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1. Full Text Mechanistic differences between HIV-1 and SIV nucleocapsid proteins and cross-species HIV-1 genomic RNA recognition
by Post, Klara and Olson, Erik D and Naufer, M.Nabuan and Gorelick, Robert J and Rouzina, Ioulia and Williams, Mark C and Musier-Forsyth, Karin and Levin, Judith G and Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Retrovirology, ISSN 1742-4690, 12/2016, Volume 13, Issue 1, pp. 89 - 89
HIV-1 | SIV | Nucleic acid binding | Nucleocapsid proteins | Minus-strand transfer | Reverse transcription | Nucleic acid chaperone activity | Psi RNA packaging signal | Single molecule DNA stretching | Small angle X-ray scattering | Life Sciences & Biomedicine | Science & Technology | Virology | Genome, Viral | Humans | Nucleocapsid Proteins - chemistry | gag Gene Products, Human Immunodeficiency Virus - chemistry | Molecular Chaperones - chemistry | HIV-1 - genetics | Molecular Chaperones - physiology | Simian Immunodeficiency Virus - chemistry | Reverse Transcription | Simian Immunodeficiency Virus - genetics | Nucleocapsid Proteins - genetics | RNA, Viral - genetics | Nucleocapsid Proteins - metabolism | HIV-1 - chemistry | Protein Binding | gag Gene Products, Human Immunodeficiency Virus - genetics | Nucleic Acid Conformation | Physiological aspects | Genetic aspects | Research | Viral proteins | Simian immunodeficiency virus | HIV (Viruses) | Index Medicus | Minus strand transfer | Small angle X ray scattering | HIV 1
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2. Full Text Ribosome pausing at inefficient codons at the end of the replicase coding region is important for hepatitis c virus genome replication
by Gerresheim, Gesche K and Hess, Carolin S and Shalamova, Lyudmila A and Fricke, Markus and Marz, Manja and Andreev, Dmitri E and Shatsky, Ivan N and Niepmann, Michael
International journal of molecular sciences, ISSN 1661-6596, 09/2020, Volume 21, Issue 18, pp. 1 - 22
Translation | Antigenome | Minus strand | Wobble codon | Rare codon | Replication | HCV | Negative-strand | Ribosome pausing | Biochemistry & Molecular Biology | Physical Sciences | Chemistry | Life Sciences & Biomedicine | Chemistry, Multidisciplinary | Science & Technology | Index Medicus | replication | translation | ribosome pausing | rare codon
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3. Full Text 3,7-Dihydroxytropolones Inhibit Initiation of Hepatitis B Virus Minus-Strand DNA Synthesis
by Bak, Ellen and Miller, Jennifer T and Noronha, Andrea and Tavis, John and Gallicchio, Emilio and Murelli, Ryan P and Le Grice, Stuart F. J
Molecules (Basel, Switzerland), 10/2020, Volume 25, Issue 19, p. 4434
Biochemistry & Molecular Biology | Physical Sciences | Chemistry | Life Sciences & Biomedicine | Chemistry, Multidisciplinary | Science & Technology | Index Medicus | minus strand DNA synthesis | epsilon RNA | protein priming | Hepatitis B virus | 3,7-dihydroxytropolones
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4. Full Text Fundamental differences between the nucleic acid chaperone activities of HIV-1 nucleocapsid protein and Gag or Gag-derived proteins: Biological implications
by Wu, Tiyun and Datta, Siddhartha A.K and Mitra, Mithun and Gorelick, Robert J and Rein, Alan and Levin, Judith G
Virology (New York, N.Y.), ISSN 0042-6822, 2010, Volume 405, Issue 2, pp. 556 - 567
Infectious Disease | HIV-1 | Retrovirus | Capsid protein | Minus-strand transfer | Nucleic acid chaperone | Reverse transcription | Gag | Nucleocapsid protein | Nucleic acid-driven multimerization | Life Sciences & Biomedicine | Science & Technology | Virology | Cell Line | HIV-1 - metabolism | Molecular Chaperones - metabolism | Humans | Protein Multimerization | DNA, Viral - metabolism | Molecular Chaperones - genetics | HIV-1 - genetics | Reverse Transcription | gag Gene Products, Human Immunodeficiency Virus - metabolism | HIV-1 - physiology | gag Gene Products, Human Immunodeficiency Virus - genetics | Fluorescence Polarization | Nucleic Acid Conformation | DNA polymerases | Nucleic acids | Viral proteins | HIV (Viruses) | Analysis | Index Medicus
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5. Full Text HIV-1 Nucleocapsid Protein Switches the Pathway of Transactivation Response Element RNA/DNA Annealing from Loop–Loop “Kissing” to “Zipper”
by Vo, My-Nuong and Barany, George and Rouzina, Ioulia and Musier-Forsyth, Karin
Journal of molecular biology, ISSN 0022-2836, 2009, Volume 386, Issue 3, pp. 789 - 801
TAR RNA/DNA annealing | nucleic acid aggregation | nucleic acid chaperone activity | minus-strand transfer | HIV-1 nucleocapsid protein | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | gag Gene Products, Human Immunodeficiency Virus - metabolism | HIV-1 - physiology | Base Pairing | Models, Biological | Base Sequence | DNA, Viral - metabolism | Models, Molecular | Molecular Sequence Data | HIV Long Terminal Repeat | RNA, Viral - metabolism | Kinetics | Nucleic Acid Conformation | Genetic research | Molecular chaperones | RNA | DNA | Index Medicus
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6. Full Text Zinc Finger Structures in the Human Immunodeficiency Virus Type 1 Nucleocapsid Protein Facilitate Efficient Minus- and Plus-Strand Transfer
by Jianhui Guo and Tiyun Wu and Jada Anderson and Bradley F. Kane and Donald G. Johnson and Robert J. Gorelick and Louis E. Henderson and Judith G. Levin
Journal of Virology, ISSN 0022-538X, 10/2000, Volume 74, Issue 19, pp. 8980 - 8988
Life Sciences & Biomedicine | Science & Technology | Virology | Genome, Viral | Zinc Fingers | Nucleocapsid Proteins - genetics | HIV-1 - genetics | Humans | nucleocapsid protein | NC protein | plus-strand strong-stop DNA | zinc finger | minus-strand acceptor DNA | Index Medicus | AIDS/HIV
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7. Full Text Coronavirus Transcription: A Perspective
by Sawicki, S. G and Sawicki, D. L
2005, Current Topics in Microbiology and Immunology, ISBN 3540214941, Volume 287, 25
Equine Arteritis Virus | Sindbis Virus | Strand Synthesis | Minus Strand | Mouse Hepatitis Virus | Immunology | Life Sciences & Biomedicine | Microbiology | Science & Technology | Genome, Viral | Transcription, Genetic | Mice | Animals | Open Reading Frames - genetics | Murine hepatitis virus - genetics
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8. Full Text Packaging in dsRNA Viruses
by Mindich, Leonard
11/2011, Advances in Experimental Medicine and Biology, ISBN 1461409799, Volume 726
Core Particle | Cryoelectron Microscopy | Major Structural Protein | Genomic Segment | Minus Strand | Genome, Viral | Viral Proteins - chemistry | Models, Molecular | RNA Viruses - genetics | Viral Proteins - genetics | RNA Viruses - metabolism | Viral Proteins - metabolism | DNA Packaging | RNA, Viral - chemistry | Virus Assembly - genetics | Protein Conformation | RNA, Double-Stranded - metabolism | RNA, Viral - metabolism | Nucleic Acid Conformation | RNA Viruses - chemistry | RNA, Double-Stranded - chemistry
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9. Full Text Characterization of the contribution of spliced RNAs of hepatitis B virus to DNA synthesis in transfected cultures of Huh7 and HepG2 cells
by Abraham, Teresa M and Lewellyn, Eric B and Haines, Kathleen M and Loeb, Daniel D
Virology (New York, N.Y.), ISSN 0042-6822, 2008, Volume 379, Issue 1, pp. 30 - 37
Infectious Disease | Spliced RNA | CMV-IE promoter | Minus-strand DNA synthesis | Pregenomic RNA | Plus-strand DNA synthesis | Life Sciences & Biomedicine | Science & Technology | Virology | Liver - virology | Cell Line | RNA Splicing | DNA, Viral - biosynthesis | DNA, Circular - biosynthesis | Humans | DNA - biosynthesis | RNA, Viral - metabolism | Hepatitis B virus - physiology | DNA replication | RNA | DNA | DNA synthesis | Chemical properties | Hepatitis B virus | Hepatitis B | Index Medicus | minus-strand DNA synthesis | plus-strand DNA synthesis | pregenomic RNA | spliced RNA
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10. Full Text Sequences in the U3 region of human immunodeficiency virus 1 improve efficiency of minus strand transfer in infected cells
by Piekna-Przybylska, Dorota and Dykes, Carrie and Demeter, Lisa M and Bambara, Robert A
Virology (New York, N.Y.), ISSN 0042-6822, 2010, Volume 410, Issue 2, pp. 368 - 374
Infectious Disease | HIV-1 | Minus strand DNA transfer | tRNA 3Lys | TRNA | Life Sciences & Biomedicine | Science & Technology | Virology | RNA, Complementary - metabolism | Cell Line | HIV-1 - physiology | RNA, Viral - genetics | RNA, Complementary - genetics | Virus Replication | Humans | RNA, Transfer, Amino Acyl - metabolism | RNA, Transfer, Amino Acyl - genetics | RNA, Viral - metabolism | Mutation | HIV-1 - genetics | Virus diseases | HIV (Viruses) | Transfer RNA | Index Medicus | minus strand DNA transfer | tRNA3Lys
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