Articles

Search Articles

Advanced search
Help

Catalogue

Articles

Databases

X
Search Filters
Format Format
Format Format
X
Sort by Item Count (A-Z)
Filter by Count
Journal Article (803) 803
Publication (100) 100
Book Chapter (18) 18
Data Set (16) 16
Conference Proceeding (4) 4
Dissertation (3) 3
Book / eBook (1) 1
Book Review (1) 1
Magazine Article (1) 1
more...
Subjects Subjects
Subjects Subjects
X
Sort by Item Count (A-Z)
Filter by Count
metabarcoding (595) 595
ecology (361) 361
biodiversity (316) 316
index medicus (291) 291
diversity (228) 228
deoxyribonucleic acid--dna (227) 227
dna (226) 226
biological diversity (176) 176
evolutionary biology (171) 171
analysis (154) 154
dna metabarcoding (152) 152
environmental dna (147) 147
communities (143) 143
identification (128) 128
microbiology (120) 120
animals (112) 112
fungi (112) 112
dna sequencing (111) 111
biochemistry & molecular biology (107) 107
environmental sciences (102) 102
ecosystems (100) 100
taxonomy (92) 92
diet (89) 89
life sciences (86) 86
phylogeny (84) 84
next-generation sequencing (82) 82
gene sequencing (76) 76
marine & freshwater biology (72) 72
nucleotide sequencing (69) 69
bacteria (68) 68
microorganisms (66) 66
dna barcoding (65) 65
high-throughput sequencing (65) 65
research (65) 65
edna (63) 63
genetic research (63) 63
dna barcoding, taxonomic - methods (60) 60
species (59) 59
primers (58) 58
abundance (57) 57
ecosystem (57) 57
methods (56) 56
dna barcoding, taxonomic (54) 54
metagenomics (53) 53
multidisciplinary sciences (53) 53
patterns (53) 53
rna (52) 52
community composition (51) 51
sediments (51) 51
sequences (50) 50
biodiversity assessment (49) 49
biology (49) 49
community structure (49) 49
original research (49) 49
prey (49) 49
bioinformatics (46) 46
nucleotide sequence (46) 46
plant sciences (46) 46
taxa (46) 46
biomonitoring (45) 45
fish (45) 45
microbiota (45) 45
evolution (40) 40
polymerase chain reaction (40) 40
biological sciences (39) 39
samples (39) 39
biological monitoring (38) 38
conservation (38) 38
microbial communities (38) 38
ancient dna (37) 37
soil (37) 37
composition (36) 36
genetic aspects (36) 36
genetics & heredity (36) 36
microbiome (36) 36
species richness (36) 36
animal behavior (35) 35
community (35) 35
environmental aspects (35) 35
microbial ecology (35) 35
morphology (35) 35
pcr (35) 35
medicine (34) 34
species diversity (34) 34
community ecology (33) 33
ecological monitoring (33) 33
usage (33) 33
biotechnology & applied microbiology (32) 32
environmental monitoring (32) 32
natural sciences (32) 32
naturvetenskap (32) 32
soil microbiology (32) 32
studies (32) 32
barcode (31) 31
biologiska vetenskaper (31) 31
genetics (31) 31
genomics (31) 31
insects (31) 31
plankton (31) 31
soils (31) 31
more...
Language Language
Publication Date Publication Date
Click on a bar to filter by decade
Slide to change publication date range


1. Full Text A semi-automated protocol for NGS metabarcoding and fungal analysis in forensic
by Giampaoli, S and De Vittori, E and Frajese, G.V and Paytuví, A and Sanseverino, W and Anselmo, A and Barni, F and Berti, A
Forensic Science International, ISSN 0379-0738, 01/2020, Volume 306, p. 110052
Metabarcoding through Next Generation Sequencing (NGS) has revolutionized environmental biological studies. The availability of this technical approach has... 
Fungi | Metabarcoding | NGS | Forensic science
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
2. Full Text MitoFish and mifish pipeline: A mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding
by Sato, Yukuto and Miya, Masaki and Fukunaga, Tsukasa and Sado, Tetsuya and Iwasaki, Wataru
Molecular Biology and Evolution, ISSN 0737-4038, 06/2018, Volume 35, Issue 6, pp. 1553 - 1555
Fish mitochondrial genome (mitogenome) data form a fundamental basis for revealing vertebrate evolution and hydrosphere ecology. Here, we report recent... 
Environmental DNA | Database | Metabarcoding | Fish | Mitochondrial genome | EVOLUTIONARY BIOLOGY | database | BIOCHEMISTRY & MOLECULAR BIOLOGY | fish | GENETICS & HEREDITY | mitochondrial genome | metabarcoding environmental DNA | metabarcoding | Resources | environmental DNA
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
3. Full Text Community dynamics and function of algae and bacteria during winter in central European great lakes
by Bullerjahn, George S and McKay, Robert Michael L and Bernát, Gábor and Prášil, Ondřej and Vörös, Lajos and Pálffy, Károly and Tugyi, Nóra and Somogyi, Boglárka
Journal of Great Lakes Research, ISSN 0380-1330, 07/2019
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
4. Full Text How does marker choice affect your diet analysis: Comparing genetic markers and digestion levels for diet metabarcoding of tropical-reef piscivores
by Devloo-Delva, Floriaan and Huerlimann, Roger and Chua, Gladys and Matley, Jordan K and Heupel, Michelle R and Simpfendorfer, Colin A and Maes, Gregory E
Marine and Freshwater Research, ISSN 1323-1650, 2019, Volume 70, Issue 1, pp. 8 - 18
Tropical reefs are highly diverse ecosystems, and reliable biomonitoring, through diet metabarcoding, is needed to understand present and future trophic... 
16S metabarcoding primers | amplicon length | metabarcoding performance | coral trout | marine predators | gut contents | SIZE | PRIMERS | LIBRARY | IDENTIFICATION | FISHERIES | DNA | MARINE & FRESHWATER BIOLOGY | OCEANOGRAPHY | DIVERSITY | LIMNOLOGY
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
5. Full Text PSXI-34 Diet selection by Raramuri Criollo and Angus crossbreds in the Chihuahuan Desert
by Spiegal, S and Nyamuryekung’e, S and Estell, R and Cibils, A and James, D and Gonzalez, A and McIntosh, M
Journal of Animal Science, ISSN 0021-8812, 12/2018, Volume 96, Issue suppl_3, pp. 224 - 224
Abstract The Raramuri Criollo (RC) cattle biotype has undergone natural selection for hundreds of generations in northern Mexico. Little information about diet... 
DNA metabarcoding | diet selection | Abstracts | Criollo beef cattle
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
6. Full Text Analysis of temporal fecal microbiota dynamics in weaner pigs with and without exposure to enterotoxigenic Escherichia coli1,2
by Pollock, Jolinda and Gally, David L and Glendinning, Laura and Tiwari, Raksha and Hutchings, Michael R and Houdijk, Jos G M
Journal of Animal Science, ISSN 0021-8812, 09/2018, Volume 96, Issue 9, pp. 3777 - 3790
Abstract The primary aim of this work was to study potential effects of subclinical enterotoxigenic Escherichia coli (ETEC) exposure on porcine fecal... 
weaner pigs | metabarcoding | ETEC | Microbiome | 16S rRNA gene
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
7. Full Text Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity
by Thomsen, Philip Francis and Willerslev, Eske
Biological Conservation, ISSN 0006-3207, 03/2015, Volume 183, pp. 4 - 18
The continuous decline in Earth’s biodiversity represents a major crisis and challenge for the 21st century, and there is international political agreement to... 
Environmental DNA | DNA metabarcoding | Extinction | Conservation | eDNA | Biodiversity | Monitoring | EDNA | ARCTIC VEGETATION | EXTRACELLULAR DNA | ANCIENT DNA | SPECIES DETECTION | LAKE-SEDIMENTS | ENVIRONMENTAL SCIENCES | MICROBIAL DIVERSITY | DEEP-SEA | FUNGAL COMMUNITIES | ECOLOGY | BIODIVERSITY CONSERVATION | PCR | Biological diversity conservation | DNA | Surveys | Wildlife conservation | Populations | Ecosystems | Deoxyribonucleic acid | Biological | Environmental monitoring | Sampling
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
8. Full Text Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixtures
by Bell, Karen L and Burgess, Kevin S and Botsch, Jamieson C and Dobbs, Emily K and Read, Timothy D and Brosi, Berry J
Molecular Ecology, ISSN 0962-1083, 01/2019, Volume 28, Issue 2, pp. 431 - 455
Pollen DNA metabarcoding—marker‐based genetic identification of potentially mixed‐species pollen samples—has applications across a variety of fields. While... 
pollen DNA barcoding | amplification bias | DNA extraction bias | copy number bias | quantitative DNA metabarcoding | DNA metabarcoding | SEDIMENTARY DNA | FORENSIC PALYNOLOGY | RECONSTRUCTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | ANCIENT DNA | IDENTIFICATION | LAKE-SEDIMENTS | EVOLUTIONARY BIOLOGY | ENVIRONMENTAL DNA | SEQUENCE | ECOLOGY | PLANT TAXA | VEGETATION | DNA | Analysis | Grains | Taxonomy | Markers | Abundance | Species composition | Contamination | Genera | Gene sequencing | Matching | Relative abundance | Scaling | Pollen | Bioinformatics | Deoxyribonucleic acid--DNA | Scaling factors | Species richness
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
9. Full Text Environmental DNA for wildlife biology and biodiversity monitoring
by Bohmann, Kristine and Evans, Alice and Gilbert, M. Thomas P and Carvalho, Gary R and Creer, Simon and Knapp, Michael and Yu, Douglas W and de Bruyn, Mark
Trends in Ecology & Evolution, ISSN 0169-5347, 06/2014, Volume 29, Issue 6, pp. 358 - 367
Extraction and identification of DNA from an environmental sample has proven noteworthy recently in detecting and monitoring not only common species, but also... 
metabarcoding | biodiversity | second-generation sequencing | environmental DNA | metagenomics | monitoring | wildlife | Environmental DNA | Second-generation sequencing | Metabarcoding | Metagenomics | Wildlife | Biodiversity | Monitoring | SEDIMENTS | DIRT | ANCIENT DNA | DIAGNOSTIC PCR | ICE | IDENTIFICATION | EVOLUTIONARY BIOLOGY | AMPLIFICATION | DIET | GENETICS & HEREDITY | ECOLOGY | SAMPLES | PREY DNA | Animals | Plants - genetics | DNA - analysis | Ecosystem | Environmental Monitoring - methods | Metagenomics - methods | Animals, Wild - genetics | Bacteria - genetics | Fungi - genetics | Ecosystems | DNA | Biological diversity
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
10. Full Text Cascade dam impoundments restrain the trophic transfer efficiencies in benthic microbial food web
by Yang, Nan and Li, Yi and Zhang, Wenlong and Zhang, Huanjun and Lin, Li and Qian, Bao and Wang, Longfei and Niu, Lihua
Water Research, ISSN 0043-1354, 03/2020, Volume 170, p. 115351
Determination of the effects of cascade dams on benthic microbial ecosystem is essential for dam regulation and ecological function protection. However, no... 
Cascade dams | Multi-species | Ecological impacts | DNA metabarcoding | Microbial food web
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
11. Full Text EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences
by Barbera, Pierre and Kozlov, Alexey M and Czech, Lucas and Morel, Benoit and Darriba, Diego and Flouri, Tomáš and Stamatakis, Alexandros
Systematic Biology, ISSN 1063-5157, 03/2019, Volume 68, Issue 2, pp. 365 - 369
Abstract Next generation sequencing (NGS) technologies have led to a ubiquity of molecular sequence data. This data avalanche is particularly challenging in... 
Metabarcoding | EVOLUTIONARY BIOLOGY | metagenomics | phylogenetic placement | phylogenetics | microbiome | READS | Software for Systematics and Evolution
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
12. Full Text Illumina metabarcoding of a soil fungal community
by Schmidt, Philipp-André and Bálint, Miklós and Greshake, Bastian and Bandow, Cornelia and Römbke, Jörg and Schmitt, Imke
Soil Biology and Biochemistry, ISSN 0038-0717, 10/2013, Volume 65, pp. 128 - 132
Next generation metabarcoding is becoming an indispensable tool in fungal community ecology. Here we tested Illumina metabarcoding, a method that generates... 
Community richness | Metabarcoding | Next-generation sequencing | Illumina MiSeq | Soil fungi | PCR bias | Annealing temperature | Distance decay | INTRAGENOMIC VARIATION | PRIMER MISMATCH | SEQUENCES | ARBUSCULAR MYCORRHIZAL FUNGI | ASSEMBLAGES | DISTANCE-DECAY | FOREST | SOIL SCIENCE | PHYLLOSPHERE | PCR
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
13. Full Text Intermittent aeration strategy for azo dye biodegradation: A suitable alternative to conventional biological treatments?
by Oliveira, Jean M.S and de Lima e Silva, Mara R and Issa, Carina G and Corbi, Juliano J and Damianovic, Márcia H.R.Z and Foresti, Eugenio
Journal of Hazardous Materials, ISSN 0304-3894, 03/2020, Volume 385, p. 121558
Most solutions for biological treatment of azo dyes are based on conventional anaerobic-aerobic processes, but transition to full scale demands technology... 
Biodegradation | 16S rRNA gene metabarcoding | Aromatic amines | Factorial design | Azo dyes
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
14. Full Text What’s in the box? Authentication of Echinacea herbal products using DNA metabarcoding and HPTLC
by Raclariu, Ancuta Cristina and Ţebrencu, Carmen Elena and Ichim, Mihael Cristin and Ciupercǎ, Oana Teodora and Brysting, Anne Krag and de Boer, Hugo
Phytomedicine, ISSN 0944-7113, 05/2018, Volume 44, pp. 32 - 38
Differences in regulatory policies between countries as well as a lack of appropriate standardized methods for the authentication and quality control of herbal... 
Herbal products | Echinacea | Herbal pharmacovigilance | DNA metabarcoding | Authentication | HPTLC
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
15. Full Text eDNA metabarcoding as a promising conservation tool for monitoring fish diversity in a coastal wetland of the Pearl River Estuary compared to bottom trawling
by Zou, Keshu and Chen, Jianwei and Ruan, Huiting and Li, Min and Li, Zhenhai and Guo, Wenjie and Liu, Li
Science of the Total Environment, ISSN 0048-9697, 02/2020, Volume 702, p. 134704
The difficulty of censusing fish diversity hampers effective management and conservation in estuarine and coastal ecosystems, especially wetland ecosystems.... 
Environmental DNA | Metabarcoding | Fish diversity | Bottom trawling | Coastal wetland
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights