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IEEE Transactions on Parallel and Distributed Systems, ISSN 1045-9219, 04/2013, Volume 24, Issue 4, pp. 642 - 651
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 12/2018, Volume 46, Issue 22, pp. e134 - e134
Abstract The sequencing and comparative analysis of a collection of bacterial genomes from a single species or lineage of interest can lead to key insights... 
DISPERSAL | RECOMBINATION | RATES | TRANSMISSION | PERFORMANCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | MOLECULAR EVOLUTION | DISEASE | TIME-STRUCTURED DATA | HISTORY | Methods Online
Journal Article
Industrial & Engineering Chemistry Research, ISSN 0888-5885, 05/2018, Volume 57, Issue 21, pp. 7232 - 7244
Batch processes have been playing a significant role in modern industrial processes. However, even if the operating conditions are normal, the process... 
MULTIMODE PROCESSES | ENGINEERING, CHEMICAL | INDUSTRIAL-PROCESSES | STATISTICS PATTERN-ANALYSIS | FAULT-DIAGNOSIS | OPTIMALITY ASSESSMENT | ONLINE MONITORING STRATEGY | NONOPTIMAL CAUSE IDENTIFICATION | INDEPENDENT COMPONENT ANALYSIS | PENICILLIN PRODUCTION | PCA
Journal Article
Chemical Engineering Science, ISSN 0009-2509, 2015, Volume 123, pp. 170 - 190
Bayesian inference provides a natural framework for combining experimental data with prior knowledge to develop chemical kinetic models and quantify the... 
Online expectation maximization | Model selection | Markov chain Monte Carlo | Chemical kinetics | Adaptive MCMC | Bayesian inference
Journal Article
Journal of Parallel and Distributed Computing, ISSN 0743-7315, 03/2019, Volume 125, pp. 72 - 80
Inferring network structure has many applications ranging from viral marketing to privacy forensics, infection prevention and information feed ranking. In... 
Privacy | Network inference | Social networks | Cascading | Information propagation | Facebook | Maximum A posteriori | COMPUTER SCIENCE, THEORY & METHODS | SPREAD | ONLINE | WORMS
Journal Article
IEEE Transactions on Signal and Information Processing over Networks, ISSN 2373-776X, 09/2017, Volume 3, Issue 3, pp. 500 - 512
Understanding the process by which a contagion disseminates throughout a network is of great importance in many real-world applications. The required... 
Monte Carlo methods | Heuristic algorithms | Time series analysis | Diffusion processes | Information processing | Information diffusion processes | Inference algorithms | online Bayesian inference | Bayes methods | MCMC methods | Online Bayesian inference | TELECOMMUNICATIONS | ENGINEERING, ELECTRICAL & ELECTRONIC
Journal Article
Systematic Biology, ISSN 1063-5157, 05/2018, Volume 67, Issue 3, pp. 503 - 517
Abstract Phylogenetics, the inference of evolutionary trees from molecular sequence data such as DNA, is an enterprise that yields valuable evolutionary... 
Phylogenetics | Online inference | Sequential Monte Carlo | Subtree optimality | Effective sample size | Bayesian inference | effective sample size | PERFORMANCE | STABILITY | FILTERS | ACCURACY | EVOLUTIONARY BIOLOGY | sequential Monte Carlo | ALIGNMENT | subtree optimality | phylogenetics | online inference | REAL-TIME | Regular
Journal Article
IIE Transactions, ISSN 0740-817X, 07/2016, Volume 48, Issue 7, pp. 599 - 613
The detection of steady-state operation is critical in system/process performance assessment, optimization, fault detection, and process automation and... 
steady-state detection | average run length | multiple change-point model | Bayesian inference | Approximation | Mathematical analysis | Inference | Mathematical models | Computational efficiency | Online | Bayesian analysis | Optimization
Journal Article
BMC bioinformatics, ISSN 1471-2105, 12/2019, Volume 20, Issue 1, pp. 711 - 5
High-throughput technologies have brought tremendous changes to biological domains, and the resulting high-dimensional data has also posed enormous challenges... 
Visualization | Inference | Online tool | Bayesian network | R package
Journal Article
Systematic Biology, ISSN 1063-5157, 05/2018, Volume 67, Issue 3, pp. 490 - 502
Abstract Modern infectious disease outbreak surveillance produces continuous streams of sequence data which require phylogenetic analysis as data arrives.... 
Phylogenetics | Online inference | Sequential Monte Carlo | Bayesian inference | EVOLUTIONARY BIOLOGY | sequential Monte Carlo | EVOLUTION | phylogenetics | INFERENCE | online inference | Regular
Journal Article
Systematic biology, 11/2017
Modern infectious disease outbreak surveillance produces continuous streams of sequence data which require phylogenetic analysis as data arrives. Current... 
Journal Article
Journal Article