1.
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Bimodal expression of PHO84 is modulated by early termination of antisense transcription
Nature Structural and Molecular Biology, ISSN 1545-9993, 07/2013, Volume 20, Issue 7, pp. 851 - 858
Many Saccharomyces cerevisiae genes encode antisense transcripts, some of which are unstable and degraded by the exosome component Rrp6. Loss of Rrp6 results...
CRYPTIC UNSTABLE TRANSCRIPTS | PERVASIVE TRANSCRIPTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | INTERGENIC TRANSCRIPTION | SACCHAROMYCES-CEREVISIAE | CELL BIOLOGY | BIOPHYSICS | BINDING PROTEINS NRD1 | GENE-EXPRESSION | POLY(A) POLYMERASE | POLYMERASE-II TRANSCRIPTS | BIDIRECTIONAL PROMOTERS | RNA DEGRADATION | Saccharomyces cerevisiae - genetics | Multiprotein Complexes | Saccharomyces cerevisiae Proteins - biosynthesis | RNA, Messenger - metabolism | Promoter Regions, Genetic - genetics | RNA, Messenger - biosynthesis | RNA Helicases - physiology | Transcription, Genetic | RNA, Fungal - genetics | Gene Expression Regulation, Fungal | RNA-Binding Proteins - physiology | In Situ Hybridization, Fluorescence | Exosome Multienzyme Ribonuclease Complex - physiology | Saccharomyces cerevisiae Proteins - genetics | RNA, Fungal - metabolism | Polynucleotide Adenylyltransferase - physiology | Proton-Phosphate Symporters - genetics | RNA, Antisense - metabolism | Polyadenylation | Metalloendopeptidases - physiology | Models, Genetic | Nuclear Proteins - physiology | Saccharomyces cerevisiae Proteins - physiology | Histone Deacetylases - physiology | Proton-Phosphate Symporters - biosynthesis | Histone-Lysine N-Methyltransferase - physiology | DNA Helicases - physiology | RNA, Antisense - genetics | Cytogenetics | Research | Genetic transcription | DNA methylation | Gene expression | Molecular biology | Ribonucleic acid--RNA | Rrp6 | Nrd1-Nab3-Sen1 | transcription termination | PHO84 regulation | antisense RNA | yeast | single molecule FISH | antisense 3′ end processing
CRYPTIC UNSTABLE TRANSCRIPTS | PERVASIVE TRANSCRIPTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | INTERGENIC TRANSCRIPTION | SACCHAROMYCES-CEREVISIAE | CELL BIOLOGY | BIOPHYSICS | BINDING PROTEINS NRD1 | GENE-EXPRESSION | POLY(A) POLYMERASE | POLYMERASE-II TRANSCRIPTS | BIDIRECTIONAL PROMOTERS | RNA DEGRADATION | Saccharomyces cerevisiae - genetics | Multiprotein Complexes | Saccharomyces cerevisiae Proteins - biosynthesis | RNA, Messenger - metabolism | Promoter Regions, Genetic - genetics | RNA, Messenger - biosynthesis | RNA Helicases - physiology | Transcription, Genetic | RNA, Fungal - genetics | Gene Expression Regulation, Fungal | RNA-Binding Proteins - physiology | In Situ Hybridization, Fluorescence | Exosome Multienzyme Ribonuclease Complex - physiology | Saccharomyces cerevisiae Proteins - genetics | RNA, Fungal - metabolism | Polynucleotide Adenylyltransferase - physiology | Proton-Phosphate Symporters - genetics | RNA, Antisense - metabolism | Polyadenylation | Metalloendopeptidases - physiology | Models, Genetic | Nuclear Proteins - physiology | Saccharomyces cerevisiae Proteins - physiology | Histone Deacetylases - physiology | Proton-Phosphate Symporters - biosynthesis | Histone-Lysine N-Methyltransferase - physiology | DNA Helicases - physiology | RNA, Antisense - genetics | Cytogenetics | Research | Genetic transcription | DNA methylation | Gene expression | Molecular biology | Ribonucleic acid--RNA | Rrp6 | Nrd1-Nab3-Sen1 | transcription termination | PHO84 regulation | antisense RNA | yeast | single molecule FISH | antisense 3′ end processing
Journal Article
Cell, ISSN 0092-8674, 2007, Volume 131, Issue 4, pp. 706 - 717
Genome-wide studies in reveal that the transcriptome includes numerous antisense RNAs as well as intergenic transcripts regulated by the exosome component...
RNA | YEAST | COMPLEX | BIOCHEMISTRY & MOLECULAR BIOLOGY | DEGRADATION | EXOSOME SUBUNIT RRP6P | POLY(A) POLYMERASE | HDA1 DEACETYLASE | QUALITY-CONTROL | SACCHAROMYCES-CEREVISIAE | EXPRESSION | GENOME | CELL BIOLOGY | Gene Expression Regulation, Fungal | Promoter Regions, Genetic | Exoribonucleases - genetics | Histone Deacetylases - genetics | Saccharomyces cerevisiae - genetics | Gene Silencing | Histone Deacetylases - metabolism | Saccharomyces cerevisiae Proteins - genetics | RNA Stability | DNA-Directed DNA Polymerase - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - genetics | Cellular Senescence | RNA, Antisense - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Transcription, Genetic | Lysine - metabolism | DNA-Directed DNA Polymerase - metabolism | Histones - metabolism | Exosome Multienzyme Ribonuclease Complex | Exoribonucleases - metabolism | RNA, Antisense - genetics | Antisense RNA | Chromatin | Genetic engineering | Genetic aspects | Genomics
RNA | YEAST | COMPLEX | BIOCHEMISTRY & MOLECULAR BIOLOGY | DEGRADATION | EXOSOME SUBUNIT RRP6P | POLY(A) POLYMERASE | HDA1 DEACETYLASE | QUALITY-CONTROL | SACCHAROMYCES-CEREVISIAE | EXPRESSION | GENOME | CELL BIOLOGY | Gene Expression Regulation, Fungal | Promoter Regions, Genetic | Exoribonucleases - genetics | Histone Deacetylases - genetics | Saccharomyces cerevisiae - genetics | Gene Silencing | Histone Deacetylases - metabolism | Saccharomyces cerevisiae Proteins - genetics | RNA Stability | DNA-Directed DNA Polymerase - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - genetics | Cellular Senescence | RNA, Antisense - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Transcription, Genetic | Lysine - metabolism | DNA-Directed DNA Polymerase - metabolism | Histones - metabolism | Exosome Multienzyme Ribonuclease Complex | Exoribonucleases - metabolism | RNA, Antisense - genetics | Antisense RNA | Chromatin | Genetic engineering | Genetic aspects | Genomics
Journal Article
Cell Death and Differentiation, ISSN 1350-9047, 2014, Volume 21, Issue 8, pp. 1209 - 1217
The mitochondrial phosphate carrier (PiC) is critical for ATP synthesis by serving as the primary means for mitochondrial phosphate import across the inner...
RESPIRATORY-CHAIN | CYCLOPHILIN-D | TRANSPORT | ATP SYNTHASE | CA2 | ADENINE-NUCLEOTIDE TRANSLOCATOR | BIOCHEMISTRY & MOLECULAR BIOLOGY | RAT-LIVER MITOCHONDRIA | P-I | DEFICIENCY | CELL-DEATH | CELL BIOLOGY | Mitochondrial Membrane Transport Proteins - metabolism | Mitochondria, Heart - metabolism | Proton-Phosphate Symporters - deficiency | Calcium - metabolism | Humans | Mice, Inbred C57BL | Gene Expression Regulation | Oxidative Stress - genetics | Mitochondrial Membrane Transport Proteins - genetics | Cardiomyopathies - genetics | Animals | Proton-Phosphate Symporters - genetics | Cardiomyopathies - metabolism | Gene Deletion | Mice | Mitochondria, Heart - genetics | Original Paper
RESPIRATORY-CHAIN | CYCLOPHILIN-D | TRANSPORT | ATP SYNTHASE | CA2 | ADENINE-NUCLEOTIDE TRANSLOCATOR | BIOCHEMISTRY & MOLECULAR BIOLOGY | RAT-LIVER MITOCHONDRIA | P-I | DEFICIENCY | CELL-DEATH | CELL BIOLOGY | Mitochondrial Membrane Transport Proteins - metabolism | Mitochondria, Heart - metabolism | Proton-Phosphate Symporters - deficiency | Calcium - metabolism | Humans | Mice, Inbred C57BL | Gene Expression Regulation | Oxidative Stress - genetics | Mitochondrial Membrane Transport Proteins - genetics | Cardiomyopathies - genetics | Animals | Proton-Phosphate Symporters - genetics | Cardiomyopathies - metabolism | Gene Deletion | Mice | Mitochondria, Heart - genetics | Original Paper
Journal Article
PLoS ONE, ISSN 1932-6203, 05/2015, Volume 10, Issue 5, p. e0126186
A total of 13 phosphate transporters in rice (Oryza sative) have been identified as belonging to the Pht1 family, which mediates inorganic phosphate (Pi)...
LIFE-CYCLE | PHOSPHORUS | CELLS | TRANSLOCATION | HIGHER-PLANTS | MULTIDISCIPLINARY SCIENCES | ACQUISITION | FUNCTIONAL-ANALYSIS | STARVATION | ARABIDOPSIS | EXPRESSION | Oryza - metabolism | Saccharomyces cerevisiae - genetics | Glucuronidase - metabolism | Phosphate Transport Proteins - metabolism | Plant Roots - genetics | Genetic Complementation Test | Saccharomyces cerevisiae - metabolism | Biological Transport | Oryza - genetics | Gene Expression Regulation, Plant | Plant Proteins - metabolism | Plant Shoots - genetics | Phosphate Transport Proteins - genetics | Genes, Reporter | Promoter Regions, Genetic | Plant Roots - metabolism | Saccharomyces cerevisiae Proteins - genetics | Plant Proteins - genetics | Phosphates - metabolism | Proton-Phosphate Symporters - genetics | Glucuronidase - genetics | Plant Leaves - genetics | Plant Leaves - metabolism | Plant Shoots - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Homeostasis - genetics | Homeostasis | Physiological aspects | Genetic aspects | Research | Carrier proteins | Rice | Biological properties | Phosphates | Translocation | Starvation | Yeast | Transcription | Laboratories | Roots | Phosphate transporter | Genomes | Gene expression | Straw | Membrane proteins | Proteins | Signal transduction | Leaves | Reporter gene | Physiology | Shoots | Stamens | Transporter
LIFE-CYCLE | PHOSPHORUS | CELLS | TRANSLOCATION | HIGHER-PLANTS | MULTIDISCIPLINARY SCIENCES | ACQUISITION | FUNCTIONAL-ANALYSIS | STARVATION | ARABIDOPSIS | EXPRESSION | Oryza - metabolism | Saccharomyces cerevisiae - genetics | Glucuronidase - metabolism | Phosphate Transport Proteins - metabolism | Plant Roots - genetics | Genetic Complementation Test | Saccharomyces cerevisiae - metabolism | Biological Transport | Oryza - genetics | Gene Expression Regulation, Plant | Plant Proteins - metabolism | Plant Shoots - genetics | Phosphate Transport Proteins - genetics | Genes, Reporter | Promoter Regions, Genetic | Plant Roots - metabolism | Saccharomyces cerevisiae Proteins - genetics | Plant Proteins - genetics | Phosphates - metabolism | Proton-Phosphate Symporters - genetics | Glucuronidase - genetics | Plant Leaves - genetics | Plant Leaves - metabolism | Plant Shoots - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Homeostasis - genetics | Homeostasis | Physiological aspects | Genetic aspects | Research | Carrier proteins | Rice | Biological properties | Phosphates | Translocation | Starvation | Yeast | Transcription | Laboratories | Roots | Phosphate transporter | Genomes | Gene expression | Straw | Membrane proteins | Proteins | Signal transduction | Leaves | Reporter gene | Physiology | Shoots | Stamens | Transporter
Journal Article
5.
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Dynamic Large-Scale Chromosomal Rearrangements Fuel Rapid Adaptation in Yeast Populations
PLoS Genetics, ISSN 1553-7390, 01/2013, Volume 9, Issue 1, p. e1003232
Large-scale genome rearrangements have been observed in cells adapting to various selective conditions during laboratory evolution experiments. However, it...
MOLECULAR CHARACTERIZATION | PHOSPHATE TRANSPORTER | CUP2 GENE-PRODUCT | CANDIDA-ALBICANS | BUDDING YEAST | GENOME EVOLUTION | GENETICS & HEREDITY | COPPER | DRUG-RESISTANCE | SACCHAROMYCES-CEREVISIAE | ADAPTIVE EVOLUTION | Genetics, Population | Metallothionein - metabolism | Saccharomyces cerevisiae - genetics | Segmental Duplications, Genomic | Gene Dosage | Saccharomyces cerevisiae Proteins - genetics | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Biological Evolution | DNA-Binding Proteins - metabolism | Saccharomyces cerevisiae - metabolism | Transcription Factors - metabolism | Metallothionein - genetics | Proton-Phosphate Symporters - genetics | Genome, Fungal | Chromosomes - genetics | Chromosome Aberrations | Saccharomyces cerevisiae Proteins - metabolism | Genomic Instability - drug effects | Proton-Phosphate Symporters - metabolism | Israel | Copper - toxicity | Genomic Instability - genetics | Yeast fungi | Physiological aspects | Genetic aspects | Research | Genetic regulation | Chromosomes | Health aspects | Proteins | Genetics | Yeast | Mutation | Genomics
MOLECULAR CHARACTERIZATION | PHOSPHATE TRANSPORTER | CUP2 GENE-PRODUCT | CANDIDA-ALBICANS | BUDDING YEAST | GENOME EVOLUTION | GENETICS & HEREDITY | COPPER | DRUG-RESISTANCE | SACCHAROMYCES-CEREVISIAE | ADAPTIVE EVOLUTION | Genetics, Population | Metallothionein - metabolism | Saccharomyces cerevisiae - genetics | Segmental Duplications, Genomic | Gene Dosage | Saccharomyces cerevisiae Proteins - genetics | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Biological Evolution | DNA-Binding Proteins - metabolism | Saccharomyces cerevisiae - metabolism | Transcription Factors - metabolism | Metallothionein - genetics | Proton-Phosphate Symporters - genetics | Genome, Fungal | Chromosomes - genetics | Chromosome Aberrations | Saccharomyces cerevisiae Proteins - metabolism | Genomic Instability - drug effects | Proton-Phosphate Symporters - metabolism | Israel | Copper - toxicity | Genomic Instability - genetics | Yeast fungi | Physiological aspects | Genetic aspects | Research | Genetic regulation | Chromosomes | Health aspects | Proteins | Genetics | Yeast | Mutation | Genomics
Journal Article
Science, ISSN 0036-8075, 6/2004, Volume 304, Issue 5678, pp. 1811 - 1814
Noise, or random fluctuations, in gene expression may produce variability in cellular behavior. To measure the noise intrinsic to eukaryotic gene expression,...
Messenger RNA | Scatter plots | DNA | Signal noise | Fluorescence | Reports | Stochastic models | Gene expression | Noise measurement | Modeling | Noise prediction | YEAST | ACTIVATION | CHROMATIN | PRODUCT | MULTIDISCIPLINARY SCIENCES | PHO5 PROMOTER | NOISE | NETWORKS | SACCHAROMYCES-CEREVISIAE | LOCUS | Chromatin - metabolism | Green Fluorescent Proteins | Promoter Regions, Genetic | Gene Expression | Saccharomyces cerevisiae - physiology | Saccharomyces cerevisiae - genetics | Transcriptional Activation | Saccharomyces cerevisiae Proteins - genetics | RNA, Messenger - metabolism | Luminescent Proteins - biosynthesis | Carrier Proteins - genetics | Flow Cytometry | Proton-Phosphate Symporters - genetics | Cell Cycle | Stochastic Processes | Acid Phosphatase | Alleles | TATA Box | Genes, Fungal | Transcription, Genetic | Bacterial Proteins - biosynthesis | Models, Genetic | Mutation | Measurement | Physiological aspects | Research | Stochastic processes | Stochastic control theory | Eukaryotes | Cellular biology
Messenger RNA | Scatter plots | DNA | Signal noise | Fluorescence | Reports | Stochastic models | Gene expression | Noise measurement | Modeling | Noise prediction | YEAST | ACTIVATION | CHROMATIN | PRODUCT | MULTIDISCIPLINARY SCIENCES | PHO5 PROMOTER | NOISE | NETWORKS | SACCHAROMYCES-CEREVISIAE | LOCUS | Chromatin - metabolism | Green Fluorescent Proteins | Promoter Regions, Genetic | Gene Expression | Saccharomyces cerevisiae - physiology | Saccharomyces cerevisiae - genetics | Transcriptional Activation | Saccharomyces cerevisiae Proteins - genetics | RNA, Messenger - metabolism | Luminescent Proteins - biosynthesis | Carrier Proteins - genetics | Flow Cytometry | Proton-Phosphate Symporters - genetics | Cell Cycle | Stochastic Processes | Acid Phosphatase | Alleles | TATA Box | Genes, Fungal | Transcription, Genetic | Bacterial Proteins - biosynthesis | Models, Genetic | Mutation | Measurement | Physiological aspects | Research | Stochastic processes | Stochastic control theory | Eukaryotes | Cellular biology
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 12/2016, Volume 291, Issue 51, pp. 26388 - 26398
Pho84, a major facilitator superfamily (MFS) protein, is the main high-affinity Pi transceptor in Saccharomyces cerevisiae. Although transport mechanisms have...
TRANSPORTER | STEERED MOLECULAR-DYNAMICS | MECHANISM | MEAN FORCE | MEMBRANE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FORCE-FIELD | MAJOR FACILITATOR SUPERFAMILY | SIMULATIONS | PARAMETERS | POTENTIALS | Catalytic Domain | Saccharomyces cerevisiae - genetics | Phosphates - chemistry | Crystallography, X-Ray | Saccharomyces cerevisiae Proteins - genetics | Molecular Dynamics Simulation | Saccharomyces cerevisiae - chemistry | Proton-Phosphate Symporters - chemistry | Saccharomyces cerevisiae - metabolism | Phosphates - metabolism | Tyrosine - metabolism | Proton-Phosphate Symporters - genetics | Biological Transport, Active - physiology | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Structural Homology, Protein | Tyrosine - chemistry | Saccharomyces cerevisiae Proteins - chemistry | Tyrosine - genetics
TRANSPORTER | STEERED MOLECULAR-DYNAMICS | MECHANISM | MEAN FORCE | MEMBRANE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FORCE-FIELD | MAJOR FACILITATOR SUPERFAMILY | SIMULATIONS | PARAMETERS | POTENTIALS | Catalytic Domain | Saccharomyces cerevisiae - genetics | Phosphates - chemistry | Crystallography, X-Ray | Saccharomyces cerevisiae Proteins - genetics | Molecular Dynamics Simulation | Saccharomyces cerevisiae - chemistry | Proton-Phosphate Symporters - chemistry | Saccharomyces cerevisiae - metabolism | Phosphates - metabolism | Tyrosine - metabolism | Proton-Phosphate Symporters - genetics | Biological Transport, Active - physiology | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Structural Homology, Protein | Tyrosine - chemistry | Saccharomyces cerevisiae Proteins - chemistry | Tyrosine - genetics
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 2/2010, Volume 107, Issue 7, pp. 2890 - 2895
A novel concept in eukaryotic signal transduction is the use of nutrient transporters and closely related proteins as nutrient sensors. The action mechanism of...
Phosphates | Yeasts | Receptors | Phosphate transport proteins | Amino acids | Agonists | Esters | Sensors | Saccharomyces cerevisiae | Binding sites | Protein kinase A | Nutrient sensing | Growth induction | ACTIVATION | MULTIDISCIPLINARY SCIENCES | growth induction | HOMOLOG SSY1P | PERMEASE | DEPENDENT PROTEIN-KINASE | SENSOR | AMINO-ACID TRANSCEPTOR | SACCHAROMYCES-CEREVISIAE | PLASMA-MEMBRANE | A PATHWAY | GLUCOSE | nutrient sensing | protein kinase A | Cyclic AMP-Dependent Protein Kinases - metabolism | Reproducibility of Results | Mutagenesis, Site-Directed | Phosphonoacetic Acid - metabolism | Glycerophosphates - metabolism | Binding Sites - genetics | Saccharomyces cerevisiae Proteins - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - agonists | Proton-Phosphate Symporters - genetics | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Membrane Transport Proteins - metabolism | Signal Transduction - physiology | Saccharomyces cerevisiae Proteins - agonists | Transducers, Biomedical | Protein tyrosine kinase | Genetic aspects | Cellular signal transduction | Research | Brewer's yeast | Signal transduction | Cysteine | Molecular modelling | Glycerol-3-phosphate | Phosphate | Nutrients | Biological Sciences
Phosphates | Yeasts | Receptors | Phosphate transport proteins | Amino acids | Agonists | Esters | Sensors | Saccharomyces cerevisiae | Binding sites | Protein kinase A | Nutrient sensing | Growth induction | ACTIVATION | MULTIDISCIPLINARY SCIENCES | growth induction | HOMOLOG SSY1P | PERMEASE | DEPENDENT PROTEIN-KINASE | SENSOR | AMINO-ACID TRANSCEPTOR | SACCHAROMYCES-CEREVISIAE | PLASMA-MEMBRANE | A PATHWAY | GLUCOSE | nutrient sensing | protein kinase A | Cyclic AMP-Dependent Protein Kinases - metabolism | Reproducibility of Results | Mutagenesis, Site-Directed | Phosphonoacetic Acid - metabolism | Glycerophosphates - metabolism | Binding Sites - genetics | Saccharomyces cerevisiae Proteins - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - agonists | Proton-Phosphate Symporters - genetics | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Membrane Transport Proteins - metabolism | Signal Transduction - physiology | Saccharomyces cerevisiae Proteins - agonists | Transducers, Biomedical | Protein tyrosine kinase | Genetic aspects | Cellular signal transduction | Research | Brewer's yeast | Signal transduction | Cysteine | Molecular modelling | Glycerol-3-phosphate | Phosphate | Nutrients | Biological Sciences
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 8/2011, Volume 108, Issue 31, pp. 12693 - 12698
DNA topoisomerases are believed to promote transcription by removing excessive DNA supercoils produced during elongation. However, it is unclear how...
Yeasts | Chromatin | RNA | DNA | Genes | Histones | Nucleosomes | Genomes | Open reading frames | Renovations | Gene regulation | Relaxase | Histone eviction | MULTIDISCIPLINARY SCIENCES | TRANSCRIPTION | CHROMATIN TEMPLATES | RIBOSOMAL-RNA | SACCHAROMYCES-CEREVISIAE | REPLICATION | MITOTIC CHROMOSOMES | gene regulation | relaxase | HETEROCHROMATIN | PHO5 PROMOTER | GENOME-WIDE | histone eviction | POLYMERASE-II | DNA Topoisomerases, Type II - metabolism | DNA Topoisomerases, Type I - metabolism | DNA, Fungal - genetics | Saccharomyces cerevisiae - genetics | DNA Topoisomerases, Type I - genetics | Nucleosomes - metabolism | Nucleosomes - genetics | RNA Polymerase II - metabolism | Saccharomyces cerevisiae Proteins - genetics | Promoter Regions, Genetic - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - genetics | Chromatin Immunoprecipitation | Genome, Fungal - genetics | DNA, Fungal - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Proton-Phosphate Symporters - metabolism | DNA Topoisomerases, Type II - genetics | Transcription, Genetic | Mutation | Biological Sciences
Yeasts | Chromatin | RNA | DNA | Genes | Histones | Nucleosomes | Genomes | Open reading frames | Renovations | Gene regulation | Relaxase | Histone eviction | MULTIDISCIPLINARY SCIENCES | TRANSCRIPTION | CHROMATIN TEMPLATES | RIBOSOMAL-RNA | SACCHAROMYCES-CEREVISIAE | REPLICATION | MITOTIC CHROMOSOMES | gene regulation | relaxase | HETEROCHROMATIN | PHO5 PROMOTER | GENOME-WIDE | histone eviction | POLYMERASE-II | DNA Topoisomerases, Type II - metabolism | DNA Topoisomerases, Type I - metabolism | DNA, Fungal - genetics | Saccharomyces cerevisiae - genetics | DNA Topoisomerases, Type I - genetics | Nucleosomes - metabolism | Nucleosomes - genetics | RNA Polymerase II - metabolism | Saccharomyces cerevisiae Proteins - genetics | Promoter Regions, Genetic - genetics | Saccharomyces cerevisiae - metabolism | Proton-Phosphate Symporters - genetics | Chromatin Immunoprecipitation | Genome, Fungal - genetics | DNA, Fungal - metabolism | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Proton-Phosphate Symporters - metabolism | DNA Topoisomerases, Type II - genetics | Transcription, Genetic | Mutation | Biological Sciences
Journal Article
Genetics, ISSN 0016-6731, 01/2018, Volume 208, Issue 1, pp. 191 - 205
SAGA (Spt-Ada-Gcn5-Acetyltransferase) and TFIID (transcription factor IID) have been previously shown to facilitate the formation of the PIC (pre-initiation...
TFIID | Transcription | 19S RP | SAGA | NuA4 | Gene Expression Regulation, Fungal | Promoter Regions, Genetic | Signal Transduction | Transcriptional Activation | Gene Expression Regulation | Fungal Proteins - genetics | Nutritional Physiological Phenomena - genetics | Yeasts - genetics | Proton-Phosphate Symporters - genetics | Culture Media | Proton-Phosphate Symporters - metabolism | Fungal Proteins - metabolism | Yeasts - metabolism | Nucleosomes | Genomics | Research | Phosphates | Initiation complex | Transcription factors | Yeast | Genes | Switches | Homeostasis | Metabolism | Kinases | Histone acetyltransferase | Recruitment | Proteins | Signaling | Growth media | TFIID protein | Regulatory mechanisms (biology) | Nutrients | Transporter | transcription | Investigations
TFIID | Transcription | 19S RP | SAGA | NuA4 | Gene Expression Regulation, Fungal | Promoter Regions, Genetic | Signal Transduction | Transcriptional Activation | Gene Expression Regulation | Fungal Proteins - genetics | Nutritional Physiological Phenomena - genetics | Yeasts - genetics | Proton-Phosphate Symporters - genetics | Culture Media | Proton-Phosphate Symporters - metabolism | Fungal Proteins - metabolism | Yeasts - metabolism | Nucleosomes | Genomics | Research | Phosphates | Initiation complex | Transcription factors | Yeast | Genes | Switches | Homeostasis | Metabolism | Kinases | Histone acetyltransferase | Recruitment | Proteins | Signaling | Growth media | TFIID protein | Regulatory mechanisms (biology) | Nutrients | Transporter | transcription | Investigations
Journal Article
Science, ISSN 0036-8075, 1/2003, Volume 299, Issue 5603, pp. 114 - 116
Chromatin remodeling is required for efficient transcription of eukaryotic genes. In a genetic selection for budding yeast mutants that were defective in...
Inositols | Chromatin | Transcriptional regulatory elements | Messenger RNA | Genes | DNA | Histones | Reports | Polyphosphates | Genetic mutation | Renovations | YEAST | TRANSCRIPTION FACTOR PHO4 | RECRUITMENT | COMPLEX | DOMAIN | PHOSPHORYLATION | MULTIDISCIPLINARY SCIENCES | KINASE | MESSENGER-RNA EXPORT | PROMOTER | SACCHAROMYCES-CEREVISIAE | Gene Expression Regulation, Fungal | Chromatin - metabolism | Promoter Regions, Genetic | Phosphate Transport Proteins - metabolism | Adenosine Triphosphatases - metabolism | Phosphotransferases (Alcohol Group Acceptor) - genetics | Fungal Proteins - genetics | Nuclear Proteins | Phosphotransferases (Alcohol Group Acceptor) - metabolism | DNA-Binding Proteins - metabolism | Transcription Factors - metabolism | Point Mutation | Saccharomycetales - genetics | Proton-Phosphate Symporters - genetics | Saccharomyces cerevisiae Proteins | Protein Binding | Proton-Phosphate Symporters - metabolism | Transcription, Genetic | Mutation | Inositol Phosphates - metabolism | Phosphate Transport Proteins - genetics | Saccharomycetales - metabolism | Fungal Proteins - metabolism | Inositol phosphates | Usage | Research | Enzymes | Biochemistry | Yeast
Inositols | Chromatin | Transcriptional regulatory elements | Messenger RNA | Genes | DNA | Histones | Reports | Polyphosphates | Genetic mutation | Renovations | YEAST | TRANSCRIPTION FACTOR PHO4 | RECRUITMENT | COMPLEX | DOMAIN | PHOSPHORYLATION | MULTIDISCIPLINARY SCIENCES | KINASE | MESSENGER-RNA EXPORT | PROMOTER | SACCHAROMYCES-CEREVISIAE | Gene Expression Regulation, Fungal | Chromatin - metabolism | Promoter Regions, Genetic | Phosphate Transport Proteins - metabolism | Adenosine Triphosphatases - metabolism | Phosphotransferases (Alcohol Group Acceptor) - genetics | Fungal Proteins - genetics | Nuclear Proteins | Phosphotransferases (Alcohol Group Acceptor) - metabolism | DNA-Binding Proteins - metabolism | Transcription Factors - metabolism | Point Mutation | Saccharomycetales - genetics | Proton-Phosphate Symporters - genetics | Saccharomyces cerevisiae Proteins | Protein Binding | Proton-Phosphate Symporters - metabolism | Transcription, Genetic | Mutation | Inositol Phosphates - metabolism | Phosphate Transport Proteins - genetics | Saccharomycetales - metabolism | Fungal Proteins - metabolism | Inositol phosphates | Usage | Research | Enzymes | Biochemistry | Yeast
Journal Article
Biochemical Journal, ISSN 0264-6021, 08/2012, Volume 445, Issue 3, pp. 413 - 422
In Saccharomyces cerevisiae, the Pho84 phosphate transporter acts as the main provider of phosphate to the cell using a proton symport mechanism, but also...
Protein kinase A | Phosphate binding | Proton binding | Pho84 | Saccharomyces cerevisiae | Phosphate transport | Transceptor | phosphate transport | TRANSPORTER | MECHANISM | MEMBRANE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | INORGANIC-PHOSPHATE | MAJOR FACILITATOR SUPERFAMILY | YEAST | proton binding | MUTANTS | phosphate binding | transceptor | LACTOSE PERMEASE | protein kinase A | ANTIPORTER | Protons | DNA, Fungal - genetics | Saccharomyces cerevisiae - genetics | Molecular Sequence Data | Proton-Phosphate Symporters - chemistry | Saccharomyces cerevisiae - metabolism | Acid Phosphatase - metabolism | Base Sequence | Genes, Fungal | Cyclic AMP-Dependent Protein Kinases - metabolism | Recombinant Proteins - metabolism | Amino Acid Sequence | Mutagenesis, Site-Directed | Signal Transduction | Models, Molecular | Recombinant Proteins - chemistry | Recombinant Proteins - genetics | Binding Sites - genetics | Saccharomyces cerevisiae Proteins - genetics | Sequence Homology, Amino Acid | Phosphates - metabolism | Proton-Phosphate Symporters - genetics | Models, Biological | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Kinetics | Acid Phosphatase - genetics | Amino Acid Substitution | Saccharomyces cerevisiae Proteins - chemistry | Index Medicus | Biological Sciences | Biokemi | Biochemistry | Naturvetenskap | Biokemi och molekylärbiologi | Biologiska vetenskaper | Biochemistry and Molecular Biology | Natural Sciences
Protein kinase A | Phosphate binding | Proton binding | Pho84 | Saccharomyces cerevisiae | Phosphate transport | Transceptor | phosphate transport | TRANSPORTER | MECHANISM | MEMBRANE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | INORGANIC-PHOSPHATE | MAJOR FACILITATOR SUPERFAMILY | YEAST | proton binding | MUTANTS | phosphate binding | transceptor | LACTOSE PERMEASE | protein kinase A | ANTIPORTER | Protons | DNA, Fungal - genetics | Saccharomyces cerevisiae - genetics | Molecular Sequence Data | Proton-Phosphate Symporters - chemistry | Saccharomyces cerevisiae - metabolism | Acid Phosphatase - metabolism | Base Sequence | Genes, Fungal | Cyclic AMP-Dependent Protein Kinases - metabolism | Recombinant Proteins - metabolism | Amino Acid Sequence | Mutagenesis, Site-Directed | Signal Transduction | Models, Molecular | Recombinant Proteins - chemistry | Recombinant Proteins - genetics | Binding Sites - genetics | Saccharomyces cerevisiae Proteins - genetics | Sequence Homology, Amino Acid | Phosphates - metabolism | Proton-Phosphate Symporters - genetics | Models, Biological | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Kinetics | Acid Phosphatase - genetics | Amino Acid Substitution | Saccharomyces cerevisiae Proteins - chemistry | Index Medicus | Biological Sciences | Biokemi | Biochemistry | Naturvetenskap | Biokemi och molekylärbiologi | Biologiska vetenskaper | Biochemistry and Molecular Biology | Natural Sciences
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 10/2009, Volume 106, Issue 43, pp. 18149 - 18154
Cells within a genetically identical population exhibit phenotypic variation that in some cases can persist across multiple generations. However, information...
Yeasts | Cell growth | Phenotypes | Mother cells | Protein synthesis | Genetic variation | Blood cells | Cell lines | Microfluidic devices | Daughter cells | Epigenetics | Protein expression | Yeast | Single cell assay | INDIVIDUAL CELLS | SYSTEM | FLUCTUATING ENVIRONMENTS | MULTIDISCIPLINARY SCIENCES | GLOBAL ANALYSIS | BACTERIAL | SACCHAROMYCES-CEREVISIAE | epigenetics | yeast | YEAST-CELLS | GENE-EXPRESSION | single cell assay | INHERITANCE | protein expression | Microfluidic Analytical Techniques - methods | Saccharomyces cerevisiae - cytology | Saccharomyces cerevisiae - metabolism | Heat-Shock Proteins - genetics | Phenotype | Proton-Phosphate Symporters - genetics | Heat-Shock Proteins - metabolism | Microfluidic Analytical Techniques - instrumentation | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Saccharomyces cerevisiae Proteins - genetics | Epigenetic inheritance | Protein research | Ribosomal proteins | Research | Properties | Biological assay | Gene expression | Methods | Biological Sciences | Physical Sciences
Yeasts | Cell growth | Phenotypes | Mother cells | Protein synthesis | Genetic variation | Blood cells | Cell lines | Microfluidic devices | Daughter cells | Epigenetics | Protein expression | Yeast | Single cell assay | INDIVIDUAL CELLS | SYSTEM | FLUCTUATING ENVIRONMENTS | MULTIDISCIPLINARY SCIENCES | GLOBAL ANALYSIS | BACTERIAL | SACCHAROMYCES-CEREVISIAE | epigenetics | yeast | YEAST-CELLS | GENE-EXPRESSION | single cell assay | INHERITANCE | protein expression | Microfluidic Analytical Techniques - methods | Saccharomyces cerevisiae - cytology | Saccharomyces cerevisiae - metabolism | Heat-Shock Proteins - genetics | Phenotype | Proton-Phosphate Symporters - genetics | Heat-Shock Proteins - metabolism | Microfluidic Analytical Techniques - instrumentation | Saccharomyces cerevisiae Proteins - metabolism | Proton-Phosphate Symporters - metabolism | Saccharomyces cerevisiae Proteins - genetics | Epigenetic inheritance | Protein research | Ribosomal proteins | Research | Properties | Biological assay | Gene expression | Methods | Biological Sciences | Physical Sciences
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