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1. Full Text Catalytic DNA: Scope, Applications, and Biochemistry of Deoxyribozymes
by Silverman, Scott K
Trends in Biochemical Sciences, ISSN 0968-0004, 07/2016, Volume 41, Issue 7, pp. 595 - 609
The discovery of natural RNA enzymes (ribozymes) prompted the pursuit of artificial DNA enzymes (deoxyribozymes) by selection methods. A key motivation is the... 
DNAzyme | DNA enzyme | deoxyribozyme | catalytic DNA | DNA catalyst | DNA, Catalytic - chemistry | DNA, Catalytic - metabolism | Genetic research | Enzymes | Biochemistry | Catalytic RNA | DNA
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2. Full Text Nucleoapzymes: Hemin/G-Quadruplex DNAzyme–Aptamer Binding Site Conjugates with Superior Enzyme-like Catalytic Functions
by Golub, Eyal and Albada, H. Bauke and Liao, Wei-Ching and Biniuri, Yonatan and Willner, Itamar
Journal of the American Chemical Society, ISSN 0002-7863, 01/2016, Volume 138, Issue 1, pp. 164 - 172
A novel concept to improve the catalytic functions of nucleic acids (DNAzymes) is introduced. The method involves the conjugation of a DNA recognition sequence... 
PEROXIDASE-ACTIVITY | COMPLEX | DNA-APTAMER | RNA | LIGANDS | IN-VITRO SELECTION | DOPAMINE | FORCE-FIELD | NANOSTRUCTURES | ESTERASE-ACTIVITY | CHEMISTRY, MULTIDISCIPLINARY | Aptamers, Nucleotide - chemistry | Hemin - chemistry | G-Quadruplexes | DNA, Catalytic - chemistry | Catalysis | Binding Sites
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3. Full Text The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
by Cech, Thomas R and Steitz, Joan A
Cell, ISSN 0092-8674, 03/2014, Volume 157, Issue 1, pp. 77 - 94
Noncoding RNAs (ncRNAs) accomplish a remarkable variety of biological functions. They regulate gene expression at the levels of transcription, RNA processing,... 
SELF-SPLICING RNA | DOUBLE-STRANDED-RNA | MESSENGER-RNA | SMALL NUCLEOLAR RNAS | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION TERMINATION CONTROL | ESCHERICHIA-COLI | GENE-EXPRESSION | 30S RIBOSOMAL-SUBUNIT | COGNATE TRANSFER-RNA | CELL BIOLOGY | Chromatin - metabolism | RNA, Untranslated - metabolism | Humans | RNA, Catalytic - metabolism | Gene Expression Regulation | Ribonucleoproteins - metabolism | RNA, Untranslated - genetics | Animals | RNA, Untranslated - chemistry | Ribonucleoproteins - chemistry | Genome | RNA, Catalytic - chemistry | RNA, Long Noncoding - metabolism | Chromatin - chemistry | Catalytic RNA | Genes | Genomics | Antisense RNA | Genetic transcription | Genetic translation | Telomerase
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4. Full Text Catalytic DNA (deoxyribozymes) for synthetic applications-current abilities and future prospects
by Silverman, Scott K
Chemical Communications, ISSN 1359-7345, 2008, Issue 30, pp. 3467 - 3485
The discovery of naturally occurring catalytic RNA (RNA enzymes, or ribozymes) in the 1980s immediately revised the view of RNA as a passive messenger that... 
CARBON BOND FORMATION | SELF-SPLICING RNA | IN-VITRO SELECTION | SYNTHESIZE BRANCHED RNA | RNA-CLEAVING DEOXYRIBOZYME | ENCODED COMBINATORIAL CHEMISTRY | TEMPLATED ORGANIC-SYNTHESIS | PHOSPHORYLATING DNA | CHEMISTRY, MULTIDISCIPLINARY | CHEMICAL LIBRARIES | NUCLEIC-ACIDS | Oligonucleotides - metabolism | DNA, Catalytic - chemistry | DNA, Catalytic - genetics | Hydroxyl Radical - chemistry | Base Sequence | DNA, Catalytic - metabolism | RNA - chemistry | RNA - metabolism
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5. Full Text Recent developments in oligonucleotide conjugation
by Singh, Yashveer and Murat, Pierre and Defrancq, Eric
Chemical Society Reviews, ISSN 0306-0012, 5/2010, Volume 39, Issue 6, pp. 254 - 27
Synthetic oligonucleotides (ONs) are being investigated for various therapeutic and diagnostic applications. The interest in ONs arises because of their... 
CLICK CHEMISTRY | DNA | SOLID-PHASE | GENERATED TEMPLATES | BOND FORMATION | MOLECULAR BEACONS | CELL-CULTURE | NUCLEIC-ACID THERAPEUTICS | ANTISENSE OLIGONUCLEOTIDES | CHEMISTRY, MULTIDISCIPLINARY | DELIVERY | RNA, Small Interfering - chemistry | Oligonucleotides - chemistry | DNA, Catalytic - chemistry | Nanoparticles - chemistry | RNA Interference | RNA, Catalytic - metabolism | DNA, Catalytic - metabolism | RNA, Catalytic - chemistry | Coordination Complexes - chemistry | RNA, Small Interfering - metabolism | Chemical Sciences
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6. Full Text Catalytic Hairpin Assembly Actuated DNA Nanotweezer for Logic Gate Building and Sensitive Enzyme-Free Biosensing of MicroRNAs
by Li, Dandan and Cheng, Wei and Li, Yujian and Xu, YongJie and Li, Xinmin and Yin, Yibing and Ju, Huangxian and Ding, Shijia
Analytical Chemistry, ISSN 0003-2700, 08/2016, Volume 88, Issue 15, pp. 7500 - 7506
A target-switched DNA nanotweezer is designed for AND logic gate operation and enzyme-free detection of microRNAs (miRNAs) by catalytic hairpin assembly (CHA)... 
CHEMISTRY, ANALYTICAL | TWEEZERS | WALKER | MOLECULE | CANCER | Limit of Detection | Nucleic Acid Hybridization | Computers, Molecular | Salmon | Oligodeoxyribonucleotides - chemistry | DNA - genetics | Sulfonic Acids - chemistry | DNA - chemistry | Animals | DNA, Catalytic - chemistry | MicroRNAs - analysis | Oligodeoxyribonucleotides - genetics | Benzothiazoles - chemistry | Hemin - chemistry | Biosensing Techniques - methods | Logic | Usage | MicroRNA | Research | Biosensors | Gates (Electronics)
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7. Full Text Spontaneous network formation among cooperative RNA replicators
by Vaidya, Nilesh and Manapat, Michael L and Chen, Irene A and Xulvi-Brunet, Ramon and Hayden, Eric J and Lehman, Niles
Nature, ISSN 0028-0836, 11/2012, Volume 491, Issue 7422, pp. 72 - 77
The origins of life on Earth required the establishment of self-replicating chemical systems capable of maintaining and evolving biological information. In an... 
RIBOZYME | ORIGIN | EVOLUTION | NATURAL SELF-ORGANIZATION | MULTIDISCIPLINARY SCIENCES | SYSTEMS | PRINCIPLE | SELECTION | EMERGENCE | HYPERCYCLE | LIFE | Recombinases - metabolism | Biocatalysis | Introns - genetics | Recombinases - genetics | RNA, Catalytic - metabolism | Azoarcus - genetics | RNA, Catalytic - biosynthesis | Molecular Sequence Data | Recombinases - biosynthesis | Origin of Life | Azoarcus - enzymology | Base Pairing | Models, Biological | Base Sequence | Recombinases - chemistry | Models, Genetic | Evolution, Chemical | RNA, Catalytic - genetics | RNA, Catalytic - chemistry | Polymerase chain reaction | Synthesis | Research | RNA | Observations | Catalytic RNA | Optimization techniques
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8. Full Text Engineering a Unimolecular DNA-Catalytic Probe for Single Lead Ion Monitoring
by Wang, Hui and Kim, Youngmi and Liu, Haipeng and Zhu, Zhi and Bamrungsap, Suwussa and Tan, Weihong
Journal of the American Chemical Society, ISSN 0002-7863, 06/2009, Volume 131, Issue 23, pp. 8221 - 8226
The binding of proteins and small molecules by DNA is well established, but more recently, DNA molecules have been selected to catalyze biochemical reactions.... 
RNA HYBRIDIZATION | DNAZYME | RIBOZYMES | ENZYME | CHEMISTRY, MULTIDISCIPLINARY | OLIGONUCLEOTIDES | MOLECULES | Environmental Monitoring | DNA, Catalytic - chemistry | Biosensing Techniques | Fluorescence | Lead - analysis | DNA Probes - chemistry | Chemical Engineering | Usage | Analysis | DNA | Lead | Atomic properties | Catalysis | Chemical properties | Fluorescence microscopy | Index Medicus
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9. Full Text Sensitive and Convenient Detection of microRNAs Based on Cascade Amplification by Catalytic DNAzymes
by Tian, Tian and Xiao, Heng and Zhang, Zhengan and Long, Yuelin and Peng, Shuang and Wang, Shaoru and Zhou, Xiang and Liu, Songmei and Zhou, Xin
Chemistry – A European Journal, ISSN 0947-6539, 01/2013, Volume 19, Issue 1, pp. 92 - 95
On target: We have developed two cascade amplification strategies that combine duplex specific nuclease (DSN) amplicon with either G‐quadruplex‐based DNA... 
DNAzyme | peroxidases | nucleic acids | DSN enzyme | RNA | ISOTHERMAL AMPLIFICATION | SMALL RNAS | ASSAY | MOLECULAR BEACONS | CHEMISTRY, MULTIDISCIPLINARY | SIGNAL AMPLIFICATION | LABEL-FREE | IN-VITRO | RT-PCR | FLUORESCENCE DETECTION | MICROARRAY DETECTION | Nucleic Acid Amplification Techniques - methods | MicroRNAs - administration & dosage | Humans | Peroxides - chemistry | DNA - metabolism | Nucleic Acids | DNA - chemistry | DNA, Catalytic - chemistry | MicroRNAs - analysis | Peroxides - metabolism | MicroRNAs - genetics | Catalysis | DNA, Catalytic - metabolism | MicroRNAs - chemistry | Polymers | Enzymes | MicroRNA
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10. Full Text Regulation of Catalytic DNA Activities with Thermosensitive Gold Nanoparticle Surfaces
by Li, Fengyun and Gao, Qi and Yang, Mingjie and Guo, Weiwei
Langmuir, ISSN 0743-7463, 12/2018, Volume 34, Issue 49, pp. 14932 - 14939
The regulation of the activities of catalytic DNA is of great importance in many applications, especially in biosensing, controllable drug carriers, and gene... 
DRUG | BIOACTIVITY | CELLS | TEMPERATURE | MATERIALS SCIENCE, MULTIDISCIPLINARY | CHEMISTRY, PHYSICAL | NETWORKS | DNAZYMES | CHEMISTRY, MULTIDISCIPLINARY | POLY(N-ISOPROPYLACRYLAMIDE) | MICRORNA | Gold - chemistry | Fluorescent Dyes - chemistry | Temperature | Metal Nanoparticles - chemistry | Acrylic Resins - chemical synthesis | Fluorescence | Acrylic Resins - chemistry | Hydrolysis | Catalysis - drug effects | DNA - chemistry | DNA, Catalytic - chemistry | Base Sequence | Endonucleases
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11. Full Text Catalytic Strategies of Self-Cleaving Ribozymes
by Cochrane, Jesse C and Strobel, Scott A
Accounts of Chemical Research, ISSN 0001-4842, 08/2008, Volume 41, Issue 8, pp. 1027 - 1035
Five naturally occurring nucleolytic ribozymes have been identified: the hammerhead, hairpin, glmS, hepatitis delta virus (HDV), and Varkud satellite (VS)... 
ACID-BASE CATALYSIS | HDV ANTIGENOMIC RIBOZYME | CLEAVAGE SITE | GLMS RIBOZYME | HAMMERHEAD RIBOZYME | VARKUD SATELLITE RIBOZYME | DIVALENT METAL-IONS | ACTIVE-SITE GUANINE | CHEMISTRY, MULTIDISCIPLINARY | DELTA VIRUS RIBOZYME | HAIRPIN RIBOZYME | Protons | Animals | Base Sequence | RNA, Catalytic - metabolism | Oxygen - chemistry | Catalysis | RNA, Catalytic - genetics | RNA, Catalytic - chemistry | Binding Sites | Oxygen - metabolism | Synthesis | Research | RNA | Nucleophiles | Catalytic RNA
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12. Full Text Structure of a group II intron in complex with its reverse transcriptase
by Qu, Guosheng and Kaushal, Prem Singh and Wang, Jia and Shigematsu, Hideki and Piazza, Carol Lyn and Agrawal, Rajendra Kumar and Belfort, Marlene and Wang, Hong-Wei
Nature Structural and Molecular Biology, ISSN 1545-9993, 06/2016, Volume 23, Issue 6, pp. 549 - 557
Bacterial group II introns are large catalytic RNAs related to nuclear spliceosomal introns and eukaryotic retrotransposons. They self-splice, yielding mature... 
PROTEIN | RNA | TELOMERASE | CATALYTIC SUBUNIT TERT | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | TARGET SITE | MATURASE | CELL BIOLOGY | BIOPHYSICS | 3-DIMENSIONAL MODEL | DNA | BINDING-SITE | Catalytic Domain | RNA-Directed DNA Polymerase - metabolism | Lactococcus lactis - chemistry | RNA, Catalytic - metabolism | Bacterial Proteins - chemistry | Models, Molecular | Lactococcus lactis - metabolism | Ribonucleoproteins - metabolism | Cryoelectron Microscopy | RNA, Bacterial - chemistry | RNA-Directed DNA Polymerase - chemistry | Bacterial Proteins - metabolism | Lactococcus lactis - ultrastructure | Protein Conformation | Ribonucleoproteins - chemistry | Nucleic Acid Conformation | RNA, Bacterial - ultrastructure | RNA, Catalytic - chemistry | Ribonucleoproteins - ultrastructure | RNA, Bacterial - metabolism | RNA, Catalytic - ultrastructure | Proteins | Reverse transcriptase | Introns | Properties | Observations | Structure | RNA splicing | Lactococcus | Ribonucleoproteins | Genetic aspects | Catalysts | Microscopy | Molecular structure | Ribonucleic acid--RNA
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