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1. Full Text Engineered ribosomal RNA operon copy-number variants of E. coli reveal the evolutionary trade-offs shaping rRNA operon number
by Gyorfy, Zsuzsanna and Draskovits, Gabor and Vernyik, Viktor and Blattner, Frederick F and Gaal, Tamas and Posfai, Gyorgy
Nucleic acids research, ISSN 0305-1048, 2015, Volume 43, Issue 3, pp. 1783 - 1794
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Gene Dosage | Genetic Engineering | Escherichia coli - genetics | Operon | RNA, Ribosomal - genetics | Evolution, Molecular | Index Medicus | Molecular Biology
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2. Full Text Exploiting rRNA operon copy number to investigate bacterial reproductive strategies
by Roller, Benjamin R.K and Stoddard, Steven F and Schmidt, Thomas M and Univ. of Michigan, Ann Arbor, MI (United States)
Nature microbiology, ISSN 2058-5276, 09/2016, Volume 1, Issue 11, pp. 16160 - 16160
Carbon - metabolism | Bacteria - growth & development | Bacteria - metabolism | Genome, Bacterial | Protein Biosynthesis | Escherichia coli - genetics | RNA, Ribosomal | Gene Dosage | RNA, Bacterial | Escherichia coli - growth & development | Bacteria - genetics | rRNA Operon | Growth rate | Copy number | rRNA | Resource availability | Operons | Protein biosynthesis | Genomes | Chemotaxis | Reproduction | Efficiency | Bacteria | Comparative analysis | Community composition | Index Medicus | BASIC BIOLOGICAL SCIENCES
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3. Full Text Decreases in average bacterial community rRNA operon copy number during succession
by Nemergut, Diana R and Knelman, Joseph E and Ferrenberg, Scott and Bilinski, Teresa and Melbourne, Brett and Jiang, Lin and Violle, Cyrille and Darcy, John L and Prest, Tiffany and Schmidt, Steven K and Townsend, Alan R
The ISME Journal, ISSN 1751-7362, 05/2016, Volume 10, Issue 5, pp. 1147 - 1156
Environmental Sciences & Ecology | Ecology | Life Sciences & Biomedicine | Microbiology | Science & Technology | Sequence Analysis, RNA | Stochastic Processes | Operon | Soil Microbiology | rRNA Operon - genetics | Colorado | Ecosystem | RNA, Ribosomal, 16S - genetics | Soil | Gene Dosage | Phylogeny | Bacteria - genetics | Index Medicus | Original
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4. Full Text Rrndb: The ribosomal RNA operon copy number database
by Klappenbach, Joel A and Saxman, Paul R and Cole, James R and Schmidt, Thomas M
Nucleic acids research, ISSN 0305-1048, 01/2001, Volume 29, Issue 1, pp. 181 - 184
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Gene Dosage | Internet | Phylogeny | rRNA Operon - genetics | Genes, rRNA - genetics | Databases, Factual | Ribosomal RNA Operon Copy Number Database | rRNA 16S | Index Medicus
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5. Full Text The Copy Number of the spoVA2mob Operon Determines Pressure Resistance of Bacillus Endospores
by Li, Zhen and Schottroff, Felix and Simpson, David J and Gänzle, Michael G
Applied and environmental microbiology, ISSN 0099-2240, 08/2019, Volume 85, Issue 19
Heat resistance | Thermal resistance | Copy number | Sterilization | Operons | Genomes | Food processing | Pressure | Gene sequencing
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6. Full Text Plasmid copy number underlies adaptive mutability in bacteria
by Sano, Emiko and Maisnier-Patin, Sophie and Aboubechara, John Paul and Quiñones-Soto, Semarhy and Roth, John R
Genetics (Austin), ISSN 0016-6731, 11/2014, Volume 198, Issue 3, pp. 919 - 933
Life Sciences & Biomedicine | Genetics & Heredity | Science & Technology | Genes, Bacterial | Salmonella typhimurium - genetics | Salmonella typhimurium - growth & development | Adaptation, Biological - genetics | DNA Copy Number Variations - genetics | Gene Dosage | Tetracyclines - pharmacology | Mutation - genetics | Gene Amplification | Escherichia coli - genetics | Plasmids - genetics | Mutagenesis, Insertional | Adaptation, Biological - drug effects | Escherichia coli - growth & development | Gene Duplication - drug effects | Lac Operon | Genetic aspects | Research | Mutagenesis | Stress (Psychology) | Escherichia coli | Analysis | Bacteria | Mutation | Plasmids | Index Medicus | stress-induced mutagenesis | adaptive mutation | selection | mutation under selection | Investigations | gene amplification
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7. Full Text rRNA Operon Copy Number Reflects Ecological Strategies of Bacteria
by Joel A. Klappenbach and John M. Dunbar and Thomas M. Schmidt
Applied and Environmental Microbiology, ISSN 0099-2240, 04/2000, Volume 66, Issue 4, pp. 1328 - 1333
Life Sciences & Biomedicine | Microbiology | Biotechnology & Applied Microbiology | Science & Technology | Fundamental and applied biological sciences. Psychology | Microbial ecology | Soil | Biological and medical sciences | Animal, plant and microbial ecology | 2,4-Dichlorophenoxyacetic Acid - metabolism | Bacteria - metabolism | Soil Microbiology | Molecular Sequence Data | Gene Dosage | Phylogeny | Bacteria - genetics | Genes, rRNA - genetics | Bacteria - growth & development | Bacteria - isolation & purification | rRNA Operon - genetics | Ecosystem | Herbicides - metabolism | Bacteria | Genetic aspects | Research | RNA | Growth | Ribonucleic acid--RNA | Ribonucleic acid | Genes | Index Medicus | Space life sciences | Microbial Ecology
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8. Full Text Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates
by Gong, Jun and Dong, Jun and Liu, Xihan and Massana, Ramon
Protist, ISSN 1434-4610, 05/2013, Volume 164, Issue 3, pp. 369 - 379
rDNA | sequence polymorphism | copy number | quantitative PCR | Ciliophora | intragenomic variability | Intragenomic variability | RDNA | Sequence polymorphism | Copy number | Quantitative PCR | Life Sciences & Biomedicine | Microbiology | Science & Technology | DNA, Ribosomal - analysis | Operon | Molecular Sequence Data | Oligohymenophorea - genetics | Gene Dosage | Oligohymenophorea - cytology | Phylogeny | Sequence Analysis, DNA | Polymorphism, Genetic | Genetic Variation | Oligohymenophorea - classification | Ciliophora - classification | Sequence Alignment | Animals | Single-Cell Analysis - methods | Ciliophora - genetics | Ciliophora - cytology | Real-Time Polymerase Chain Reaction | DNA, Ribosomal - genetics | Genetic aspects | Chromosomes | Statistics | Analysis | Index Medicus
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9. Full Text Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters
by Wu, Linwei and Yang, Yunfeng and Chen, Si and Jason Shi, Zhou and Zhao, Mengxin and Zhu, Zhenwei and Yang, Sihang and Qu, Yuanyuan and Ma, Qiao and He, Zhili and Zhou, Jizhong and He, Qiang
The ISME Journal, ISSN 1751-7362, 12/2017, Volume 11, Issue 12, pp. 2874 - 2878
Environmental Sciences & Ecology | Ecology | Life Sciences & Biomedicine | Microbiology | Science & Technology | Anaerobiosis | Bacteria - metabolism | Phenotype | Gene Dosage | Bacteria - genetics | rRNA Operon | Availability | Microbial activity | Anaerobic microorganisms | Life history | Communities | Copy number | rRNA | Resource availability | Digesters | Anaerobic digestion | Taxa | Microorganisms | Community composition | Index Medicus | Short Communication
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10. Full Text Dynamics of coastal bacterial community average ribosomal RNA operon copy number reflect its response and sensitivity to ammonium and phosphate
by Dai, Tianjiao and Zhao, Yanan and Ning, Daliang and Huang, Bei and Mu, Qinglin and Yang, Yunfeng and Wen, Donghui
Environmental pollution (1987), ISSN 0269-7491, 05/2020, Volume 260, pp. 113971 - 113971
Nutrients loading | Sensitivity | Wastewater disposal | rRNA operon copy number | Bacterial community | Environmental Sciences & Ecology | Life Sciences & Biomedicine | Science & Technology | Environmental Sciences | Index Medicus
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11. Full Text Copy number of ArsR reporter plasmid determines its arsenite response and metal specificity
by Fang, Yun and Zhu, Chunjie and Chen, Xingjuan and Wang, Yan and Xu, Meiying and Sun, Guoping and Guo, Jun and Yoo, Jinnon and Tie, Cuijuan and Jiang, Xin and Li, Xianqiang
Applied microbiology and biotechnology, ISSN 0175-7598, 7/2018, Volume 102, Issue 13, pp. 5753 - 5761
Life Sciences | Biotechnology | pLHPars9 and pLLPars9 plasmid | Microbiology | Microbial Genetics and Genomics | Metal specificity | Biosensors | ArsR | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Arsenites - metabolism | Promoter Regions, Genetic | Metals - metabolism | Bacterial Proteins - genetics | Biosensing Techniques | Plasmids - genetics | Trans-Activators - genetics | Escherichia coli Proteins - genetics | Gene Dosage | Gene Expression Regulation, Bacterial | Genes, Reporter | Arsenic | Plasmids | Analysis | Luciferase | Escherichia coli | Genetic aspects | Binding | Transformation | Sequences | Transcription | Nucleotide sequence | Copy number | Metals | Free form | Environmental changes | Reporter gene | E coli | Arsenite | Deoxyribonucleic acid--DNA | Stibnite | Index Medicus
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