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1. Full Text Heterologous production of caffeic acid from tyrosine in Escherichia coli
by Rodrigues, J.L and Araújo, R.G and Prather, K.L.J and Kluskens, L.D and Rodrigues, L.R
Enzyme and microbial technology, ISSN 0141-0229, 04/2015, Volume 71, pp. 36 - 44
Tyrosine | p-Coumaric acid | Biosynthesis | Synthetic biology | Caffeic acid | E. coli | P-Coumaric acid | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Rhodopseudomonas - genetics | Cytochrome P-450 Enzyme System - metabolism | Molecular Sequence Data | Escherichia coli K12 - metabolism | Rhodotorula - enzymology | Base Sequence | Actinobacteria - genetics | Recombinant Proteins - metabolism | Genes, Bacterial | Ammonia-Lyases - genetics | Coumaric Acids - metabolism | Bacterial Proteins - genetics | Rhodopseudomonas - enzymology | Ammonia-Lyases - metabolism | Biosynthetic Pathways | Recombinant Proteins - genetics | Actinobacteria - enzymology | Tyrosine - metabolism | DNA, Bacterial - genetics | Genetic Engineering | Propionates | Cytochrome P-450 Enzyme System - genetics | Bacterial Proteins - metabolism | Caffeic Acids - metabolism | Escherichia coli K12 - genetics | Rhodotorula - genetics | Escherichia coli | Index Medicus
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2. Full Text Protein acetylation affects acetate metabolism, motility and acid stress response in Escherichia coli
by Castano-Cerezo, Sara and Bernal, Vicente and Post, Harm and Fuhrer, Tobias and Cappadona, Salvatore and Sanchez-Diaz, Nerea C and Sauer, Uwe and Heck, Albert J. R and Altelaar, A. F. Maarten and Canovas, Manuel
Molecular systems biology, ISSN 1744-4292, 11/2014, Volume 10, Issue 11, pp. 762 - n/a
ACETYLTRANSFERASE PAT | RHODOPSEUDOMONAS-PALUSTRIS | ISOCITRATE DEHYDROGENASE | LYSINE ACETYLATION | SACCHAROMYCES-CEREVISIAE | COA SYNTHETASE | isocitrate lyase | SALMONELLA-ENTERICA | SUBSTRATE-SPECIFICITY | sirtuin | OVERFLOW METABOLISM | flagella biosynthesis | TRANSCRIPTIONAL REGULATION | metabolic regulation | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Acetyltransferases - metabolism | Oligonucleotide Array Sequence Analysis | Stress, Physiological | Acetyltransferases - genetics | DNA-Binding Proteins - metabolism | Acetate-CoA Ligase - genetics | Acetylation | Sirtuins - genetics | Escherichia coli - physiology | Acetates - metabolism | Bacterial Proteins - genetics | Escherichia coli Proteins - metabolism | Glutamate Decarboxylase - genetics | Chromosome Mapping | DNA-Binding Proteins - genetics | Glyoxylates - metabolism | Acetate-CoA Ligase - metabolism | Escherichia coli - genetics | Proteomics | Escherichia coli Proteins - genetics | Glutamate Decarboxylase - metabolism | Bacterial Proteins - metabolism | Protein Processing, Post-Translational | Gene Expression Regulation, Bacterial | Sirtuins - metabolism | Peptides | Biosynthesis | Experiments | Isocitrate lyase | Protein turnover | Proteins | Clonal deletion | E coli | Metabolites | Bacteria | Physiology | Acetyltransferase | Stress response | Deoxyribonucleic acid--DNA | Growth conditions | Enzymes | Glycerol | RNA polymerase | Metabolism | Gene expression | Carbon | Substrates | Mutants | DNA biosynthesis | Studies | Acids | Deacetylation | Flagella | Acetic acid | Fitness | Index Medicus
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3. Full Text Rhodopseudomonas palustris CGA010 proteome implicates extracytoplasmic function sigma factor in stress response
by Allen, Michael S and Hurst, Gregory B and Lu, Tse-Yuan S and Perry, Leslie M and Pan, Chongle and Lankford, Patricia K and Pelletier, Dale A and Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Journal of proteome research, ISSN 1535-3893, 05/2015, Volume 14, Issue 5, pp. 2158 - 2168
Rhodopseudomonas palustris | stress | ECF σ factor | proteomics | gene regulation | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Sigma Factor - metabolism | Proteome - genetics | DNA, Bacterial - metabolism | Rhodopseudomonas - genetics | Molecular Sequence Data | Glucosyltransferases - metabolism | Tandem Mass Spectrometry | Protein Isoforms - metabolism | Nucleotide Motifs | Chromatography, Liquid | Conserved Sequence | Sigma Factor - isolation & purification | Transcription, Genetic | Sigma Factor - genetics | Binding Sites | Proteome - isolation & purification | Glucosyltransferases - genetics | Promoter Regions, Genetic | Catalase - genetics | Operon | Stress, Physiological - genetics | Bacterial Proteins - genetics | Catalase - metabolism | Sequence Alignment | DNA, Bacterial - genetics | Rhodopseudomonas - metabolism | Protein Binding | Bacterial Proteins - metabolism | Gene Expression Regulation, Bacterial | Bacterial Proteins - isolation & purification | Proteome - metabolism | Protein Isoforms - genetics | Index Medicus | BASIC BIOLOGICAL SCIENCES
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4. Full Text Mutation design of a thermophilic Rubisco based on three‐dimensional structure enhances its activity at ambient temperature
by Fujihashi, Masahiro and Nishitani, Yuichi and Kiriyama, Tomohiro and Aono, Riku and Sato, Takaaki and Takai, Tomoyuki and Tagashira, Kenta and Fukuda, Wakao and Atomi, Haruyuki and Imanaka, Tadayuki and Miki, Kunio
Proteins, structure, function, and bioinformatics, ISSN 0887-3585, 10/2016, Volume 84, Issue 10, pp. 1339 - 1346
crystal structure | protein engineering | ribulose‐1,5‐bisphosphate carboxylase/oxygenase | protein‐ligand complex | carbon dioxide fixation | protein-ligand complex | ribulose-1,5-bisphosphate carboxylase/oxygenase | Biochemistry & Molecular Biology | Biophysics | Life Sciences & Biomedicine | Science & Technology | Rhodopseudomonas - chemistry | Thermococcus - genetics | Rhodopseudomonas - genetics | Archaeal Proteins - chemistry | Bacterial Proteins - chemistry | Ribulose-Bisphosphate Carboxylase - genetics | Crystallography, X-Ray | Structure-Activity Relationship | Thermococcus - enzymology | Plant Proteins - chemistry | Spinacia oleracea - genetics | Cloning, Molecular | Escherichia coli - metabolism | Protein Engineering | Archaeal Proteins - genetics | Plant Proteins - metabolism | Archaeal Proteins - metabolism | Protein Structure, Tertiary | Recombinant Proteins - metabolism | Amino Acid Sequence | Ribulose-Bisphosphate Carboxylase - chemistry | Gene Expression | Protein Structure, Secondary | Thermococcus - chemistry | Bacterial Proteins - genetics | Rhodopseudomonas - enzymology | Models, Molecular | Recombinant Proteins - chemistry | Recombinant Proteins - genetics | Plasmids - metabolism | Sequence Homology, Amino Acid | Plant Proteins - genetics | Ribulose-Bisphosphate Carboxylase - metabolism | Sequence Alignment | Escherichia coli - genetics | Plasmids - chemistry | Spinacia oleracea - chemistry | Bacterial Proteins - metabolism | Kinetics | Mutation | Spinacia oleracea - enzymology | Enzymes | Analysis | Crystals | Genetic aspects | Photosynthesis | Structure | Sugars | Monosaccharides | Index Medicus
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5. Full Text An integrated semiconductor device enabling non-optical genome sequencing
by Rothberg, Jonathan M and Hinz, Wolfgang and Rearick, Todd M and Schultz, Jonathan and Mileski, William and Davey, Mel and Leamon, John H and Johnson, Kim and Milgrew, Mark J and Edwards, Matthew and Hoon, Jeremy and Simons, Jan F and Marran, David and Myers, Jason W and Davidson, John F and Branting, Annika and Nobile, John R and Puc, Bernard P and Light, David and Clark, Travis A and Huber, Martin and Branciforte, Jeffrey T and Stoner, Isaac B and Cawley, Simon E and Lyons, Michael and Fu, Yutao and Homer, Nils and Sedova, Marina and Miao, Xin and Reed, Brian and Sabina, Jeffrey and Feierstein, Erika and Schorn, Michelle and Alanjary, Mohammad and Dimalanta, Eileen and Dressman, Devin and Kasinskas, Rachel and Sokolsky, Tanya and Fidanza, Jacqueline A and Namsaraev, Eugeni and McKernan, Kevin J and Williams, Alan and Roth, G. Thomas and Bustillo, James
Nature (London), ISSN 0028-0836, 07/2011, Volume 475, Issue 7356, pp. 348 - 352
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Diverse techniques | Molecular and cellular biology | Semiconductors | Vibrio - genetics | Humans | Rhodopseudomonas - genetics | Male | Genome, Human - genetics | Genome, Bacterial - genetics | Genomics - instrumentation | Sequence Analysis, DNA - instrumentation | Escherichia coli - genetics | Light | Genomics - methods | Sequence Analysis, DNA - methods | Usage | DNA | Physiological aspects | Genomes | Research | Nucleotide sequencing | Integrated circuits | Signal processing | Sensors | Arrays | Index Medicus
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6. Full Text The genome sequence of the giant phototrophic gammaproteobacterium Thiospirillum jenense gives insight into its physiological properties and phylogenetic relationships
by Imhoff, Johannes F and Meyer, Terrance E and Kyndt, John A
Archives of microbiology, ISSN 0302-8933, 01/2021, Volume 203, Issue 1, pp. 97 - 105
Genome, Bacterial - genetics | Photosynthesis - genetics | Base Composition | Comamonadaceae - genetics | Photosynthetic Reaction Center Complex Proteins - genetics | Rhodopseudomonas - genetics | Chromatiaceae - classification | Comamonadaceae - classification | Nitrogenase - genetics | Phylogeny | Chromatiaceae - genetics | Rhodopseudomonas - classification | Genomics | Analysis | Cytochrome oxidase | Genetic aspects | Genomes | Photosynthesis | Sulfates | Cytochrome | Tricarboxylic acid cycle | Reductases | Cell culture | Cytology | Carbon dioxide | Ribulose-bisphosphate carboxylase | Nucleotides | Sulfur oxidation | Cell morphology | Calvin cycle | Hydrogenase | Proteins | Carbon dioxide fixation | Bacteria | Oxidation | Sulfur | Sulfate reduction | Nucleotide sequence | Amino acid sequence | Malate dehydrogenase | Globular clusters | Carbon cycle | Malate | Contaminants | Morphology | Nitrogenase | Cytochromes | New species | Cell size | Flagella | Index Medicus
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7. Full Text Small near-infrared photochromic protein for photoacoustic multi-contrast imaging and detection of protein interactions in vivo
by Li, Lei and Shemetov, Anton A and Baloban, Mikhail and Hu, Peng and Zhu, Liren and Shcherbakova, Daria M and Zhang, Ruiying and Shi, Junhui and Yao, Junjie and Wang, Lihong V and Verkhusha, Vladislav V
Nature communications, ISSN 2041-1723, 12/2018, Volume 9, Issue 1, pp. 2734 - 14
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Molecular Imaging - instrumentation | Brain Neoplasms - diagnostic imaging | Humans | Rhodopseudomonas - genetics | Brain Neoplasms - pathology | Spectroscopy, Near-Infrared - methods | Brain Neoplasms - metabolism | Deinococcus - metabolism | Deinococcus - genetics | Photoacoustic Techniques - instrumentation | Heterografts | Tomography - methods | Liver - diagnostic imaging | Escherichia coli - metabolism | HEK293 Cells | Protein Engineering | Tomography - instrumentation | Photoacoustic Techniques - methods | Female | Recombinant Proteins - metabolism | Gene Expression | Liver - metabolism | Bacterial Proteins - genetics | Brain Neoplasms - genetics | Molecular Imaging - methods | Recombinant Proteins - genetics | Plasmids - metabolism | Protein Interaction Mapping | Animals | Rhodopseudomonas - metabolism | Escherichia coli - genetics | Mice, Nude | Plasmids - chemistry | Cell Line, Tumor | Bacterial Proteins - metabolism | Mice | Spectroscopy, Near-Infrared - instrumentation | Medical imaging | Photochromism | Spatial discrimination | I.R. radiation | Proteins | Genetic code | Sensitivity | Computed tomography | Coding | Imaging | Complementation | Protein interaction | Spatial resolution | Tumors | Index Medicus
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8. Full Text System-wide studies of N-lysine acetylation in Rhodopseudomonas palustris reveal substrate specificity of protein acetyltransferases
by Crosby, Heidi A and Pelletier, Dale A and Hurst, Gregory B and Escalante-Semerena, Jorge C
The Journal of biological chemistry, ISSN 0021-9258, 05/2012, Volume 287, Issue 19, pp. 15590 - 15601
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Amino Acid Sequence | Acetyltransferases - metabolism | Electrophoresis, Polyacrylamide Gel | Rhodopseudomonas - genetics | Bacterial Proteins - genetics | Rhodopseudomonas - enzymology | Molecular Sequence Data | Substrate Specificity | Glyceraldehyde-3-Phosphate Dehydrogenases - genetics | Acetyltransferases - genetics | Sequence Homology, Amino Acid | Lysine - genetics | Acetate-CoA Ligase - genetics | Acetate-CoA Ligase - metabolism | Mass Spectrometry | Chromatography, Liquid | Bacterial Proteins - metabolism | Isomerases - genetics | Lysine - metabolism | Acetylation | Glyceraldehyde-3-Phosphate Dehydrogenases - metabolism | Isomerases - metabolism | Index Medicus | Microbiology | Bacterial Metabolism | Lysine Acylation | Protein Acetyltransferases | Metabolic Regulation | Protein Chemical Modification | Proteomics | Enzyme Specificity | AMP-forming Acyl-CoA Synthetases | Carbon Metabolism | Protein Acylation
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9. Full Text Engineered Deinococcus radiodurans R1 with NiCoT genes for bioremoval of trace cobalt from spent decontamination solutions of nuclear power reactors
by Gogada, Raghu and Singh, Surya Satyanarayana and Lunavat, Shanti Kumari and Pamarthi, Maruthi Mohan and Rodrigue, Agnes and Vadivelu, Balaji and Phanithi, Prakash-Babu and Gopala, Venkateswaran and Apte, Shree Kumar
Applied microbiology and biotechnology, ISSN 0175-7598, 11/2015, Volume 99, Issue 21, pp. 9203 - 9213
Life Sciences | Bioengineering | Biotechnology | NiCoT genes | Microbiology | Microbial Genetics and Genomics | Nuclear power reactors | Trace cobalt removal | Bioremediation | Spent decontamination solutions (SDS) | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Metabolic Engineering | Recombinant Proteins - metabolism | Solutions - metabolism | Rhodopseudomonas - genetics | Transcriptional Activation - drug effects | Rhodopseudomonas - enzymology | Gene Expression Profiling | Nuclear Power Plants | Recombinant Proteins - genetics | Environmental Pollutants - metabolism | Microbial Viability | Deinococcus - metabolism | Deinococcus - genetics | Membrane Transport Proteins - genetics | Sphingomonadaceae - enzymology | Membrane Transport Proteins - metabolism | Sphingomonadaceae - genetics | Cobalt Radioisotopes - metabolism | Real-Time Polymerase Chain Reaction | Usage | Escherichia coli | Physiological aspects | Genetic research | Genetic engineering | Nuclear reactors | Research | Cobalt | Studies | Genes | Analysis | Bacteria | Index Medicus | Microbiology and Parasitology | Biochemistry, Molecular Biology | Genomics | Biomolecules | Molecular biology | Bacteriology
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