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1. Full Text Pelagiphages in the Podoviridae family integrate into host genomes
by Zhao, Yanlin and Qin, Fang and Zhang, Rui and Giovannoni, Stephen J and Zhang, Zefeng and Sun, Jing and Du, Sen and Rensing, Christopher
Environmental microbiology, ISSN 1462-2912, 06/2019, Volume 21, Issue 6, pp. 1989 - 2001
Life Sciences & Biomedicine | Microbiology | Science & Technology | Carbon - metabolism | Genome, Viral | Genome, Bacterial | Alphaproteobacteria - metabolism | Lysogeny | Prophages - classification | Phylogeny | Podoviridae - physiology | Virus Integration | Prophages - genetics | Bacteriophages - isolation & purification | Podoviridae - classification | Alphaproteobacteria - genetics | Bacteriophages - classification | Alphaproteobacteria - virology | Podoviridae - isolation & purification | Prophages - isolation & purification | Bacteriophages - genetics | Bacteriophages - physiology | Podoviridae - genetics | Prophages - physiology | Medicine, Experimental | Medical research | Mortality | Genomics | Transfer RNA | Integration | Populations | tRNA | Gene transfer | Genes | Phages | Infections | Genomes | Surveying | Nannoplankton | Immunity | Subgroups | Carbon cycle | Bacterioplankton | Transduction | Prophages | Nutrient cycles | Index Medicus
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2. Full Text Prophages and adaptation of Staphylococcus aureus ST398 to the human clinic
by Diene, Seydina M and Corvaglia, Anna Rita and François, Patrice and van der Mee-Marquet, Nathalie and Amirault, P and Lehiani, O and Archambault, M and Prevost-Oussar, M and Bachelier, M.N and Guinard, F and Morel-Desjardins, E and Bloc, D and de Gialluly, C and Morange, V and Boucher, M and Fongauffier, F and Kourta, M.J and Cattier, B and Courtin, M.-C and Chandesris, C and Fournier-Hoock, R and Chevereau, V and Gourdet, T and Courouble, G and Decreux, C and Ratovohery, D and Guillon, M.F and Denis, C and Foloppe, P and Deperrois, F and Poitvin, D and Watt, S and Fievre, C and Michel, V and Perigois, F and Graveron, J.L and Jehanno, D and Grobost, F and Harriau, P and Lepineux da Rocha, A and Hombrouck-Alet, C and Naudion, C and Imbault, D and Paba, O and Lesimple, A.L and Laurent, O and Louvier, X and Rousseau, B and Morin, E and Roussin, A and Narbey, D and Neveu, C and Secher, A and Petit le Gouas, G and Regional Infection Control Grp Ctr and Regional Infection Control Group of the Centre Region and on behalf of the Regional Infection Control Group of the Centre Region
BMC genomics, ISSN 1471-2164, 02/2017, Volume 18, Issue 1, pp. 133 - 133
CC398 lineage | Prophage | Livestock-associated | Bloodstream infections | φ3-prophage | Evolution | Phage content | Staphylococcus aureus | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Adaptation, Physiological | Staphylococcus aureus - genetics | Staphylococcus aureus - physiology | Humans | Phylogeny | Whole Genome Sequencing | Animals | Polymorphism, Single Nucleotide | Staphylococcal Infections - microbiology | Staphylococcus aureus - virology | Staphylococcal Infections - blood | Evolution, Molecular | Prophages - physiology | Transposons | Analysis | Prophase | Genetic aspects | Research | Health aspects | Animal models | Pathogenesis | Genes | Cloning | Virulence | Lysogeny | Health risks | Staphylococcus infections | Genomes | Infections | Genetic diversity | Gene sequencing | Proteins | Antibiotics | Human performance | Endocarditis | Phylogenetics | Prophages | Public health | Adaptation | Index Medicus | Life Sciences | Microbiology and Parasitology | Human health and pathology
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3. Full Text Gammasphaerolipovirus, a newly proposed bacteriophage genus, unifies viruses of halophilic archaea and thermophilic bacteria within the novel family Sphaerolipoviridae
by Pawlowski, Alice and Rissanen, Ilona and Bamford, Jaana K. H and Krupovic, Mart and Jalasvuori, Matti
Archives of virology, ISSN 0304-8608, 6/2014, Volume 159, Issue 6, pp. 1541 - 1554
Medical Microbiology | Infectious Diseases | Biomedicine | Virology | Life Sciences & Biomedicine | Science & Technology | DNA Viruses - ultrastructure | Molecular Sequence Data | Prophages - classification | Prophages - ultrastructure | Sequence Analysis, DNA | DNA Viruses - genetics | Prophages - genetics | Bacteriophages - isolation & purification | DNA Viruses - isolation & purification | Sequence Homology | Archaea - virology | Bacteriophages - classification | Bacteriophages - ultrastructure | Prophages - isolation & purification | Genes, Viral | Thermus thermophilus - virology | Bacteriophages - genetics | DNA Viruses - classification | Virion - ultrastructure | DNA, Viral - genetics | Cluster Analysis | Virus diseases | Proteins | Bacteria | Genomics | Adenosine triphosphatase | Index Medicus | Bacteriophages | DNA Viruses | Archaea | Thermus thermophilus | Life Sciences | Microbiology and Parasitology | Virion | Prophages | DNA, Viral
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4. Full Text Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas?
by Paul, John H
The ISME Journal, ISSN 1751-7362, 06/2008, Volume 2, Issue 6, pp. 579 - 589
Gene transfer agents | Prophages | Repressors | Marine bacteria | Microbial genomes | Environmental Sciences & Ecology | Ecology | Life Sciences & Biomedicine | Microbiology | Science & Technology | Genome, Viral | Bacteria - metabolism | Seawater - microbiology | Lysogeny | Molecular Sequence Data | Viral Proteins - genetics | Bacterial Physiological Phenomena | Gene Transfer, Horizontal | Bacteria - genetics | Viral Proteins - metabolism | Prophages - genetics | Phenotype | Prophages - isolation & purification | Bacteria - virology | Prophages - physiology | Index Medicus
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5. Full Text Prophages of the genus Bifidobacterium as modulating agents of the infant gut microbiota
by Lugli, Gabriele Andrea and Milani, Christian and Turroni, Francesca and Tremblay, Denise and Ferrario, Chiara and Mancabelli, Leonardo and Duranti, Sabrina and Ward, Doyle V and Ossiprandi, Maria Cristina and Moineau, Sylvain and Sinderen, Douwe and Ventura, Marco
Environmental microbiology, ISSN 1462-2912, 07/2016, Volume 18, Issue 7, pp. 2196 - 2213
Life Sciences & Biomedicine | Microbiology | Science & Technology | Bifidobacterium - classification | Bifidobacterium - genetics | Humans | Gastrointestinal Microbiome | Gastrointestinal Tract - microbiology | Infant | Male | Prophages - classification | Phylogeny | Bifidobacterium - isolation & purification | Prophages - genetics | Biological Evolution | Genetic Variation | Bifidobacterium - virology | Prophages - isolation & purification | Female | Prophages - physiology | Biological products | Microbiota (Symbiotic organisms) | Analysis | Genomics | Biological diversity | Genomes | Genetic diversity | Index Medicus
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6. Full Text Genetic and life-history traits associated with the distribution of prophages in bacteria
by Touchon, Marie and Bernheim, Aude and Rocha, Eduardo P.C
The ISME Journal, ISSN 1751-7362, 11/2016, Volume 10, Issue 11, pp. 2744 - 2754
Environmental Sciences & Ecology | Ecology | Life Sciences & Biomedicine | Microbiology | Science & Technology | Bacteria - isolation & purification | Genome, Bacterial | Base Sequence | Prophages - isolation & purification | CRISPR-Cas Systems | Life History Traits | Lysogeny | Bacteria - classification | Bacteria - genetics | Bacteria - virology | Prophages - genetics | Prophages - physiology | Index Medicus | Original
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7. Full Text Antibiotics in feed induce prophages in swine fecal microbiomes
by Allen, Heather K and Looft, Torey and Bayles, Darrell O and Humphrey, Samuel and Levine, Uri Y and Alt, David and Stanton, Thaddeus B
mBio, ISSN 2150-7511, 11/2011, Volume 2, Issue 6
Life Sciences & Biomedicine | Microbiology | Science & Technology | Prophages - growth & development | Biota | Bacteria - drug effects | Prophages - drug effects | Carbadox - pharmacology | DNA, Bacterial - chemistry | DNA, Ribosomal - chemistry | Swine | Bacteria - classification | Bacteria - virology | DNA, Ribosomal - genetics | Gastrointestinal Tract - virology | Gastrointestinal Tract - microbiology | Prophages - classification | Penicillin G - pharmacology | Bacteria - genetics | Sequence Analysis, DNA | Sulfamethazine - pharmacology | Prophages - genetics | Chlortetracycline - pharmacology | Animals | DNA, Bacterial - genetics | RNA, Ribosomal, 16S - genetics | Anti-Bacterial Agents - pharmacology | Metagenome | Drug Combinations | Animal Feed | Index Medicus
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8. Full Text PHAST: A Fast Phage Search Tool
by Zhou, You and Liang, Yongjie and Lynch, Karlene H and Dennis, Jonathan J and Wishart, David S
Nucleic acids research, ISSN 0305-1048, 7/2011, Volume 39, Issue suppl_2, pp. W347 - W352
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Genome, Bacterial | Molecular Sequence Annotation | Databases, Genetic | Software | Internet | Sequence Analysis, DNA | Prophages - genetics | Index Medicus | Databases | Nucleotide sequence | Plasmids | Phages | Data processing | genomics | Genomes | Prophages
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