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1. Full Text Structures and target recognition modes of PDZ domains: Recurring themes and emerging pictures
by Ye, Fei and Zhang, Mingjie
Biochemical journal, ISSN 0264-6021, 10/2013, Volume 455, Issue 1, pp. 1 - 14
Protein assembly | PDZ domain | PDZ supramodule | Scaffold protein | Extended PDZ domain | Tandem repeat | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Protein Structure, Secondary | Humans | Models, Molecular | Receptors, Cell Surface - metabolism | Tandem Repeat Sequences | Protein Folding | Protein Transport | Animals | Ion Channels - metabolism | PDZ Domains | Protein Binding | Receptors, Cell Surface - chemistry | Binding Sites | Ion Channels - chemistry | Index Medicus
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2. Full Text SNX27, a protein involved in down syndrome, regulates GPR17 trafficking and oligodendrocyte differentiation
by Meraviglia, Veronica and Ulivi, Alessandro Francesco and Boccazzi, Marta and Valenza, Fabiola and Fratangeli, Alessandra and Passafaro, Maria and Lecca, Davide and Stagni, Fiorenza and Giacomini, Andrea and Bartesaghi, Renata and Abbracchio, Maria P and Ceruti, Stefania and Rosa, Patrizia
Glia, ISSN 0894-1491, 08/2016, Volume 64, Issue 8, pp. 1437 - 1460
myelination | receptor endocytosis | PDZ‐domain | PDZ‐binding motif | Receptor endocytosis | Myelination | PDZ-domain | PDZ-binding motif | Neurosciences | Neurosciences & Neurology | Life Sciences & Biomedicine | Science & Technology | Cell Line | Down Syndrome - pathology | Oligodendroglia - metabolism | Sorting Nexins - genetics | Sorting Nexins - deficiency | Down Syndrome - metabolism | Receptors, G-Protein-Coupled - metabolism | Humans | Mice, Inbred C57BL | Mice, Transgenic | Endocytosis - physiology | Brain - metabolism | Nerve Tissue Proteins - metabolism | Oligodendroglia - pathology | Animals | Cell Membrane - pathology | HEK293 Cells | Brain - pathology | Biological Transport - physiology | Cell Membrane - metabolism | Mice | Sorting Nexins - metabolism | Cell Differentiation - physiology | Disease Models, Animal | G proteins | Down syndrome | Analysis | Membrane proteins | Proteins | Rodents | Index Medicus
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3. Full Text Lock and chop: A novel method for the generation of a PICK1 PDZ domain and piperidine‐based inhibitor co‐crystal structure
by Marcotte, Douglas J and Hus, Jean‐Christophe and Banos, Charles C and Wildes, Craig and Arduini, Robert and Bergeron, Chris and Hession, Catherine A and Baker, Darren P and Lin, Edward and Guckian, Kevin M and Dunah, Anthone W and Silvian, Laura F
Protein science, ISSN 0961-8368, 03/2018, Volume 27, Issue 3, pp. 672 - 680
class II PDZ binding motif | PDZ domain inhibitor cocrystallization | PICK1 PDZ domain crystal structure | proteolysis | PDZ domain small molecule inhibitors | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Small Molecule Libraries - pharmacology | Humans | Molecular Conformation | Models, Molecular | Nuclear Proteins - metabolism | Structure-Activity Relationship | Nuclear Proteins - chemistry | Crystallography | Small Molecule Libraries - chemistry | Carrier Proteins - metabolism | Protein Binding - drug effects | Drug Design | PDZ Domains | Carrier Proteins - chemistry | Binding Sites - drug effects | Receptors, AMPA - metabolism | Nervous system diseases | Hydroxides | Proteolysis | Analysis | Crystals | Fluorescence | Structure | Alzheimer's disease | Methods | Protein-protein interactions | Fluorescence polarization | Neurodegenerative diseases | Cognitive ability | Drug development | α-Amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptors | Membrane proteins | Neurological diseases | Proteins | Receptors | Endocytosis | Inhibitors | α-Amino-3-hydroxy-5-methyl-4-isoxazole propionic acid | Internalization | Piperidine | Protein structure | Crystal structure | Index Medicus
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4. Full Text Interactions with PDZ proteins diversify voltage‐gated calcium channel signaling
by Wang, Shiyi and Cortes, Constanza J
Journal of neuroscience research, ISSN 0360-4012, 01/2021, Volume 99, Issue 1, pp. 332 - 348
PDZ‐domain containing proteins | PDZ (postsynaptic density‐95 | and zona occludens | Drosophila discs‐large | voltage‐gated Ca2+ channels | Drosophila discs-large | PDZ (postsynaptic density-95 | channels | voltage-gated Ca | PDZ-domain containing proteins | Neurosciences | Neurosciences & Neurology | Life Sciences & Biomedicine | Science & Technology | Calcium channels | Regulations | Electric potential | Calcium | Spine | Intracellular signalling | Density | Cell surface | Channels | Depolarization | Calcium signalling | Second messengers | Proteins | Dendritic spines | Synaptic transmission | Voltage | Localization | Neurotransmitter release | Channel gating | Calcium channels (voltage-gated) | Excitability | Signaling | Neurotransmitters | Scaffolding | Morphology | Postsynaptic density | Calcium ions | Index Medicus
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5. Full Text Proteome‐wide analysis of phospho‐regulated PDZ domain interactions
by Sundell, Gustav N and Arnold, Roland and Ali, Muhammad and Naksukpaiboon, Piangfan and Orts, Julien and Güntert, Peter and Chi, Celestine N and Ivarsson, Ylva
Molecular systems biology, ISSN 1744-4292, 08/2018, Volume 14, Issue 8, pp. e8129 - n/a
protein–protein interaction | Scribble | PDZ domain | phage display | phosphorylation | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Oligonucleotides - genetics | Zonula Occludens-1 Protein - genetics | Phosphorylation | Protein Binding - genetics | Proteome - genetics | Humans | Peptides - genetics | Disks Large Homolog 4 Protein - genetics | Amino Acid Sequence - genetics | Peptide Library | Protein Interaction Mapping | PDZ Domains - genetics | Protein Interaction Maps - genetics | Ligands | Binding Sites | Regulations | Nuclear magnetic resonance--NMR | Peptides | Phages | Oligonucleotides | Switches | Titration calorimetry | Amino acids | Binders | Switching | Proteins | Phage display | Calorimetry | Titration | Proteomes | Protein interaction | Thermophoresis | Index Medicus
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6. Full Text Specific Targeting of Pro-Death NMDA Receptor Signals with Differing Reliance on the NR2B PDZ Ligand
by Soriano, Francesc X and Martel, Marc-Andre and Papadia, Sofia and Vaslin, Anne and Baxter, Paul and Rickman, Colin and Forder, Joan and Tymianski, Michael and Duncan, Rory and Aarts, Michelle and Clarke, Peter G. H and Wyllie, David J. A and Hardingham, Giles E
The Journal of neuroscience, ISSN 0270-6474, 10/2008, Volume 28, Issue 42, pp. 10696 - 10710
PDZ domains | Neuroprotection | Signal transduction | Mitochondria | Stroke | Calcium | Protein kinase | Nitric oxide | Neuronal death | NMDA receptor | Neurosciences | Neurosciences & Neurology | Life Sciences & Biomedicine | Science & Technology | Gene Targeting - methods | Cells, Cultured | Receptors, N-Methyl-D-Aspartate - metabolism | Rats | Male | Rats, Sprague-Dawley | Receptors, N-Methyl-D-Aspartate - genetics | Excitatory Postsynaptic Potentials - physiology | Animals | Cell Death - physiology | Ligands | Signal Transduction - physiology | PDZ Domains - physiology | Index Medicus | nitric oxide | calcium | signal transduction | neuronal death | mitochondria | neuroprotection | stroke | protein kinase
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