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1. Full Text A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
by Li, Heng
Bioinformatics, ISSN 1367-4803, 11/2011, Volume 27, Issue 21, pp. 2987 - 2993
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Data Interpretation, Statistical | Genetics, Population - methods | Genetic Association Studies | Gene Frequency | Humans | Alleles | Genotype | Polymorphism, Single Nucleotide | Mutation | Sequence Analysis, DNA | Index Medicus | Quantitative Biology - Genomics | Original Papers
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2. Full Text CD-HIT: Accelerated for clustering the next-generation sequencing data
by Fu, Limin and Niu, Beifang and Zhu, Zhengwei and Wu, Sitao and Li, Weizhong
Bioinformatics, ISSN 1367-4803, 12/2012, Volume 28, Issue 23, pp. 3150 - 3152
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Sequence Analysis, Protein - methods | Computational Biology - methods | Software | Algorithms | Cluster Analysis | Index Medicus | Applications Note
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3. Full Text A high-performance computing toolset for relatedness and principal component analysis of SNP data
by Zheng, Xiuwen and Levine, David and Shen, Jess and Gogarten, Stephanie M and Laurie, Cathy and Weir, Bruce S
Bioinformatics, ISSN 1367-4803, 12/2012, Volume 28, Issue 24, pp. 3326 - 3328
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Genome-Wide Association Study | Polymorphism, Single Nucleotide | Software | Algorithms | Principal Component Analysis | Humans | Index Medicus | Applications Note
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4. Full Text phangorn: Phylogenetic analysis in R
by Schliep, Klaus Peter
Bioinformatics, ISSN 1367-4803, 02/2011, Volume 27, Issue 4, pp. 592 - 593
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Computational Biology - methods | Likelihood Functions | Models, Genetic | Software | Phylogeny | Index Medicus | Applications Note
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5. Full Text Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
by Kearse, Matthew and Moir, Richard and Wilson, Amy and Stones-Havas, Steven and Cheung, Matthew and Sturrock, Shane and Buxton, Simon and Cooper, Alex and Markowitz, Sidney and Duran, Chris and Thierer, Tobias and Ashton, Bruce and Meintjes, Peter and Drummond, Alexei
Bioinformatics, ISSN 1367-4803, 06/2012, Volume 28, Issue 12, pp. 1647 - 1649
Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | User-Computer Interface | Computational Biology - methods | Algorithms | Base Sequence | Programming Languages | Software | Sequence Analysis, DNA - methods | Index Medicus | Applications Note
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6. Full Text Toward the estimation of the absolute quality of individual protein structure models
by Benkert, Pascal and Biasini, Marco and Schwede, Torsten
Bioinformatics, ISSN 1367-4803, 02/2011, Volume 27, Issue 3, pp. 343 - 350
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Models, Molecular | Regression Analysis | Data Interpretation, Statistical | Proteins - chemistry | Humans | Index Medicus | Original Papers
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7. Full Text DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
by Librado, P and Rozas, J
Bioinformatics, ISSN 1367-4803, 6/2009, Volume 25, Issue 11, pp. 1451 - 1452
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Haplotypes | Polymorphism, Genetic - genetics | Computational Biology - methods | DNA - chemistry | Software | Genome | Index Medicus | Polimorfisme genètic | Genètica | Bioinformàtica | Computer software | Programari | Genetics | Data processing | Processament de dades | Bioinformatics | Genetic polymorphisms
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