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Biochemistry, ISSN 0006-2960, 02/2012, Volume 51, Issue 5, pp. 986 - 994
Here we present a biophysical, structural, and computational analysis of the directed evolution of the human DNA repair protein O 6-alkylguanine-DNA... 
MOLPROBITY | STRUCTURE VALIDATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | IN-VIVO
Journal Article
The Journal of Physical Chemistry B, ISSN 1520-6106, 04/2017, Volume 121, Issue 15, pp. 3597 - 3606
We present the Simulation Enabled Estimation of Kinetic Rates (SEEKR) package, a suite of open-source scripts and tools designed to enable researchers to... 
PATHWAYS | STRUCTURE VALIDATION | DISSOCIATION | TRAJECTORIES | CHEMISTRY, PHYSICAL | MOLPROBITY | TIME | ELECTROSTATICS | PARAMETERS | ASSOCIATION | BROWNIAN DYNAMICS
Journal Article
NATURE METHODS, ISSN 1548-7091, 04/2015, Volume 12, Issue 4, pp. 361 - U129
We describe a general approach for refining protein structure models on the basis of cryo-electron microscopy maps with near-atomic resolution. The method... 
SPACE | PROTEIN STRUCTURES | ELECTRON | STRUCTURE VALIDATION | BIOCHEMICAL RESEARCH METHODS | MOLPROBITY | PHENIX
Journal Article
Current Opinion in Structural Biology, ISSN 0959-440X, 10/2019, Volume 58, pp. 166 - 174
•CryoEM maps at medium (3.5–6Å) resolution can be challenging to interpret.•Integration of multiple methods can inform cryoEM studies.•Mass spectrometry and... 
REFINEMENT | EM DENSITY MAPS | BIOCHEMISTRY & MOLECULAR BIOLOGY | MOLECULAR ARCHITECTURE | VALIDATION | MOLPROBITY | EWALD SPHERE CORRECTION | INTEGRATIVE STRUCTURE | BAYESIAN-APPROACH | ATOMIC MODELS | PREDICTION | CELL BIOLOGY
Journal Article
Acta Crystallographica Section D, ISSN 1399-0047, 04/2012, Volume 68, Issue 4, pp. 484 - 496
Journal Article
eLife, ISSN 2050-084X, 2018, Volume 7
Transient receptor potential melastatin 2 (TRPM2) is a Ca2+-permeable cation channel required for immune cell activation, insulin secretion, and body heat... 
SYSTEM | STRUCTURE VALIDATION | CALCIUM | SUSCEPTIBILITY | BIOLOGY | ION-CHANNEL | MOLPROBITY | PROTEINS | BIPOLAR | TOOLS | Inositol | Calcium (intracellular) | Channel gating | Electrophysiology | Insulin | Cytosol | Calcium permeability | Proteins | Transient receptor potential proteins | Cell activation | Microscopy | Ribose | Calcium conductance | Calcium-binding protein | Ligands | Software | Calcium (extracellular)
Journal Article