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1. Full Text Advanced biosensors for detection of pathogens related to livestock and poultry
by Vidic, Jasmina and Manzano, Marisa and Chang, Chung-Ming and Jaffrezic-Renault, Nicole
Veterinary research, ISSN 0928-4249, 02/2017, Volume 48, Issue 1, p. 11
Infectious animal diseases caused by pathogenic microorganisms such as bacteria and viruses threaten the health and well-being of wildlife, livestock, and... 
SALMONELLA-TYPHIMURIUM INFECTION | LABEL-FREE | ELECTROCHEMICAL DETECTION | INFLUENZA-A VIRUS | ESCHERICHIA-COLI | BLUETONGUE-VIRUS | MOUTH-DISEASE VIRUS | VETERINARY SCIENCES | STAPHYLOCOCCUS-AUREUS | SENSITIVE DETECTION | CLOSTRIDIUM-PERFRINGENS | Biosensing Techniques - veterinary | Campylobacter Infections - diagnosis | Bovine Respiratory Disease Complex - diagnosis | Campylobacter Infections - veterinary | Chickens - virology | Mycoplasma Infections - diagnosis | Foot-and-Mouth Disease - diagnosis | Cattle | Mycoplasma Infections - veterinary | Salmonella Infections, Animal - diagnosis | Livestock - virology | Female | Escherichia coli Infections - veterinary | Livestock - microbiology | Mastitis, Bovine - diagnosis | Clostridium Infections - diagnosis | Clostridium Infections - veterinary | Escherichia coli Infections - diagnosis | Orthomyxoviridae Infections - veterinary | Poultry Diseases - diagnosis | Chickens - microbiology | Orthomyxoviridae Infections - diagnosis | Animals | Coccidiosis - virology | Biosensing Techniques - methods | Bluetongue - diagnosis | Coccidiosis - diagnosis | Influenza in Birds - diagnosis | Viral antibodies | Pathogenic microorganisms | Analysis | Antibodies | Livestock | Research | Biosensors | Health aspects | Life Sciences | Review
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2. Full Text A Large, Population-Based Study of 2009 Pandemic Influenza A Virus Subtype H1N1 Infection Diagnosis During Pregnancy and Outcomes for Mothers and Neonates
by Craig Hansen and Sheila Desai and Christine Bredfeldt and Craig Cheetham and Mia Gallagher and De-Kun Li and Marsha A. Raebel and Karen Riedlinger and David K. Shay and Mark Thompson and Robert L. Davis
The Journal of Infectious Diseases, ISSN 0022-1899, 10/2012, Volume 206, Issue 8, pp. 1260 - 1268
Background. Pregnant women were at increased risk for serious outcomes of 2009 pandemic influenza A virus subtype H1N1 (influenza A[HlNl] pdm09) infection, but... 
Women | Pregnancy | Pandemics | Antivirals | Orthomyxoviridae | Viruses | Infections | Infants | Mothers | Operating rooms | A(H1N1) VIRUS | WOMEN | INFECTIOUS DISEASES | MICROBIOLOGY | DEATH | IMMUNOLOGY | OSELTAMIVIR | Influenza, Human - pathology | Pregnancy Complications, Infectious - virology | Humans | Hospitalization - statistics & numerical data | Male | Treatment Outcome | Antiviral Agents - administration & dosage | Pregnancy Complications, Infectious - pathology | Young Adult | Influenza A Virus, H1N1 Subtype - isolation & purification | Adolescent | Pregnancy Complications, Infectious - drug therapy | Adult | Female | Influenza, Human - diagnosis | Influenza, Human - virology | Influenza, Human - drug therapy | Infant, Newborn | Pregnancy Complications, Infectious - diagnosis | Infants (Newborn) | Research | Pregnant women | Health aspects | Patient outcomes | Swine influenza
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3. Full Text Influenza A Virus Infections in Swine
: Pathogenesis and Diagnosis
by Janke, B. H
Veterinary Pathology, ISSN 0300-9858, 3/2014, Volume 51, Issue 2, pp. 410 - 426
Influenza has been recognized as a respiratory disease in swine since its first appearance concurrent with the 1918 “Spanish flu” human pandemic. All influenza... 
swine | pathogenesis | receptors | virulence | hemagglutinin | polymerases | cross-species infection | influenza virus | apoptosis | diagnosis | cytokines | AIRWAY EPITHELIAL-CELLS | UNITED-STATES | 1918 PANDEMIC VIRUS | H3N2 VIRUSES | HOST-RANGE | LOWER RESPIRATORY-TRACT | PATHOLOGY | H5N1 AVIAN INFLUENZA | ENDOTHELIAL-CELLS | ALVEOLAR MACROPHAGES | VETERINARY SCIENCES | PB1-F2 PROTEIN | Orthomyxoviridae Infections - diagnosis | Swine Diseases - diagnosis | Animals | Virus Replication | Swine | Swine Diseases - virology | Orthomyxoviridae Infections - pathology | Influenza A virus - pathogenicity | Swine Diseases - pathology | Influenza A virus - immunology | Influenza A virus - isolation & purification | Orthomyxoviridae Infections - virology
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4. Full Text Whole Blood Gene Expression Profiles to Assess Pathogenesis and Disease Severity in Infants with Respiratory Syncytial Virus Infection
by Mejias, Asuncion and Dimo, Blerta and Suarez, Nicolas M and Garcia, Carla and Suarez-Arrabal, M. Carmen and Jartti, Tuomas and Blankenship, Derek and Jordan-Villegas, Alejandro and Ardura, Monica I and Xu, Zhaohui and Banchereau, Jacques and Chaussabel, Damien and Ramilo, Octavio
PLoS Medicine, ISSN 1549-1277, 11/2013, Volume 10, Issue 11, p. e1001549
Background: Respiratory syncytial virus (RSV) is the leading cause of viral lower respiratory tract infection (LRTI) and hospitalization in infants. Mostly... 
BRONCHIOLITIS | TRIAL | CELLS | RESPONSES | MEDICINE, GENERAL & INTERNAL | CONJUGATE | INFLUENZA-VIRUS | PNEUMONIA | SIGNATURE | CHILDREN | Prospective Studies | Oxygen - therapeutic use | United States | Humans | Respiratory Syncytial Viruses - immunology | Transcriptome | Infant | Male | Pneumonia, Viral - blood | Respiratory Syncytial Virus Infections - immunology | Case-Control Studies | Orthomyxoviridae - immunology | Microarray Analysis | Respiratory Syncytial Virus Infections - blood | Female | Rhinovirus - immunology | Respiratory Syncytial Virus Infections - virology | RNA - metabolism | Length of Stay | Severity of Illness Index | Diagnosis, Differential | Biomarkers - blood | Pneumonia, Viral - immunology | Respiratory Syncytial Virus Infections - diagnosis | Finland | Pneumonia, Viral - diagnosis | Qualitative Research | Pneumonia, Viral - virology | Respiratory syncytial virus infection | Physiological aspects | Host-parasite relationships | Genetic aspects | Infants | Research | Gene expression | Health aspects | Studies | Immunology | Pathogenesis | Biomarkers | Hospitalization | Infections | Age | Blood | Viral infections | Immune system | Children & youth
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5. Full Text Evaluation of four commercial multiplex molecular tests for the diagnosis of acute respiratory infections
by Salez, Nicolas and Vabret, Astrid and Leruez-Ville, Marianne and Andreoletti, Laurent and Carrat, Fabrice and Renois, Fanny and De Lamballerie, Xavier
PLoS ONE, ISSN 1932-6203, 06/2015, Volume 10, Issue 6, p. e0130378
Acute Respiratory Infections (ARIs) are responsible for considerable morbidity and mortality worldwide. Documentation of respiratory specimens can help for an... 
REAL-TIME PCR | PERFORMANCE | MULTIDISCIPLINARY SCIENCES | ACID AMPLIFICATION TESTS | VIRAL PANEL FAST | FILMARRAY RP | FAST ASSAY | RVP | VIRUSES | PATHOGENS | Humans | Middle Aged | Reagent Kits, Diagnostic - standards | Child, Preschool | Infant | Rhinovirus - isolation & purification | Parechovirus - isolation & purification | Respirovirus - genetics | Gram-Negative Bacteria - isolation & purification | Gram-Positive Bacteria - genetics | Respiratory Tract Infections - microbiology | Adenoviridae - isolation & purification | Human bocavirus - genetics | Enterovirus - genetics | Adenoviridae - genetics | Adult | Gram-Negative Bacteria - genetics | Respiratory Tract Infections - virology | Child | Coronavirus - isolation & purification | Cytomegalovirus - genetics | Cytomegalovirus - isolation & purification | Acute Disease | Parechovirus - genetics | Respiratory Syncytial Viruses - isolation & purification | Enterovirus - isolation & purification | Human bocavirus - isolation & purification | Respiratory Tract Infections - diagnosis | Multiplex Polymerase Chain Reaction - standards | Respiratory Syncytial Viruses - genetics | Adolescent | Orthomyxoviridae - genetics | Coronavirus - genetics | Gram-Positive Bacteria - isolation & purification | Respirovirus - isolation & purification | Aged | Orthomyxoviridae - isolation & purification | Rhinovirus - genetics | Comparative analysis | Health aspects | Mortality | Influenza | Lung diseases | Multiplexing | Pathogens | Microbiology | Laboratories | Health risks | Life assessment | Viruses | Infections | Nucleic acids | Medical diagnosis | Disease control | Morbidity | Molecular chains | Virology | Hospitals | Respiratory diseases | Bacteria | Influenza A | Diagnostic systems | Diagnosis | Public health | Viral infections | Life Sciences | Human health and pathology | Infectious diseases | Biochemistry, Molecular Biology
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6. Full Text Comparison of the Luminex xTAG Respiratory Viral Panel with In-House Nucleic Acid Amplification Tests for Diagnosis of Respiratory Virus Infections
by Kanti Pabbaraju and Kara L. Tokaryk and Sallene Wong and Julie D. Fox
Journal of Clinical Microbiology, ISSN 0095-1137, 09/2008, Volume 46, Issue 9, pp. 3056 - 3062
Article Usage Stats Services JCM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
REAL-TIME PCR | INFLUENZA-A | BASIC KIT | TRACT SAMPLES | NASBA | MICROBIOLOGY | RVP ASSAY | IDENTIFICATION | PATHOGENS | Oligonucleotide Array Sequence Analysis | Humans | Middle Aged | Child, Preschool | Infant | Orthomyxoviridae | Respirovirus | Respiratory Tract Infections - diagnosis | Nucleic Acid Amplification Techniques | Young Adult | Respiratory Syncytial Viruses | Sensitivity and Specificity | Adolescent | Aged, 80 and over | Adult | Aged | Respiratory Tract Infections - virology | Child | Virology
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7. Full Text Increased Detection of Respiratory Syncytial Virus, Influenza Viruses, Parainfluenza Viruses, and Adenoviruses with Real-Time PCR in Samples from Patients with Respiratory Symptoms
by Alma C. van de Pol and Anton M. van Loon and Tom F. W. Wolfs and Nicolaas J. G. Jansen and Monique Nijhuis and Els Klein Breteler and Rob Schuurman and John W. A. Rossen
Journal of Clinical Microbiology, ISSN 0095-1137, 07/2007, Volume 45, Issue 7, pp. 2260 - 2262
Article Usage Stats Services JCM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
QUANTITATIVE PCR | ADULTS | DIAGNOSIS | INFECTIONS | MICROBIOLOGY | Adenoviridae Infections - virology | Humans | Respiratory Syncytial Viruses - isolation & purification | Paramyxoviridae Infections - diagnosis | Adenoviridae Infections - diagnosis | Respiratory Syncytial Virus Infections - diagnosis | Polymerase Chain Reaction - methods | Orthomyxoviridae Infections - diagnosis | Adenoviridae - isolation & purification | Paramyxoviridae Infections - virology | Adult | Respiratory Syncytial Virus Infections - virology | Child | Orthomyxoviridae - isolation & purification | Orthomyxoviridae Infections - virology | Paramyxoviridae - isolation & purification | Virology
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8. Full Text Infectious agents associated with respiratory diseases in 125 farrow-to-finish pig herds: A cross-sectional study
by Fablet, C and Marois-Créhan, C and Simon, G and Grasland, B and Jestin, A and Kobisch, M and Madec, F and Rose, N
Veterinary Microbiology, ISSN 0378-1135, 05/2012, Volume 157, Issue 1-2, pp. 152 - 163
A study was carried out in 125 farrow-to-finish pig herds to assess the relationships between pathogens involved in respiratory disorders and to relate these... 
Pig respiratory diseases | Porcine reproductive and respiratory syndrome virus | Porcine circovirus type 2 | Swine influenza viruses | Mycoplasma hyopneumoniae | Actinobacillus pleuropneumoniae | PORCINE CIRCOVIRUS TYPE-2 | COMPLEX | RISK-FACTORS | MYCOPLASMA-HYOPNEUMONIAE INFECTION | SLAUGHTER | VACCINATION | MICROBIOLOGY | PNEUMONIA | DUAL INFECTION | SWINE INFLUENZA-VIRUS | EUROPEAN COUNTRIES | VETERINARY SCIENCES | Circoviridae Infections - veterinary | Swine Diseases - virology | Circoviridae Infections - diagnosis | Porcine Reproductive and Respiratory Syndrome - diagnosis | Antibodies, Viral - blood | Swine Diseases - epidemiology | Pleuropneumonia - epidemiology | Influenza A Virus, H1N1 Subtype - isolation & purification | Swine | Mycoplasma hyopneumoniae - isolation & purification | Pleurisy - virology | Antibodies, Bacterial - blood | Influenza A Virus, H1N2 Subtype | Porcine respiratory and reproductive syndrome virus - isolation & purification | Pleurisy - epidemiology | Porcine Reproductive and Respiratory Syndrome - epidemiology | Actinobacillus pleuropneumoniae - isolation & purification | Actinobacillus Infections - epidemiology | France - epidemiology | Cross-Sectional Studies | Orthomyxoviridae Infections - veterinary | Pleuropneumonia - microbiology | Actinobacillus Infections - veterinary | Sus scrofa - virology | Sus scrofa - microbiology | Pleurisy - microbiology | Orthomyxoviridae Infections - diagnosis | Orthomyxoviridae Infections - epidemiology | Circovirus - isolation & purification | Swine Diseases - diagnosis | Animals | Pleuropneumonia - veterinary | Circoviridae Infections - epidemiology | Actinobacillus Infections - diagnosis | Pleuropneumonia - virology | Pleurisy - veterinary | Swine Diseases - microbiology | Viral antibodies | Medical research | Pneumonia | Lung diseases | Influenza | Bacterial pneumonia | Antibodies | Medicine, Experimental | Respiratory tract diseases
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9. A novel immune biomarker IFI27 discriminates between influenza and bacteria in patients with suspected respiratory infection
by Tang, Benjamin M and Shojaei, Maryam and Parnell, Grant P and Huang, Stephen and Nalos, Marek and Teoh, Sally and O'Connor, Kate and Schibeci, Stephen and Phu, Amy L and Kumar, Anand and Ho, John and Meyers, Adrienne F A and Keynan, Yoav and Ball, Terry and Pisipati, Amarnath and Kumar, Aseem and Moore, Elizabeth and Eisen, Damon and Lai, Kevin and Gillett, Mark and Geffers, Robert and Luo, Hao and Gul, Fahad and Schreiber, Jens and Riedel, Sandra and Booth, David and McLean, Anthony and Schughart, Klaus
The European respiratory journal, ISSN 0903-1936, 06/2017, Volume 49, Issue 6, pp. 1602098 - 1602098
Host response biomarkers can accurately distinguish between influenza and bacterial infection. However, published biomarkers require the measurement of many... 
PLASMACYTOID DENDRITIC CELLS | RESPONSES | RECOGNITION | RESPIRATORY SYSTEM | SINGLE-STRANDED RNA | ADULTS | EXPRESSION | SIGNATURE | VIRUSES | CHILDREN | Predictive Value of Tests | Diagnosis, Differential | Gene Expression | Membrane Proteins - genetics | Humans | Middle Aged | Biomarkers - analysis | Bacterial Physiological Phenomena | Male | Respiratory Tract Infections - diagnosis | Respiratory Tract Infections - genetics | Membrane Proteins - analysis | Respiratory Tract Infections - microbiology | Bacterial Infections - genetics | Host-Pathogen Interactions - genetics | Influenza, Human - genetics | Female | Influenza, Human - diagnosis | Bacterial Infections - diagnosis | Interferons - genetics | Respiratory Tract Infections - virology | Orthomyxoviridae - physiology | Accuracy | Bacterial infections | TLR7 protein | Genomic analysis | Dendritic cells | Antigen-presenting cells | Influenza | Toll-like receptors | Biomarkers | Bacteria | T cell receptors | Infections
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10. Full Text Detection of tilapia lake virus in clinical samples by culturing and nested reverse transcription-PCR
by Tsofack, Japhette Esther Kembou and Zamostiano, Rachel and Watted, Salsabeel and Berkowitz, Asaf and Rosenbluth, Ezra and Mishra, Nischay and Briese, Thomas and Lipkin, W. Ian and Kabuusu, Richard M and Ferguson, Hugh and Del Pozo, Jorge and Eldar, Avi and Bacharach, Eran
Journal of Clinical Microbiology, ISSN 0095-1137, 03/2017, Volume 55, Issue 3, pp. 759 - 767
Tilapia are an important group of farmed fish that serve as a significant protein source worldwide. In recent years, substantial mortality of wild tilapia has... 
Virus | Tilv | Tilapia | Diagnosis | PCR | tilapia | SYNCYTIAL HEPATITIS | OREOCHROMIS-NILOTICUS L | TiLV | FISH | diagnosis | MICROBIOLOGY | INFECTION | OUTBREAK | virus | Cell Line | Colombia | Orthomyxoviridae Infections - veterinary | RNA, Viral - analysis | Polymerase Chain Reaction - methods | Orthomyxoviridae Infections - diagnosis | Tilapia - virology | Animals | Fish Diseases - virology | RNA, Viral - genetics | Reverse Transcriptase Polymerase Chain Reaction - methods | Fish Diseases - diagnosis | Orthomyxoviridae - isolation & purification | Orthomyxoviridae Infections - virology | Virus Cultivation - methods | Clinical Veterinary Microbiology
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11. Full Text Superiority of Reverse-Transcription Polymerase Chain Reaction to Conventional Viral Culture in the Diagnosis of Acute Respiratory Tract Infections in Children
by Geoffrey A. Weinberg and Dean D. Erdman and Kathryn M. Edwards and Caroline B. Hall and Frances J. Walker and Marie R. Griffin and Benjamin Schwartz and New Vaccine Surveillance Network S and New Vaccine Surveillance Network Study Group and the New Vaccine Surveillance Network Study Group
The Journal of Infectious Diseases, ISSN 0022-1899, 2/2004, Volume 189, Issue 4, pp. 706 - 710
We compared the rates of detection of respiratory viruses by reverse-transcription polymerase chain reaction (RT-PCR) and by conventional viral culture in 668... 
Human respiratory syncytial virus | Polymerase chain reaction | Respiratory tract infections | Pediatrics | Cell culture techniques | Reverse transcriptase polymerase chain reaction | Vaccination | Viruses | Orthomyxoviridae | Diseases | REPLACE CELL-CULTURE | INFECTIOUS DISEASES | INFLUENZA | MOLECULAR TECHNIQUES | PARAINFLUENZA VIRUS | ILLNESS | HOSPITALIZATIONS | SYNCYTIAL VIRUS | VIROLOGY LABORATORIES | YOUNG-CHILDREN | PCR | Acute Disease | Reproducibility of Results | Humans | Child, Preschool | Infant | Paramyxoviridae Infections - diagnosis | Virology - methods | Respiratory Tract Infections - diagnosis | Respiratory Syncytial Virus Infections - diagnosis | Reverse Transcriptase Polymerase Chain Reaction - standards | Time Factors | Reverse Transcriptase Polymerase Chain Reaction - methods | Influenza, Human - diagnosis | Respiratory Tract Infections - virology | Child
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12. Diagnosis of equine influenza
by Rash, Adam
Veterinary Record, ISSN 0042-4900, 07/2017, Volume 181, Issue 5, pp. 113 - 114
During the summer months, there will be increased movement and, therefore, increased mixing of the horse population, leading to a higher risk of disease... 
VETERINARY SCIENCES | Horse Diseases - diagnosis | Orthomyxoviridae Infections - diagnosis | Sentinel Surveillance - veterinary | Animals | Orthomyxoviridae Infections - veterinary | Horses | Diagnostic Tests, Routine - veterinary | Horse Diseases - virology | Orthomyxoviridae Infections - virology | United Kingdom - epidemiology | Influenza A Virus, H3N8 Subtype - isolation & purification
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13. Full Text Clinical utility of on-demand multiplex respiratory pathogen testing among adult outpatients
by Green, Daniel A and Hitoaliaj, Letiana and Kotansky, Brian and Campbell, Sheldon M and Peaper, David R
Journal of Clinical Microbiology, ISSN 0095-1137, 12/2016, Volume 54, Issue 12, pp. 2950 - 2955
Multiplex tests for respiratory tract infections include up to 20 targets for common pathogens, predominantly viruses. A specific therapeutic intervention is... 
BRONCHIOLITIS | IMPACT | RISK-FACTORS | MANAGEMENT | HUMAN METAPNEUMOVIRUS | TRACT INFECTION | MICROBIOLOGY | LENGTH-OF-STAY | SYNCYTIAL VIRUS | RAPID DIAGNOSIS | CHILDREN | Asthma - diagnosis | Pulmonary Disease, Chronic Obstructive - diagnosis | Ambulatory Care Facilities - statistics & numerical data | Oseltamivir - therapeutic use | Humans | Middle Aged | Male | Emergency Service, Hospital - statistics & numerical data | Respiratory Tract Infections - diagnosis | Anti-Bacterial Agents - therapeutic use | Practice Patterns, Physicians' - statistics & numerical data | Aged, 80 and over | Adult | Female | Influenza, Human - diagnosis | Aged | Retrospective Studies | Influenza, Human - drug therapy | Respiratory Tract Infections - virology | Orthomyxoviridae - isolation & purification | Virology
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