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1. Full Text Long Noncoding RNAs: Cellular Address Codes in Development and Disease
by Batista, Pedro J and Chang, Howard Y
Cell, ISSN 0092-8674, 03/2013, Volume 152, Issue 6, pp. 1298 - 1307
In biology as in real estate, location is a cardinal organizational principle that dictates the accessibility and flow of informational traffic. An essential... 
X-INACTIVATION | MESSENGER-RNAS | SELECTIVE ELIMINATION | HISTONE MODIFICATION | NUCLEAR-BODIES | GENE | CHROMATIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | ANTISENSE RNA | INTERGENIC TRANSCRIPTION | GENOME | CELL BIOLOGY | Animals | Cell Nucleus - genetics | Disease - genetics | RNA, Long Noncoding - chemistry | Humans | Gene Expression Regulation | Cell Nucleus - chemistry | RNA, Long Noncoding - genetics | RNA, Long Noncoding - metabolism
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2. Full Text The Landscape of long noncoding RNA classification
by St. Laurent, Georges and Wahlestedt, Claes and Kapranov, Philipp
Trends in Genetics, ISSN 0168-9525, 2015, Volume 31, Issue 5, pp. 239 - 251
Highlights • ncRNAs constitute the majority of transcriptional output of the human genome. • Lack of functional knowledge of most of ncRNAs has led to... 
Medical Education | systems biology | classification of long non-coding RNAs | lncRNA | transcriptome | lincRNA | vlincRNA | long non-coding RNA | annotation of long non-coding RNAs | function of long non-coding RNAs | LincRNA | VlincRNA | Annotation of long non-coding RNAs | Classification of long non-coding RNAs | Systems biology | Function of long non-coding RNAs | Transcriptome | LncRNA | Long non-coding RNA | HUMAN CELL-TYPES | SINGLE-MOLECULE | PERVASIVE TRANSCRIPTION | TRANSPOSABLE ELEMENTS | MAMMALIAN-CELLS | INTRONIC SEQUENCE RNA | HUMAN GENOME | GENETICS & HEREDITY | GENE-EXPRESSION | DARK-MATTER | HUMAN TRANSCRIPTOME | RNA, Long Noncoding - genetics | Animals | RNA, Long Noncoding - chemistry | RNA, Long Noncoding - classification | Humans | Antisense RNA | Genomics | Cells
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3. Full Text Structure and function of long noncoding RNAs in epigenetic regulation
by Mercer, Tim R and Mattick, John S
Nature Structural and Molecular Biology, ISSN 1545-9993, 03/2013, Volume 20, Issue 3, pp. 300 - 307
Genomes of complex organisms encode an abundance and diversity of long noncoding RNAs (IncRNAs) that are expressed throughout the cell and fulfill a wide... 
SEQUENCES | ANTISENSE TRANSCRIPTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | HOX LOCI | CELL BIOLOGY | ENCODE REGIONS | EVOLUTION | BIOPHYSICS | XIST RNA | BINDING PROTEINS | GENE-EXPRESSION | X-CHROMOSOME INACTIVATION | CHROMATIN MODIFICATION | Proteins - metabolism | RNA, Long Noncoding - chemistry | Epigenesis, Genetic | Humans | Cytoplasm - genetics | DNA - metabolism | RNA, Long Noncoding - physiology | Genome, Human | Binding Sites | RNA, Double-Stranded - chemistry | RNA - metabolism | Physiological aspects | Epigenetic inheritance | Research | RNA | Structure | Protein binding | Epigenetics | Ribonucleic acid--RNA | Molecular biology | Gene expression | Binding sites
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4. Full Text A triple helix stabilizes the 3′ ends of long noncoding RNAs that lack poly(A) tails
by Wilusz, Jeremy E and JnBaptiste, Courtney K and Lu, Laura Y and Kuhn, Claus-D and Joshua-Tor, Leemor and Sharp, Phillip A
Genes and Development, ISSN 0890-9369, 11/2012, Volume 26, Issue 21, pp. 2392 - 2407
The MALAT1 (metastasis-associated lung adenocarcinoma transcript 1) locus is misregulated in many human cancers and produces an abundant long nuclear-retained... 
RNA stability | Translation | MEN β | RNA decay | NEAT1 | MALATL | Uridylation | uridylation | RECOGNITION | TRANSCRIPTION | MEN beta | QUALITY CONTROL | MECHANISMS | DEVELOPMENTAL BIOLOGY | CLEAVAGE | NUCLEAR SPECKLES | CELL BIOLOGY | TELOMERASE RNA | MESSENGER-RNA | GENE | GENETICS & HEREDITY | translation | MALAT1 | Protein Structure, Secondary | RNA, Long Noncoding - chemistry | Humans | RNA, Messenger - genetics | Gene Expression Regulation | Molecular Sequence Data | MicroRNAs - metabolism | RNA, Long Noncoding - genetics | RNA Stability | Amino Acid Motifs | Sequence Alignment | DNA Mutational Analysis | Base Sequence | Plasmids - genetics | Protein Denaturation | RNA 3' End Processing - genetics | HeLa Cells | RNA, Long Noncoding - metabolism | Physiological aspects | Protein biosynthesis | Genetic aspects | MicroRNA | Genetic transcription | Research | Research Paper
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5. Full Text Noncoding RNA NORAD Regulates Genomic Stability by Sequestering PUMILIO Proteins
by Lee, Sungyul and Kopp, Florian and Chang, Tsung-Cheng and Sataluri, Anupama and Chen, Beibei and Sivakumar, Sushama and Yu, Hongtao and Xie, Yang and Mendell, Joshua T
Cell, ISSN 0092-8674, 01/2016, Volume 164, Issue 1-2, pp. 69 - 80
Long noncoding RNAs (lncRNAs) have emerged as regulators of diverse biological processes. Here, we describe the initial functional analysis of a poorly... 
ANEUPLOIDY | PUF FAMILY | INITIATION | LANDSCAPE | BIOCHEMISTRY & MOLECULAR BIOLOGY | BINDING PROTEINS | TRANSCRIPTION | IDENTIFICATION | EXPRESSION | REVEALS | P53 | CELL BIOLOGY | Genomic Instability | Animals | RNA, Long Noncoding - chemistry | Base Sequence | HCT116 Cells | Humans | Ploidies | Mice | RNA, Long Noncoding - genetics | Chromosomal Instability | RNA, Long Noncoding - metabolism | RNA-Binding Proteins - metabolism | Antisense RNA | DNA replication | Binding proteins | DNA damage | Analysis | Protein binding | Molecular biology | Cells
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6. Full Text lncRNAdb v2.0: Expanding the reference database for functional long noncoding RNAs
by Quek, Xiu Cheng and Thomson, Daniel W and Maag, Jesper L. V and Bartonicek, Nenad and Signal, Bethany and Clark, Michael B and Gloss, Brian S and Dinger, Marcel E
Nucleic Acids Research, ISSN 0305-1048, 01/2015, Volume 43, Issue 1, pp. D168 - D173
Despite the prevalence of long noncoding RNA (lncRNA) genes in eukaryotic genomes, only a small proportion have been examined for biological function.... 
EVOLUTION | CERNA | INTEGRATIVE ANNOTATION | GENE | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION | SELECTION | EXPRESSION | GENCODE | GENOME | REVEALS | Proteins - genetics | Gene Expression | Sequence Alignment | RNA, Long Noncoding - chemistry | Base Sequence | Humans | Conserved Sequence | Internet | RNA, Long Noncoding - physiology | Databases, Nucleic Acid | RNA, Long Noncoding - metabolism | Database Issue
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7. Full Text Ribosome Profiling Provides Evidence that Large Noncoding RNAs Do Not Encode Proteins
by Guttman, Mitchell and Russell, Pamela and Ingolia, Nicholas T and Weissman, Jonathan S and Lander, Eric S
Cell, ISSN 0092-8674, 07/2013, Volume 154, Issue 1, pp. 240 - 251
Large noncoding RNAs are emerging as an important component in cellular regulation. Considerable evidence indicates that these transcripts act directly as... 
LINCRNAS | NUCLEOTIDE RESOLUTION | GENE | MECHANISM | HUMAN-CELLS | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSLATION INITIATION | EXPRESSION | GENOME | PRINCIPLES | REVEALS | CELL BIOLOGY | Protein Biosynthesis | Animals | RNA, Untranslated - metabolism | 5' Untranslated Regions | RNA, Long Noncoding - chemistry | Ribosomes - metabolism | Mice | RNA, Long Noncoding - genetics | 3' Untranslated Regions | RNA, Long Noncoding - metabolism | Embryo, Mammalian - metabolism
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8. Full Text The Long Noncoding RNAs NEAT1 and MALAT1 Bind Active Chromatin Sites
by West, Jason A and Davis, Christopher P and Sunwoo, Hongjae and Simon, Matthew D and Sadreyev, Ruslan I and Wang, Peggy I and Tolstorukov, Michael Y and Kingston, Robert E
Molecular Cell, ISSN 1097-2765, 09/2014, Volume 55, Issue 5, pp. 791 - 802
Mechanistic roles for many lncRNAs are poorly understood, in part because their direct interactions with genomic loci and proteins are difficult to assess.... 
SPLICING FACTORS | BREAST-CANCER | CELLS | X-CHROMOSOME | NUCLEAR PARASPECKLES | RELOCATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION | PROTEINS | ESTROGEN-RECEPTOR | P-TEFB | CELL BIOLOGY | Chromatin - metabolism | RNA, Long Noncoding - analysis | Nucleic Acid Hybridization | RNA, Long Noncoding - chemistry | Humans | Transcription, Genetic | Models, Genetic | Binding Sites | RNA, Long Noncoding - metabolism | Molecular biology | Chromatin | Cells
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9. Full Text lincRNAs: Genomics, Evolution, and Mechanisms
by Ulitsky, Igor and Bartel, David P
Cell, ISSN 0092-8674, 07/2013, Volume 154, Issue 1, pp. 26 - 46
Long intervening noncoding RNAs (lincRNAs) are transcribed from thousands of loci in mammalian genomes and might play widespread roles in gene regulation and... 
PROTEIN-CODING GENE | LONG NONCODING RNA | COMPUTATIONAL IDENTIFICATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | WIDE ANALYSIS | ACTIVE CHROMATIN | X-CHROMOSOME INACTIVATION | TRANSCRIPTIONAL NOISE | EXPRESSION | XIST GENE | REVEALS | CELL BIOLOGY | Biological Evolution | Animals | RNA, Long Noncoding - chemistry | Humans | Gene Expression Regulation | Transcription, Genetic | RNA, Long Noncoding - genetics | RNA, Long Noncoding - isolation & purification | RNA, Long Noncoding - metabolism | Evolution, Molecular
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