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The Journal of Chemical Physics, ISSN 0021-9606, 02/2019, Volume 150, Issue 5
Molecular dynamics simulations allow us to study the structure and dynamics of singlebiomolecules in microscopic detail. However, many processes occur on time... 
Dynamic structural analysis | Time dependence | Alanine | Computer simulation | Molecular dynamics | Biomolecules | Markov chains | Electric fields | Multiscale methods
Journal Article
The Journal of Chemical Physics, ISSN 0021-9606, 02/2019, Volume 150, Issue 5, p. 054103
Molecular dynamics simulations allow us to study the structure and dynamics of single biomolecules in microscopic detail. However, many processes occur on time... 
CHEMISTRY, PHYSICAL | SIMULATION | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | Markov Chains | Models, Chemical | Dipeptides - chemistry | Molecular Dynamics Simulation
Journal Article
Expert Systems With Applications, ISSN 0957-4174, 06/2019, Volume 124, pp. 82 - 96
Journal Article
The Journal of Chemical Physics, ISSN 0021-9606, 12/2016, Volume 145, Issue 21, p. 214107
Accurate modeling and numerical simulation of reaction kinetics is a topic of steady interest. We consider the spatiotemporal chemical master equation (ST-CME)... 
CHEMISTRY, PHYSICAL | COUPLED CHEMICAL-REACTIONS | STOCHASTIC SIMULATION | KINETICS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | Organic chemistry | Computer simulation | Compartments | Reaction kinetics | Markov chains | Galerkin method | Diffusion
Journal Article
The Journal of Chemical Physics, ISSN 0021-9606, 10/2017, Volume 147, Issue 15, p. 152721
Non-equilibrium Markov State Modeling (MSM) has recently been proposed by Pellegrini et al. [Phys. Rev. E 94, 053001 (2016)] as a possible route to construct a... 
FRICTION | CHEMISTRY, PHYSICAL | PERRON CLUSTER-ANALYSIS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | Dynamic tests | Computer simulation | Two dimensional models | Markov chains | Modelling | Equations of motion | Sliding friction | Physics - Statistical Mechanics
Journal Article
Journal of Volcanology and Geothermal Research, ISSN 0377-0273, 09/2016, Volume 324, pp. 134 - 143
In this paper we propose an automatic volcano event detection system based on Hidden Markov Model (HMM) with state and event duration models. Since different... 
Signal processing | Volcano monitoring | Duration model | Pattern recognition | Hidden Markov models | SYSTEM | GEOSCIENCES, MULTIDISCIPLINARY | SIGNALS | CONSTRAINTS | SPEECH RECOGNITION | EARTHQUAKE CLASSIFICATION | Markov processes | Models | Volcanoes | Analysis | Detectors | Tectonics (Geology)
Journal Article
Journal Article