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1. Full Text Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type‐specific transcription factor networks
by Sijacic, Paja and Bajic, Marko and McKinney, Elizabeth C and Meagher, Richard B and Deal, Roger B
The Plant Journal, ISSN 0960-7412, 04/2018, Volume 94, Issue 2, pp. 215 - 231
Cell differentiation is driven by changes in the activity of transcription factors ( TF s) and subsequent alterations in transcription. To study this process,... 
Arabidopsis thaliana | transcription factor | cell differentiation | stem cell | shoot meristem | mesophyll | INTACT | ATAC | chromatin | seq | ATAC-seq | REGULATORY DNA | TOLERANCE | PATTERNS | PLANT SCIENCES | FACTOR-BINDING | ETHYLENE | GENE-EXPRESSION MAP | GROWTH | SHOOT APICAL MERISTEM | DYNAMICS | REPRESSOR | Chromatin - metabolism | Meristem - cytology | Arabidopsis Proteins - physiology | Transcription Factors - physiology | Arabidopsis - cytology | Stem Cells - metabolism | Plant Shoots - cytology | Plant Leaves - cytology | Arabidopsis - metabolism | Plant Leaves - metabolism | Plant Shoots - metabolism | Gene Expression Regulation, Plant | Meristem - metabolism | Mesophyll Cells - metabolism | Chromatin | Analysis | Stem cells | Genetic research | DNA binding proteins | Cell differentiation | Binding | Transcription factors | Purification | Accessibility | Gene regulation | Differentiation (biology) | T cell receptors | Regulatory sequences | Transposase | Gene expression | Leaves | Mesophyll | Plasticity (developmental) | Index Medicus
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2. Full Text Characterizing Regulatory and Functional Differentiation between Maize Mesophyll and Bundle Sheath Cells by Transcriptomic Analysis
by Yao-Ming Chang and Wen-Yu Liu and Arthur Chun-Chieh Shih and Meng-Ni Shen and Chen-Hua Lu and Mei-Yeh Jade Lu and Hui-Wen Yang and Tzi-Yuan Wang and Sean C.-C. Chen and Stella Maris Chen and Wen-Hsiung Li and Maurice S.B. Ku
Plant Physiology, ISSN 0032-0889, 9/2012, Volume 160, Issue 1, pp. 165 - 177
To study the regulatory and functional differentiation between the mesophyll (M) and bundle sheath (BS) cells of maize (Zea mays), we isolated large quantities... 
Transcriptomes | Chloroplasts | RNA | Cell walls | Genome Analysis | Genes | Corn | Plants | C4 plants | Cells | Plant cells | PHOSPHOENOLPYRUVATE CARBOXYKINASE | ARABIDOPSIS-THALIANA | CO2-CONCENTRATING MECHANISM | PYRUVATE | RNA-SEQ | LEAVES | METABOLIC PATHWAYS | CHLOROPLASTS | PLANTS | C-4 PHOTOSYNTHESIS | PLANT SCIENCES | Protein Biosynthesis | Genes, Plant | Transcriptome | Gene Expression Profiling | Plant Epidermis - genetics | RNA, Plant - analysis | Plant Epidermis - metabolism | Protoplasts - cytology | Protoplasts - metabolism | Gene Expression Regulation, Plant | Plant Vascular Bundle - genetics | Cell Differentiation | Mesophyll Cells - metabolism | Plant Proteins - metabolism | Zea mays - metabolism | Mesophyll Cells - cytology | Plasmodesmata - genetics | Plasmodesmata - metabolism | Zea mays - genetics | Plant Cells - metabolism | Signal Transduction | Cell Wall - genetics | Chromosome Mapping | RNA, Plant - genetics | Transcription Factors - genetics | Plant Leaves - cytology | Protein Transport | Transcription Factors - metabolism | Zea mays - cytology | Plant Leaves - genetics | Plant Leaves - metabolism | Cell Wall - metabolism | Plant Vascular Bundle - cytology | Plant Vascular Bundle - metabolism | Photosynthesis | RNA sequencing | Plant genetics | Plant cellular control mechanisms | Genetic aspects | Research | Gene expression | Index Medicus
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3. Full Text Arabidopsis ATG8-INTERACTING PROTEIN1 Is Involved in Autophagy-Dependent Vesicular Trafficking of Plastid Proteins to the Vacuole
by Simon Michaeli and Arik Honig and Hanna Levanony and Hadas Peled-Zehavi and Gad Galili
The Plant Cell, ISSN 1040-4651, 10/2014, Volume 26, Issue 10, pp. 4084 - 4101
Selective autophagy has been extensively studied in various organisms, but knowledge regarding its functions in plants, particularly in organelle turnover, is... 
Proteins | Mesophyll cells | Starvation | RESEARCH ARTICLES | Cellular senescence | Plants | Plastids | Vacuoles | Chlorophylls | Plant cells | Seedlings | RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE | SYSTEM | FLORAL-DIP | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHLOROPLASTS | SELECTIVE AUTOPHAGY | PLANT SCIENCES | CELL BIOLOGY | LEAF SENESCENCE | PLANT AUTOPHAGY | DEGRADATION | ENDOPLASMIC-RETICULUM | STRESS | Vesicular Transport Proteins - metabolism | Endoplasmic Reticulum - metabolism | Autophagy | Arabidopsis Proteins - metabolism | Plants, Genetically Modified | Salt-Tolerance - genetics | Plastids - metabolism | Mesophyll Cells - metabolism | Carbon - metabolism | Salt-Tolerant Plants - metabolism | Arabidopsis Proteins - genetics | Vesicular Transport Proteins - genetics | Microscopy, Electron | Plant Leaves - cytology | Arabidopsis - metabolism | Protein Transport | Arabidopsis - genetics | Plant Leaves - genetics | Plant Leaves - metabolism | Plastids - ultrastructure | Transport Vesicles - metabolism | Protein Binding | Vacuoles - metabolism | Luminescent Proteins - genetics | Mutation | Chloroplast Proteins - metabolism | Luminescent Proteins - metabolism | Salt-Tolerant Plants - genetics | Arabidopsis thaliana | Botanical research | Protein research | Physiological aspects | Cellular signal transduction | Research | Binding proteins | Index Medicus
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4. Full Text A Bistable Circuit Involving SCARECROW-RETINOBLASTOMA Integrates Cues to Inform Asymmetric Stem Cell Division
by Cruz-Ramírez, Alfredo and Díaz-Triviño, Sara and Blilou, Ikram and Grieneisen, Verônica A and Sozzani, Rosangela and Zamioudis, Christos and Miskolczi, Pál and Nieuwland, Jeroen and Benjamins, René and Dhonukshe, Pankaj and Caballero-Pérez, Juan and Horvath, Beatrix and Long, Yuchen and Mähönen, Ari Pekka and Zhang, Hongtao and Xu, Jian and Murray, James A.H and Benfey, Philip N and Bako, Laszlo and Marée, Athanasius F.M and Scheres, Ben and Umeå Plant Science Centre (UPSC) and Institutionen för fysiologisk botanik and Umeå universitet and Teknisk-naturvetenskapliga fakulteten
Cell, ISSN 0092-8674, 08/2012, Volume 150, Issue 5, pp. 1002 - 1015
In plants, where cells cannot migrate, asymmetric cell divisions (ACDs) must be confined to the appropriate spatial context. We investigate tissue-generating... 
ARABIDOPSIS ROOT-MERISTEM | AUXIN TRANSPORT | GENE | SPLIT LUCIFERASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | GROWTH | PROTEIN-PROTEIN INTERACTIONS | TUMOR-SUPPRESSOR | PLANTS | DIFFERENTIATION | CYCLE | CELL BIOLOGY | Amino Acid Sequence | Phosphorylation | Cyclin-Dependent Kinases - metabolism | Plant Roots - metabolism | Indoleacetic Acids - metabolism | Arabidopsis - cytology | Asymmetric Cell Division | Molecular Sequence Data | Plant Roots - cytology | Arabidopsis - metabolism | Arabidopsis Proteins - metabolism | Sequence Alignment | Mesophyll Cells - metabolism | Cyclin D - metabolism | Molecular genetics | Plant physiology | Proteolysis | Developmental biology | Analysis | Stem cells | Plant genetics | Cell division | Museums | Index Medicus | Biological Sciences | Naturvetenskap | Biokemi och molekylärbiologi | Biologiska vetenskaper | Biochemistry and Molecular Biology | Natural Sciences | Cellbiologi | Cell Biology
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5. Full Text Cell-and stimulus type-specific intracellular free Ca2+ signals in Arabidopsis
by Martí, María C and Stancombe, Matthew A and Webb, Alex A.R
Plant Physiology, ISSN 0032-0889, 10/2013, Volume 163, Issue 2, pp. 625 - 634
Appropriate stimulus-response coupling requires that each signal induces a characteristic response, distinct from that induced by other signals, and that there... 
CIRCADIAN CLOCK | CYTOSOLIC-FREE CA2 | INCREASE | CALCIUM | LIGHT | PLANTS | HYDROGEN-PEROXIDE | GUARD-CELLS | COLD | OSCILLATIONS | PLANT SCIENCES | Plant Vascular Bundle - drug effects | Calcium - metabolism | Sodium Chloride - pharmacology | Transcriptional Activation - drug effects | Plant Stomata - metabolism | Plant Epidermis - metabolism | DNA-Binding Proteins - metabolism | Aequorin - metabolism | Plant Stomata - cytology | Plant Stomata - drug effects | Mesophyll Cells - drug effects | Mesophyll Cells - metabolism | Stress, Physiological - drug effects | Green Fluorescent Proteins - metabolism | Cold Temperature | Arabidopsis - drug effects | Intracellular Space - drug effects | Arabidopsis - cytology | Hydrogen Peroxide - pharmacology | Plant Epidermis - drug effects | Organ Specificity | Arabidopsis - metabolism | Transcription Factors - metabolism | Calcium Signaling - drug effects | Intracellular Space - metabolism | Plant Vascular Bundle - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Enhancer Elements, Genetic - genetics | Circadian Rhythm - drug effects | Index Medicus
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6. Full Text Isolation of Cells Specialized in Anticancer Alkaloid Metabolism by Fluorescence-Activated Cell Sorting
by Inês Carqueijeiro and Ana Luísa Guimarães and Sara Bettencourt and Teresa Martínez-Cortés and Joana G. Guedes and Rui Gardner and Telma Lopes and Cláudia Andrade and Cláudia Bispo and Nuno Pimpão Martins and Paula Andrade and Patrícia Valentão and Inês M. Valente and José A. Rodrigues and Patrícia Duarte and Mariana Sottomayor
Plant Physiology, ISSN 0032-0889, 8/2016, Volume 171, Issue 4, pp. 2371 - 2378
Plant specialized metabolism often presents a complex cell-specific compartmentation essential to accomplish the biosynthesis of valuable plant natural... 
Research Report | PLANT | LOCALIZATION | CATHARANTHUS-ROSEUS | PATHWAY | BIOSYNTHESIS | INDOLE ALKALOIDS | PLANT SCIENCES | Vinblastine - metabolism | Flow Cytometry - methods | Plant Leaves - metabolism | Catharanthus - cytology | Secologanin Tryptamine Alkaloids - metabolism | Mesophyll Cells - metabolism | Cell Separation - methods | Plant Leaves - cytology | Catharanthus - metabolism | Mesophyll Cells - cytology | Index Medicus
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7. Full Text Sphingosine‐1‐phosphate lyase is expressed by CD68+ cells on the parenchymal side of marginal reticular cells in human lymph nodes
by Park, Saem Mul and Angel, Catherine E and McIntosh, Julie D and Brooks, Anna E. S and Middleditch, Martin and Chen, Chun‐Jen J and Ruggiero, Katya and Cebon, Jonathan and Rod Dunbar, P
European Journal of Immunology, ISSN 0014-2980, 08/2014, Volume 44, Issue 8, pp. 2425 - 2436
Lymph nodes (LNs) form the intersection between the vascular and lymphatic systems. Lymphocytes and antigen‐presenting cells (APCs) traffic between these... 
Lymphocyte egress | Marginal reticular cells | Lymph node | FTY720 | Sphingosine 1‐phosphate | Sphingosine 1-phosphate | ACTIVATION | DENDRITIC CELLS | RECEPTOR | IMMUNOLOGY | ORGANS | INHIBITION | ENDOTHELIAL-CELLS | ENHANCEMENT | EGRESS | STROMAL CELLS | Lymphocytes - metabolism | Lysophospholipids - metabolism | Humans | Lymphatic System - cytology | Aldehyde-Lyases - biosynthesis | Lymph Nodes - metabolism | Monocytes - metabolism | Lymphocytes - cytology | Lymphatic System - enzymology | Lymph Nodes - cytology | Cell Movement - physiology | Antigens, CD - metabolism | Lymph Nodes - enzymology | Sphingosine - analogs & derivatives | Antigens, Differentiation, Myelomonocytic - metabolism | Mesophyll Cells - enzymology | Lymphatic System - metabolism | Lymphocytes - enzymology | Mesophyll Cells - metabolism | Sphingosine - metabolism | Mesophyll Cells - cytology | Phosphates | Enzymes | Muscle proteins | Sphingosine | Medical research | Rodents | Sinuses | Index Medicus
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8. Full Text Resolving the central metabolism of Arabidopsis guard cells
by Robaina-Estévez, Semidán and Daloso, Danilo M and Zhang, Youjun and Fernie, Alisdair R and Nikoloski, Zoran
Scientific Reports, ISSN 2045-2322, 12/2017, Volume 7, Issue 1, pp. 8307 - 13
Photosynthesis and water use efficiency, key factors affecting plant growth, are directly controlled by microscopic and adjustable pores in the leaf-the... 
VICIA-FABA L | FLUX ANALYSIS | SUSPENSION CULTURES | CRASSULACEAN ACID METABOLISM | MULTIDISCIPLINARY SCIENCES | STOMATAL FUNCTION | WATER-USE EFFICIENCY | PHOSPHOENOLPYRUVATE CARBOXYLASE | POTATO-TUBERS | CARBOHYDRATE-METABOLISM | MASS-SPECTROMETRY | Reproducibility of Results | Carbon Dioxide - metabolism | Plant Cells - metabolism | Energy Metabolism | Malates - metabolism | Cytosol - metabolism | Workflow | Mesophyll Cells - metabolism | Photosynthesis | Arabidopsis - metabolism | Citric Acid Cycle | Sucrose | Transcription | Carbon dioxide | Water use | Guard cells | Environmental changes | Stomata | Genomes | Metabolism | Mesophyll | Molecular modelling | Pores | Phosphoenolpyruvate carboxylase | Index Medicus
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9. Full Text C3 plants enhance rates of photosynthesis by reassimilating photorespired and respired CO2
by BUSCH, FLORIAN A and SAGE, TAMMY L and COUSINS, ASAPH B and SAGE, ROWAN F
Plant, Cell & Environment, ISSN 0140-7791, 01/2013, Volume 36, Issue 1, pp. 200 - 212
Photosynthetic carbon gain in plants using the C 3 photosynthetic pathway is substantially inhibited by photorespiration in warm environments, particularly in... 
photorespiration | membrane inlet mass spectrometry | respiration in the light | refixation | chloroplast coverage | Membrane inlet mass spectrometry | Chloroplast coverage | Respiration in the light | Photorespiration | Refixation | Ribulose-Bisphosphate Carboxylase - metabolism | Carbon Dioxide - metabolism | Cell Respiration | Oryza - metabolism | Chloroplasts - physiology | Mesophyll Cells - metabolism | Mitochondria - metabolism | Carbon Isotopes - metabolism | Photosynthesis | Triticum - metabolism | Index Medicus
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10. Full Text Bundle‐sheath cell regulation of xylem‐mesophyll water transport via aquaporins under drought stress: a target of xylem‐borne ABA?
by Shatil‐Cohen, Arava and Attia, Ziv and Moshelion, Menachem
The Plant Journal, ISSN 0960-7412, 07/2011, Volume 67, Issue 1, pp. 72 - 80
The hydraulic conductivity of the leaf vascular system ( K leaf ) is dynamic and decreases rapidly under drought stress, possibly in response to the stress... 
xylem‐sap ABA | bundle‐sheath cell | osmotic water permeability | drought stress | aquaporin | bundle-sheath cell | xylem-sap ABA | WILD-TYPE | SHOOT | HYDRAULIC CONDUCTANCE | PLANT SCIENCES | ARABIDOPSIS LEAVES | STOMATAL CONTROL | LEAF TISSUES | GENE-EXPRESSION | PLANTS | ABSCISIC-ACID | PLASMA-MEMBRANE AQUAPORINS | Arabidopsis - physiology | Plant Transpiration - physiology | Signal Transduction | Protoplasts | Stress, Physiological | Water - metabolism | Aquaporins - metabolism | Mercuric Chloride - pharmacology | Osmosis | Plant Stomata - metabolism | Arabidopsis - metabolism | Abscisic Acid - pharmacology | Biological Transport | Plant Leaves - metabolism | Xylem - metabolism | Droughts | Mesophyll Cells - metabolism | Plant Growth Regulators - pharmacology | Plant Stomata - physiology | Plant Leaves - physiology | Hydrogeology | Permeability | Aquaporins | Plant biology | Leaves | Chemistry | Cellular biology | Drought | Index Medicus
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11. Full Text Cell-specific localization of alkaloids in Catharanthus roseus stem tissue measured with Imaging MS and Single-cell MS
by Kotaro Yamamoto and Katsutoshi Takahashi and Hajime Mizuno and Aya Anegawa and Kimitsune Ishizaki and Hidehiro Fukaki and Miwa Ohnishi and Mami Yamazaki and Tsutomu Masujima and Tetsuro Mimura
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 4/2016, Volume 113, Issue 14, pp. 3891 - 3896
(L.) G. Don is a medicinal plant well known for producing antitumor drugs such as vinblastine and vincristine, which are classified as terpenoid indole... 
Catharanthus roseus | Idioblast cell | Single-cell MS | Imaging MS | Terpenoid indole alkaloid | MADAGASCAR PERIWINKLE | idioblast cell | SIEVE ELEMENTS | MULTIDISCIPLINARY SCIENCES | TANDEM MASS-SPECTROMETRY | PLANT-TISSUES | OPIUM POPPY | PATHWAY | terpenoid indole alkaloid | BIOSYNTHESIS | INDOLE ALKALOIDS | DRUG COMPONENTS | INTERCELLULAR TRANSLOCATION | Tandem Mass Spectrometry | Plant Stems - metabolism | Plant Epidermis - cytology | Secologanin Tryptamine Alkaloids - metabolism | Mesophyll Cells - metabolism | Vinca Alkaloids - metabolism | Plant Epidermis - metabolism | Plants, Medicinal - metabolism | Principal Component Analysis | Catharanthus - metabolism | Mesophyll Cells - cytology | Herbal medicine | Fluorescence | Tissue | Mass spectrometry | Cells | Index Medicus | Biological Sciences
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12. Full Text Physiological and structural tradeoffs underlying the leaf economics spectrum
by Onoda, Yusuke and Wright, Ian J and Evans, John R and Hikosaka, Kouki and Kitajima, Kaoru and Niinemets, Ülo and Poorter, Hendrik and Tosens, Tiina and Westoby, Mark
New Phytologist, ISSN 0028-646X, 06/2017, Volume 214, Issue 4, pp. 1447 - 1463
The leaf economics spectrum ( LES ) represents a suite of intercorrelated leaf traits concerning construction costs per unit leaf area, nutrient... 
nitrogen allocation | biodiversity | anatomy | photosynthesis | leaf economics spectrum | cell walls | mesophyll conductance | MESOPHYLL DIFFUSION CONDUCTANCE | CARBON-ISOTOPE DISCRIMINATION | CO2 TRANSFER CONDUCTANCE | POPULUS-BALSAMIFERA L | PLANT SCIENCES | DECREASES INTERNAL CONDUCTANCE | GROWTH IRRADIANCE | WATER-USE EFFICIENCY | CELL WALL PROTEINS | PHOTOSYNTHETIC CAPACITY | NITROGEN-USE EFFICIENCY | Ribulose-Bisphosphate Carboxylase - metabolism | Nitrogen - metabolism | Carbon Dioxide - metabolism | Cell Wall - metabolism | Plant Leaves - anatomy & histology | Mesophyll Cells - metabolism | Plant Proteins - metabolism | Cell Wall - chemistry | Diffusion | Plant Leaves - physiology | Mesophyll Cells - chemistry | Proteins | Physiological aspects | Economic aspects | Photosynthesis | Analysis | Costs | Growth | Carbon dioxide | Leaf area | Tissues | Components | Leaves | Investments | Efficiency | Physiology | Economics | Nutrients (mineral) | Construction | Cell walls | Dye dispersion | Data processing | Nutrient concentrations | Construction costs | Mass | Diffusion layers | Mesophyll | Fixation | Life span | Carbon fixation | Index Medicus
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