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Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 5/2011, Volume 108, Issue 19, pp. 8003 - 8008
Dengue virus (DENV) causes the major arboviral disease of the tropics, characterized in its severe forms by signs of hemorrhage and plasma leakage. DENV... 
Molecules | Lipoproteins | Secretion | Dengue | HDL lipoproteins | Lipids | Triglycerides | Dengue virus | Detergents | Fatty acids | Amphiphilic proteins | Dengue hemorrhagic fever | Arbovirus | amphiphilic proteins | CELLS | COMPLEMENT | INFECTIONS | RNA REPLICATION | FORM | GLYCOPROTEIN NS1 | MULTIDISCIPLINARY SCIENCES | arbovirus | dengue hemorrhagic fever | secretion | LIPID PROFILE | HEMORRHAGIC-FEVER | WEST-NILE | REVEALS | Cell Line | Protein Subunits | Recombinant Proteins - ultrastructure | Drosophila | Humans | Protein Multimerization | Dengue Virus - ultrastructure | Cercopithecus aethiops | Models, Molecular | Recombinant Proteins - chemistry | Dengue Virus - chemistry | Cryoelectron Microscopy | Lipoproteins, HDL - ultrastructure | Viral Nonstructural Proteins - chemistry | Animals | Computer Simulation | HEK293 Cells | Protein Structure, Quaternary | Lipoproteins, HDL - chemistry | Nuclear Magnetic Resonance, Biomolecular | Imaging, Three-Dimensional | Viral Nonstructural Proteins - ultrastructure | Vero Cells | Dengue viruses | Genetic aspects | Lipid metabolism | Viral Nonstructural Proteins/ultrastructure | Lipoproteins, HDL/ultrastructure | Life Sciences | Recombinant Proteins/chemistry | Lipoproteins, HDL/chemistry | Viral Nonstructural Proteins/chemistry | Dengue Virus/ultrastructure | Dengue Virus/chemistry | Recombinant Proteins/ultrastructure | Microbiology and Parasitology | Biological Sciences
Journal Article
PLoS Pathogens, ISSN 1553-7366, 04/2013, Volume 9, Issue 4, p. e1003256
Influenza A virus (IAV) triggers a contagious and potentially lethal respiratory disease. A protective IL-1 beta response is mediated by innate receptors in... 
INTERLEUKIN-1 | RNA | RESPIRATORY VIRAL-INFECTION | INNATE IMMUNE-RESPONSE | RIG-I | MICROBIOLOGY | INDUCTION | NS1 PROTEIN | ANTIVIRAL RESPONSES | INTERFERON | VIROLOGY | EPITHELIAL-CELLS | PARASITOLOGY | Epithelial Cells - metabolism | Inflammasomes - metabolism | NLR Family, Pyrin Domain-Containing 3 Protein | Humans | Caspase 1 - metabolism | Male | Tripartite Motif Proteins | Lung - virology | RNA Interference | Respiratory Mucosa - immunology | HEK293 Cells | Cytoskeletal Proteins - metabolism | Lung - metabolism | Toll-Like Receptor 3 - genetics | DEAD-box RNA Helicases - metabolism | Influenza A Virus, H1N1 Subtype - metabolism | Macrophages - immunology | DEAD Box Protein 58 | Respiratory Mucosa - cytology | Signal Transduction | Cells, Cultured | Ubiquitin-Protein Ligases - metabolism | Ferrets | Toll-Like Receptor 3 - metabolism | Transcription Factors - metabolism | Carrier Proteins - genetics | DEAD-box RNA Helicases - genetics | Animals | Carrier Proteins - metabolism | Interferon-beta - metabolism | Caspase 1 - genetics | CARD Signaling Adaptor Proteins | Viral Nonstructural Proteins - metabolism | Adaptor Proteins, Signal Transducing - metabolism | Cytoskeletal Proteins | Toll-Like Receptor 3 | Interferon-beta | Lung | Macrophages | Life Sciences | Influenza A Virus, H1N1 Subtype | Caspase 1 | Carrier Proteins | Viral Nonstructural Proteins | DEAD-box RNA Helicases | Inflammasomes | Respiratory Mucosa | Epithelial Cells | Virology | Ubiquitin-Protein Ligases | Microbiology and Parasitology | Adaptor Proteins, Signal Transducing | Transcription Factors | Proteins | Medical research | Experiments | Respiratory diseases | Influenza
Journal Article
Journal of Bioinformatics and Computational Biology, ISSN 0219-7200, 08/2018, Volume 16, Issue 4
Detection of protein-protein interactions (PPIs) plays a vital role in molecular biology. Particularly, pathogenic infections are caused by interactions of... 
negative sampling | interaction predictor | Host-pathogen interactions | protein-protein interactions | STAT2 | MATHEMATICAL & COMPUTATIONAL BIOLOGY | MACHINE | NS1
Journal Article
Journal Article
Cell Host & Microbe, ISSN 1931-3128, 11/2017, Volume 22, Issue 5, pp. 627 - 638.e7
TRIM25 is an E3 ubiquitin ligase that activates RIG-I to promote the antiviral interferon response. The NS1 protein from all strains of influenza A virus binds... 
nuclear TRIM25 | viral RNA synthesis | Influenza virus | viral ribonucleoproteins | CELLS | UBIQUITIN LIGASE | POLYMERASE | RIG-I | MICROBIOLOGY | NS1 PROTEINS | B VIRUS | A VIRUS | VIROLOGY | STRUCTURAL BASIS | NUCLEOPROTEIN | ANTIVIRAL ACTIVITY | PARASITOLOGY | Transcription, Genetic - drug effects | DEAD Box Protein 58 - metabolism | Humans | Influenza A Virus, H3N2 Subtype - metabolism | Ubiquitin-Protein Ligases - antagonists & inhibitors | Antiviral Agents - metabolism | RNA, Messenger - metabolism | Ubiquitination | SUMO-1 Protein - genetics | HEK293 Cells | Ribonucleoproteins - drug effects | Influenza A virus - pathogenicity | RNA, Viral - metabolism | A549 Cells | Cell Line | Influenza, Human - metabolism | Virus Replication - drug effects | Tripartite Motif Proteins - antagonists & inhibitors | Ubiquitin-Protein Ligases - metabolism | Models, Molecular | Tripartite Motif Proteins - genetics | Transcription Factors - antagonists & inhibitors | Transcription Factors - genetics | Host-Pathogen Interactions | Transcription Factors - metabolism | Carrier Proteins - genetics | Carrier Proteins - metabolism | Influenza A virus - metabolism | Ubiquitin-Protein Ligases - drug effects | Interferons - metabolism | Protein Binding | Viral Nonstructural Proteins - metabolism | SUMO-1 Protein - metabolism | Tripartite Motif Proteins - metabolism | RNA, Viral - drug effects | Ubiquitin-Protein Ligases - genetics | Viral Nonstructural Proteins - antagonists & inhibitors | Influenza viruses | Ubiquitin | Synthesis | Messenger RNA | RNA | Developmental biology | Ligases | Influenza | Interferon | Biological response modifiers
Journal Article
Cell, ISSN 0092-8674, 09/2018, Volume 174, Issue 6, pp. 1522 - 1536.e22
How transcription affects genome 3D organization is not well understood. We found that during influenza A (IAV) infection, rampant transcription rapidly... 
transcription elongation | cohesin | transcription | transcription termination | genome 3D structure | CTCF | readthrough transcription | chromatin compaction | NS1 | influenza A virus | PHASE-SEPARATION | NS1 PROTEIN | INFLUENZA-A VIRUS | CIS-REGULATORY ELEMENTS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENE-EXPRESSION | LOOP EXTRUSION | PRE-MESSENGER-RNAS | POLYMERASE-II | CHROMATIN ARCHITECTURE | MAMMALIAN GENOMES | CELL BIOLOGY | Chromatin - metabolism | Transcription, Genetic - drug effects | Humans | CCCTC-Binding Factor - metabolism | CCCTC-Binding Factor - chemistry | RNA Polymerase II - metabolism | Macrophages - virology | Piperidines - pharmacology | RNA Interference | Flavonoids - pharmacology | Influenza A Virus, H5N1 Subtype - metabolism | Nuclear Proteins - genetics | Binding Sites | Chromatin - chemistry | Proto-Oncogene Proteins - metabolism | Cell Line | Proto-Oncogene Proteins - antagonists & inhibitors | Chromosomal Proteins, Non-Histone - metabolism | Carrier Proteins - antagonists & inhibitors | Cell Cycle Proteins - metabolism | Viral Nonstructural Proteins - genetics | Nuclear Proteins - metabolism | Proto-Oncogene Proteins - genetics | Macrophages - cytology | Carrier Proteins - genetics | Macrophages - metabolism | Carrier Proteins - metabolism | Interferon-beta - pharmacology | Nuclear Proteins - antagonists & inhibitors | Protein Binding | RNA Polymerase II - genetics | Viral Nonstructural Proteins - metabolism | Genome, Human | RNA, Small Interfering - metabolism | Medical colleges | Chromatin | RNA | Microbiology | Genes | Genomics | Communicable diseases | Genomes | Genetic transcription | Anopheles | Influenza | Genetic aspects | Health aspects | read-through transcription
Journal Article
Journal of Cell Biology, ISSN 0021-9525, 2017, Volume 216, Issue 8, pp. 2283 - 2293
Journal Article
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 06/2011, Volume 286, Issue 22, pp. 20065 - 20077
Journal Article