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Nucleic acids research, ISSN 1362-4962, 2014, Volume 42, Issue W1, pp. W252 - W258
Protein structure homology modelling has become a routine technique to generate 3D models for proteins when experimental structures are not available... 
QUALITY | SINGLE | SCORE | RECOGNITION | PDBVIEWER | WEB | SERVER | BIOCHEMISTRY & MOLECULAR BIOLOGY | ENVIRONMENT | SECONDARY STRUCTURE | STRUCTURE PREDICTION | Protein Structure, Tertiary | Protein Structure, Quaternary | Models, Molecular | Software | Structural Homology, Protein | Internet | Evolution, Molecular
Journal Article
Trends in biochemical sciences (Amsterdam. Regular ed.), ISSN 0968-0004, 2018, Volume 43, Issue 3, pp. 157 - 169
Observing the structures of proteins within the cell and tracking structural changes under different cellular conditions are the ultimate challenges for structural biology... 
CELLS | DISTANCE RESTRAINTS | BIOINFORMATICS | ASSEMBLIES | LINKED PEPTIDES | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHEMICAL CROSS-LINKING | COMPLEXES | BIOLOGY | ARCHITECTURE | MASS-SPECTROMETRY | Protein Structure, Tertiary | Cross-Linking Reagents - chemistry | Proteins - chemistry | Humans | Mass Spectrometry | Proteins | Spectrum analysis
Journal Article
Biochemistry, ISSN 0006-2960, 09/2011, Volume 50, Issue 35, pp. 7612 - 7628
Journal Article
Journal of the American Chemical Society, ISSN 0002-7863, 09/2015, Volume 137, Issue 36, pp. 11622 - 11630
.... Recent success in the inhibition of difficult PPIs by secondary structure mimetics also points to potential limitations, because often, specific cases require tertiary structure mimetics... 
COILED-COIL STRUCTURES | INTERFACES | HOT-SPOTS | RECEPTOR | INHIBITORS | CANCER | RESIDUES | CHEMISTRY, MULTIDISCIPLINARY | ALPHA-HELICES | HIGH-HANGING FRUIT | CLINICAL-SIGNIFICANCE | Protein Structure, Tertiary | Protein Binding | Proteins - chemistry | Dimerization | Proteins | Coils | Design engineering | Data banks | Coiling | Modulation | Helical | Bundles | Modulators
Journal Article
Journal Article
Protein Science, ISSN 0961-8368, 04/2015, Volume 24, Issue 4, pp. 508 - 524
Finding backbone substructures from the Protein Data Bank that match an arbitrary query structural motif, composed of multiple disjoint segments, is a problem of growing relevance in structure... 
topology remodeling | computational protein design | designability landscape | protein structure search | MOTIFS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ALGORITHM | PROOF | STRUCTURE ALIGNMENT | BCL-2 | PEPTIDES | DATABASE | COMPUTATIONAL DESIGN | PACKING | Protein Structure, Tertiary | Amino Acid Sequence | Computational Biology - methods | Proteins - metabolism | Databases, Protein | Models, Molecular | Proteins - chemistry
Journal Article
International journal of cancer, ISSN 0020-7136, 2018, Volume 143, Issue 1, pp. 167 - 178
Tertiary lymphoid structures (TLSs) display phenotypic and functional characteristics of secondary lymphoid organs, and often develop in tissues affected by chronic inflammation, as well as in certain inflammation... 
ectopic lymphoid structures | gastric cancer | tertiary lymphoid structures | STAT3 | interleukin‐17 | interleukin-17 | IMMUNE CELLS | DENDRITIC CELLS | TUMOR PROGRESSION | TISSUE | PROGNOSTIC VALUE | ORGAN | INFILTRATION | B-CELLS | ONCOLOGY | INFLAMMATION | TH17 CELLS | Stomach Neoplasms - genetics | Tertiary Lymphoid Structures - immunology | Prognosis | Cytokine Receptor gp130 - metabolism | Signal Transduction | Tertiary Lymphoid Structures - genetics | Cytokine Receptor gp130 - genetics | Humans | Stomach Neoplasms - metabolism | Helicobacter Infections - immunology | Helicobacter Infections - genetics | Chemokines - genetics | Stomach Neoplasms - immunology | Animals | Survival Analysis | Tertiary Lymphoid Structures - metabolism | Helicobacter Infections - metabolism | Mice | STAT3 Transcription Factor - genetics | STAT3 Transcription Factor - metabolism | Disease Models, Animal | Autoimmunity | Mobile communication systems | Wireless communication systems | Interleukins | Analysis | Inflammation | T cells | CCL19 protein | CXCL13 protein | Organs | Stat3 protein | Chronic infection | Oncology | Lymphocytes T | Stomach cancer | Patients | Survival | Gastritis | Signaling | Cellular communication | Lymphocytes B | Lymphocytes | Intestine | CCL21 protein | Tumorigenesis | Gastric cancer | Chemokines | Tumors | Cancer | Glycoprotein gp130 | Tumor Immunology and Microenvironment
Journal Article
Angewandte Chemie (International ed.), ISSN 1433-7851, 2015, Volume 54, Issue 24, pp. 7114 - 7119
...‐guided synthesis by in situ click chemistry is combined with synthetic epitope targeting to exploit the tertiary structure of the BoNT protein as a landscape for assembling a competitive inhibitor. A substrate... 
epitope targeting | peptides | botulinum neurotoxin | combinatorial screening | target‐guided synthesis | Target-guided synthesis | Botulinum neurotoxin | Epitope targeting | Combinatorial screening | Peptides | target-guided synthesis | EXOCYTOSIS | NEUROTRANSMITTER RELEASE | STRATEGY | TETANUS | IDENTIFICATION | CHEMISTRY, MULTIDISCIPLINARY | CAPTURE AGENTS | SITU | SEROTYPE | Epitopes - metabolism | Humans | Neurons - cytology | Botulinum Toxins, Type A - antagonists & inhibitors | Enzyme Inhibitors - chemical synthesis | Botulinum Toxins, Type A - drug effects | Peptides - chemical synthesis | Enzyme Inhibitors - chemistry | Cell Differentiation | Neurons - metabolism | Induced Pluripotent Stem Cells - cytology | Neurons - drug effects | Induced Pluripotent Stem Cells - metabolism | Protein Structure, Tertiary | Amino Acid Sequence | Catalytic Domain | Induced Pluripotent Stem Cells - drug effects | Peptides - chemistry | Click Chemistry | Cells, Cultured | Enzyme Inhibitors - pharmacology | Peptides - pharmacology | Protein Binding | Ligands | Epitopes - chemistry | Botulinum Toxins, Type A - metabolism | Microscopy, Fluorescence | Antigenic determinants | Botulism | Index Medicus | Proteins | Inhibitors | Synthesis | Toxins | Intoxication | Inhibition | Screens
Journal Article
Blood, ISSN 1528-0020, 2008, Volume 111, Issue 3, pp. 1240 - 1247
.... We have determined the structure of a fully active, recombinant form of factor VIII (r-fVIII), which consists of a heterodimer of peptides, respectively containing the A1-A2 and A3-C1-C2 domains... 
EPITOPE | ACTIVATED PROTEIN-C | BLOOD-COAGULATION | CRYSTAL-STRUCTURE | FACTOR-V | SURFACE | BINDING-SITE | CASCADE | HEMATOLOGY | VON-WILLEBRAND-FACTOR | FACTOR-XA | Protein Structure, Tertiary | Cricetinae | Cricetulus | Factor VIII - chemistry | Factor VIII - genetics | Models, Molecular | Glycosylation | Animals | Protein Structure, Quaternary | Protein Binding | Factor VIII - metabolism | Dimerization | CHO Cells | Hemostasis, Thrombosis, and Vascular Biology
Journal Article