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Cell Reports, ISSN 2211-1247, 06/2015, Volume 11, Issue 11, pp. 1834 - 1843
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2017, Volume 7, Issue 1, pp. 6599 - 13
Various forms of protein (proteoforms) are generated by genetic variations, alternative splicing, alternative translation initiation, co- or post-translational... 
PEPTIDES | DATABASE | SEARCH | ACETYLATION | MS-GF PLUS | MULTIDISCIPLINARY SCIENCES | ALTERNATIVE TRANSLATION INITIATION | IDENTIFICATION | ACETYLTRANSFERASES | PROTEOMICS | INSIGHTS | Proteins | Alternative splicing | Translation | Proteolysis | Translation initiation | Post-translation | Negative selection | Genetic diversity | Codons | Index Medicus
Journal Article
Journal of Proteome Research, ISSN 1535-3893, 05/2018, Volume 17, Issue 5, pp. 1978 - 1982
Percolator is an important tool for greatly improving the results of a database search and subsequent downstream analysis. Using support vector machines... 
percolator | TRON | support vector machine | tandem mass spectrometry | machine learning | ACCURATE | SENSITIVE PEPTIDE IDENTIFICATION | SHOTGUN PROTEOMICS | MS-GF PLUS | BIOCHEMICAL RESEARCH METHODS | FALSE DISCOVERY RATES | DATABASE | NEWTON METHOD | Algorithms | Time Factors | Databases, Protein | Software | Proteomics - methods | Support Vector Machine | Machine Learning
Journal Article
Journal Article
BMC Genomics, ISSN 1471-2164, 03/2017, Volume 18, Issue Suppl 2, pp. 143 - 143
Background: The mass spectrometry based technical pipeline has provided a high-throughput, high-sensitivity and high-resolution platform for post-genomic... 
Tandem mass spectrometry | Entrapment sequence method | Target-decoy search | Proteomics | Quality control | PEPTIDE IDENTIFICATION | SHOTGUN PROTEOMICS | BAYESIAN NONPARAMETRIC MODEL | MS-GF PLUS | SENSITIVITY | VALIDATION | SEARCH TOOL | PROTEIN IDENTIFICATION | TANDEM MASS-SPECTRA | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | SPECTROMETRY | Sequence Analysis, Protein - methods | Archaeal Proteins - isolation & purification | Pyrococcus furiosus - chemistry | Datasets as Topic | Peptides - chemistry | Humans | Archaeal Proteins - chemistry | Tandem Mass Spectrometry | Peptides - isolation & purification | Databases, Protein | Search Engine | Proteomics - methods | Quality Control | High resolution | Peptides | Liver | Data bases | Search strategies | Fragmentation | Metastases | Datasets | Proteins | Search engines | Bioinformatics | Chambers | Spectroscopy | Construction | Archaea | Tables (data) | Amino acid sequence | Mass spectroscopy | Ions | Nucleic acids | Sun | Chromosome 1 | Scientific imaging | Software | Mass spectrometry | Mass spectra | Bayesian analysis | Methods | Identification methods | Hepatocellular carcinoma | Identification | Tryptic peptides | Optimization | Engines | Databases | Cleavage | Oxidation | Mathematical models | Colon | Stomach | Data analysis | Statistical analysis | Nucleotide sequence | Exploration | Data processing | Calibration | Database searching | Computer programs | Entrapment | Sensitivity | Algorithms | Reliability | Index Medicus
Journal Article
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