or inhibit species formation remains a central focus in evolutionary biology. It has been difficult to make generalities... 
Population ecology | Ecological genetics | Colors | Lizards | Evolutionary genetics | Evolution | Ecology | Wildlife habitats | Species | Speciation | Gene flow | Genetic clustering | Speciation by selection | Adaptation | gene flow | genetic clustering | speciation by selection | MULTILOCUS GENOTYPE DATA | DIVERGENT SELECTION | lizards | EASTERN FENCE LIZARD | SCELOPORUS-UNDULATUS | EVOLUTIONARY BIOLOGY | PARAPATRIC SPECIATION | SYMPATRIC SPECIATION | NATURAL-SELECTION | GENETICS & HEREDITY | POPULATION-STRUCTURE | ECOLOGY | REPRODUCTIVE ISOLATION | Geography | Haplotypes | Species Specificity | Lizards - anatomy & histology | Adaptation, Biological - genetics | Pigmentation - physiology | Lizards - genetics | DNA Primers - genetics | Genetic Variation | Lizards - physiology | Animals | New Mexico | Genetic Markers - genetics | Genetic Speciation | Environment | Amplified Fragment Length Polymorphism Analysis | Body Weights and Measures
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