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Fungal Genetics and Biology, ISSN 1087-1845, 05/2017, Volume 102, pp. 4 - 21
[Display omitted] •First genome-wide transcriptional response in fungal mixed species straw cultures.•In mixed cultures, rRNA abundance was used to predict... 
Competition | Dual RNA-seq | Lignocellulose | Aspergillus niger | Mixed cultures | Trichoderma reesei | Penicillium chrysogenum | ASPERGILLUS-NIGER | CARBON STARVATION | SECONDARY METABOLISM | TRICHODERMA-REESEI | WHEAT-STRAW | BIOMASS-DEGRADING ENZYMES | SYSTEMS-ANALYSIS | GENETICS & HEREDITY | GENE-EXPRESSION | PENICILLIUM-CHRYSOGENUM | NIDULANS | MYCOLOGY | Hydrolases - metabolism | Hydrolases - genetics | Coculture Techniques | Carbohydrate Metabolism | Transcriptome | Aspergillus niger - enzymology | Ascomycota - enzymology | Trichoderma - genetics | Biomass | Fungal Proteins - genetics | Trichoderma - enzymology | Penicillium chrysogenum - genetics | Antibiosis | Lignin - metabolism | Sequence Analysis, RNA | Aspergillus niger - genetics | Ascomycota - genetics | Penicillium chrysogenum - drug effects | Penicillium chrysogenum - enzymology | Fungal Proteins - metabolism | Fungi | RNA | Genetic transcription | Metabolites | Analysis | Genomics | FPKM, uniquely mapped Fragments Per Kilobase of gene model per Million uniquely mapped fragments | MWCO, molecular weight cut-off | Pc, Penicillium chrysogenum | pNP-α-Glc, 4-Nitrophenyl-α-d-glucopyranoside | CAZyme, carbohydrate active enzyme | padj, p value from DESeq analysis with adjustment for multiple hypothesis testing | pNP-β-Glc, 4-Nitrophenyl-β-d-glucopyranoside | CAZy, carbohydrate active enzyme or protein, as found in the CAZy database | An, Aspergillus niger | pNP-Xyl, 4-Nitrophenyl-β-d-xylopyranoside | pNP-Cel, 4-Nitrophenyl-β-d-cellobioside | pNP-Ara, 4-Nitrophenyl-α-l-arabinofuranoside | Tr, Trichoderma reesei
Journal Article
Journal Article
Microbial Cell Factories, ISSN 1475-2859, 09/2017, Volume 16, Issue 1, pp. 166 - 12
Background: Xylan, the major constituent of hemicellulose, is composed of beta-(1,4)-linked xylopyranosyl units that for the backbone, with side chains formed... 
Acetyl xylan esterase | Hydrolysis | Synergy | α-l-Arabinofuranosidase | Penicillium chrysogenum | BIOCHEMICAL-CHARACTERIZATION | ESTERASE-ACTIVITIES | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | XYLANOLYTIC ENZYME | CORN STOVER | PURIFICATION | alpha-L-Arabinofuranosidase | PICHIA-PASTORIS | DEGRADATION | L-ARABINOFURANOSIDASE | EXPRESSION | CELLULOSE | Fungal Proteins - chemistry | Acetylesterase - chemistry | Glycoside Hydrolases - genetics | Enzyme Stability | Substrate Specificity | Fungal Proteins - genetics | Hot Temperature | Penicillium chrysogenum - genetics | Acetylesterase - genetics | Penicillium chrysogenum - metabolism | Lignin - metabolism | Penicillium chrysogenum - chemistry | Acetylesterase - metabolism | Glycoside Hydrolases - chemistry | Glycoside Hydrolases - metabolism | Penicillium chrysogenum - enzymology | Fungal Proteins - metabolism | Hydrogen-Ion Concentration | Chemical properties | Research | Comparative analysis | Temperature | Hemicellulose | Enzyme activity | Yeast | L-Arabinofuranosidase | Xylan | Chains | Glycosyl hydrolase | Amino acids | Mannose | Esterases | Biochemistry | Catalytic activity | pH effects | Proteins | Arabinose | Lignocellulose | Xylanase | Hydrogen ions | Esterase | Enzymatic activity | Catalysis | Arabinofuranosidase | Recombinant | Carbohydrates | Enzymes | Incubation | Nucleotide sequence | Hydrolase | Cloning | Corn | endo-1,4-β-Xylanase | Ferulic acid | Cellulase | Biodiesel fuels | Cellulose acetate | Galactose | Acetic acid | Glycoside hydrolase
Journal Article