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1. Full Text NODULE INCEPTION Directly Targets NF-Y Subunit Genes to Regulate Essential Processes of Root Nodule Development in Lotus japonicus
by Soyano, Takashi and Kouchi, Hiroshi and Hirota, Atsuko and Hayashi, Makoto
PLoS Genetics, ISSN 1553-7390, 2013, Volume 9, Issue 3, p. e1003352
The interactions of legumes with symbiotic nitrogen-fixing bacteria cause the formation of specialized lateral root organs called root nodules. It has been... 
TRANSCRIPTION FACTORS | MEDICAGO-TRUNCATULA | RHIZOBIAL INFECTION | GENETICS & HEREDITY | FUNCTIONAL-ANALYSIS | CELL-CYCLE | NODULATION FACTORS | INTRACELLULAR ACCOMMODATION | SYMBIOTIC SIGNALS | GRAS PROTEINS | KINASE GENE | Root Nodules, Plant - metabolism | Signal Transduction | CCAAT-Binding Factor - genetics | Root Nodules, Plant - microbiology | Root Nodules, Plant - genetics | Organogenesis | Symbiosis - genetics | Biological Evolution | Plant Proteins - genetics | CCAAT-Binding Factor - metabolism | Fabaceae - metabolism | Gene Expression Regulation, Plant | Loteae - growth & development | Plant Proteins - metabolism | Transcription Factors | Fabaceae - genetics | Root Nodules, Plant - growth & development | Loteae - genetics | Transcription factors | Plant physiology | Plant genetics | Development | Genetic aspects | Research | Plants | Identification and classification | Testing | Symbiosis | Proteins | Cell division | Legumes | Kinases
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2. Full Text The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus
by Madsen, Lene H and Tirichine, Leïla and Jurkiewicz, Anna and Sullivan, John T and Heckmann, Anne B and Bek, Anita S and Ronson, Clive W and James, Euan K and Stougaard, Jens
Nature Communications, ISSN 2041-1723, 2010, Volume 1, Issue 1, pp. 10 - 12
Bacterial infection of interior tissues of legume root nodules is controlled at the epidermal cell layer and is closely coordinated with progressing organ... 
SESBANIA-ROSTRATA | MEDICAGO-TRUNCATULA | MESORHIZOBIUM-LOTI | INTERCELLULAR INVASION | CA2+ SPIKING | MULTIDISCIPLINARY SCIENCES | FUNGAL SYMBIOSIS | DEPENDENT PROTEIN-KINASE | CALCIUM SPIKING | TRANSCRIPTION FACTOR | ROOT HAIRS | Microscopy, Electron, Transmission | Root Nodules, Plant - metabolism | Plants, Genetically Modified - growth & development | Loteae - metabolism | Root Nodules, Plant - microbiology | Gene Expression Regulation, Plant - genetics | Genotype | Loteae - microbiology | Alphaproteobacteria - physiology | Alphaproteobacteria - growth & development | Loteae - ultrastructure | Plant Proteins - genetics | Plants, Genetically Modified - ultrastructure | Plants, Genetically Modified - metabolism | Plants, Genetically Modified - microbiology | Gene Expression Regulation, Plant - physiology | Root Nodules, Plant - ultrastructure | Loteae - growth & development | Plant Proteins - metabolism | Root Nodules, Plant - growth & development
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3. Full Text Plant Peptides Govern Terminal Differentiation of Bacteria in Symbiosis
by Willem van de Velde and Grigor Zehirov and Agnes Szatmari and Monika Debreczeny and Hironobu Ishihara and Zoltan Kevei and Attila Farkas and Kata Mikulass and Andrea Nagy and Hilda Tiricz and Beatrice Satiat-Jeunemaître and Benoit Alunni and Mickael Bourge and Ken-ichi Kucho and Mikiko Abe and Attila Kereszt and Gergely Maroti and Toshiki Uchiumi and Eva Kondorosi and Peter Mergaert
Science, ISSN 0036-8075, 2/2010, Volume 327, Issue 5969, pp. 1122 - 1126
Legume plants host nitrogen-fixing endosymbiotic Rhizobium bacteria in root nodules. In Medicago truncatula, the bacteria undergo an irreversible (terminal)... 
Symbiosis | Legumes | Polyploidy | B lymphocytes | Antimicrobials | Cell cycle | Bacteria | Reports | Cellular immunity | Bacteroids | Nodules | ORGANIZATION | NODULES | LEGUME SYMBIOSIS | MEDICAGO-TRUNCATULA | MULTIDISCIPLINARY SCIENCES | GENES | CELL-CYCLE | ANTIMICROBIAL PEPTIDES | MODEL | RHIZOBIUM-MELILOTI | Medicago truncatula - genetics | Root Nodules, Plant - metabolism | Sinorhizobium meliloti - drug effects | Genes, Plant | Sinorhizobium meliloti - physiology | Peptides - genetics | Root Nodules, Plant - microbiology | Molecular Sequence Data | Medicago truncatula - microbiology | Peptides - metabolism | Plant Proteins - chemistry | Cell Division | Plants, Genetically Modified | Cell Membrane - metabolism | Plant Proteins - metabolism | Nitrogen Fixation | Amino Acid Sequence | Peptides - chemistry | Loteae - metabolism | Loteae - microbiology | Medicago truncatula - metabolism | Peptides - pharmacology | Protein Transport | Plant Proteins - genetics | Sinorhizobium meliloti - cytology | Cytosol - metabolism | Anti-Bacterial Agents - pharmacology | Loteae - genetics | Host-bacteria relationships | Physiological aspects | Research | Peptides | Plant physiology | Endosymbiosis | Mutation | Botany | Cell Membrane | Medicago truncatula | Lotus | Cytosol | Life Sciences | Anti-Bacterial Agents | Root Nodules, Plant | Plant Proteins | Vegetal Biology | Sinorhizobium meliloti
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4. Full Text A gene expression atlas of the model legume Medicago truncatula
by Benedito, Vagner A and Torres‐Jerez, Ivone and Murray, Jeremy D and Andriankaja, Andry and Allen, Stacy and Kakar, Klementina and Wandrey, Maren and Verdier, Jérôme and Zuber, Hélène and Ott, Thomas and Moreau, Sandra and Niebel, Andreas and Frickey, Tancred and Weiller, Georg and He, Ji and Dai, Xinbin and Zhao, Patrick X and Tang, Yuhong and Udvardi, Michael K
The Plant Journal, ISSN 0960-7412, 08/2008, Volume 55, Issue 3, pp. 504 - 513
Legumes played central roles in the development of agriculture and civilization, and today account for approximately one‐third of the world’s primary crop... 
Medicago truncatula | development | nodule | seed | transcriptome | Development | Seed | Nodule | Transcriptome | GLOBAL CHANGES | FAMILY | PLANT SCIENCES | NODULATION | ARABIDOPSIS TRANSCRIPTION FACTORS | NITROGEN-FIXATION | ARBUSCULAR MYCORRHIZAL SYMBIOSIS | REGULATORS | RICH | GENOME-WIDE IDENTIFICATION | Symbiosis | Gene Expression | Medicago truncatula - genetics | Plant Roots - metabolism | Root Nodules, Plant - metabolism | Oligonucleotide Array Sequence Analysis | Species Specificity | Genomics | Sinorhizobium meliloti - physiology | Root Nodules, Plant - microbiology | Databases, Genetic | Plant Roots - genetics | Root Nodules, Plant - genetics | Gene Expression Profiling | Medicago truncatula - microbiology | Medicago truncatula - metabolism | Plant Roots - microbiology | RNA, Messenger - metabolism | Plant Leaves - genetics | Plant Leaves - metabolism | Plant Leaves - microbiology | Cluster Analysis | Nitrogen Fixation | Legumes | Beans | Gene expression | Mimosaceae | Analysis | Models | Botany
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5. Full Text MtSWEET11, a Nodule-Specific Sucrose Transporter of Medicago truncatula
by Igor S. Kryvoruchko and Senjuti Sinharoy and Ivone Torres-Jerez and Davide Sosso and Catalina I. Pislariu and Dian Guan and Jeremy Murray and Vagner A. Benedito and Wolf B. Frommer and Michael K. Udvardi and Carnegie Inst. of Science, Stanford, CA (United States)
Plant Physiology, ISSN 0032-0889, 5/2016, Volume 171, Issue 1, pp. 554 - 565
Optimization of nitrogen fixation by rhizobia in legumes is a key area of research for sustainable agriculture. Symbiotic nitrogen fixation (SNF) occurs in... 
MEMBRANES, TRANSPORT AND BIOENERGETICS | Plant Roots - metabolism | Root Nodules, Plant - metabolism | Root Nodules, Plant - microbiology | Symbiosis - physiology | Medicago truncatula - metabolism | Plant Roots - microbiology | Rhizobium - physiology | Carrier Proteins - genetics | Plant Proteins - genetics | Carrier Proteins - metabolism | Meristem - genetics | Plants, Genetically Modified | Gene Expression Regulation, Plant | Sucrose - metabolism | Meristem - metabolism | Cell Membrane - metabolism | Plant Proteins - metabolism | Mutation | Legumes | Botanical research | Beans | Fixation | Biological transport | Physiological aspects | Research | Nitrogen | Mimosaceae | BASIC BIOLOGICAL SCIENCES
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6. Full Text A Gain-of-Function Mutation in a Cytokinin Receptor Triggers Spontaneous Root Nodule Organogenesis
by Leïla Tirichine and Niels Sandal and Lene H. Madsen and Simona Radutoiu and Anita S. Albrektsen and Shusei Sato and Erika Asamizu and Satoshi Tabata and Jens Stougaard
Science, ISSN 0036-8075, 1/2007, Volume 315, Issue 5808, pp. 104 - 107
Legume root nodules originate from differentiated cortical cells that reenter the cell cycle and form organ primordia. We show that perception of the... 
Cytokinins | Receptors | Root nodules | Genes | Plant roots | Stem cells | Nodulation | Reports | Plants | Nodules | Plant cells | SIGNAL-TRANSDUCTION | NODULATION | PERCEPTION | MUTANTS | CHASE DOMAIN | GENE | MULTIDISCIPLINARY SCIENCES | KINASE | LEGUME LOTUS-JAPONICUS | ARABIDOPSIS | EXPRESSION | Protein Kinases - metabolism | Meristem - cytology | Protein Kinases - genetics | Root Nodules, Plant - metabolism | Calcium - metabolism | Genes, Plant | Lipopolysaccharides - metabolism | Molecular Sequence Data | Protein Kinases - chemistry | Cytokinins - pharmacology | Purines | Cell Division | Plants, Genetically Modified | Gene Expression Regulation, Plant | Receptors, Cell Surface - chemistry | Root Nodules, Plant - growth & development | Loteae - physiology | Nitrogen Fixation | Transformation, Genetic | Amino Acid Sequence | Plant Roots - metabolism | Signal Transduction | Benzyl Compounds | Loteae - metabolism | Receptors, Cell Surface - metabolism | Plant Roots - cytology | Root Nodules, Plant - cytology | Amino Acid Motifs | Histidine Kinase | Escherichia coli - genetics | Alleles | Kinetin - pharmacology | Cytokinins - metabolism | Mutation | Loteae - genetics | Receptors, Cell Surface - genetics | Plant cells and tissues | Research | Analysis | Mutation (Biology) | Legumes | Signal transduction | Gene expression | Molecular biology | Botany
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7. Full Text Receptor-mediated exopolysaccharide perception controls bacterial infection
by Kawaharada, Y and Kelly, S and Nielsen, M. Wibroe and Hjuler, C.T and Gysel, K and Muszyński, A and Carlson, R.W and Thygesen, M.B and Sandal, N and Asmussen, M.H and Vinther, M and Andersen, S.U and Krusell, L and Thirup, S and Jensen, K.J and Ronson, C.W and Blaise, M and Radutoiu, S and Stougaard, J
Nature, ISSN 0028-0836, 07/2015, Volume 523, Issue 7560, pp. 308 - 312
Surface polysaccharides are important for bacterial interactions with multicellular organisms, and some are virulence factors in pathogens. In the... 
ORGAN DEVELOPMENT | SINORHIZOBIUM-MELILOTI | GENETIC-LINKAGE MAP | MEDICAGO-TRUNCATULA | MULTIDISCIPLINARY SCIENCES | LEGUME LOTUS-JAPONICUS | STRUCTURAL-CHARACTERIZATION | NODULE ORGANOGENESIS | HOST-SYMBIONT INTERACTIONS | RHIZOBIUM-MELILOTI | INNATE IMMUNITY | Protein Kinases - metabolism | Protein Kinases - genetics | Root Nodules, Plant - metabolism | Species Specificity | Root Nodules, Plant - microbiology | Lipopolysaccharides - metabolism | Molecular Sequence Data | Protein Kinases - chemistry | Suppression, Genetic - genetics | Plant Epidermis - metabolism | Plant Proteins - chemistry | Receptors, Cell Surface - chemistry | Plant Proteins - metabolism | Carbohydrate Sequence | Protein Structure, Tertiary | Symbiosis | Amino Acid Sequence | Signal Transduction | Loteae - metabolism | Receptors, Cell Surface - metabolism | Loteae - microbiology | Mutation - genetics | Plant Epidermis - microbiology | Plant Proteins - genetics | Rhizobium - metabolism | Phenotype | Plant Root Nodulation | Lipopolysaccharides - chemistry | Loteae - genetics | Receptors, Cell Surface - genetics | Legumes | Bacterial infections | Mutation | Kinases | Genes | Life Sciences
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8. Full Text The High-Affinity Phosphate Transporter GmPT5 Regulates Phosphate Transport to Nodules and Nodulation in Soybean
by Lu Qin and Jing Zhao and Jiang Tian and Liyu Chen and Zhaoan Sun and Yongxiang Guo and Xing Lu and Mian Gu and Guohua Xu and Hong Liao
Plant Physiology, ISSN 0032-0889, 8/2012, Volume 159, Issue 4, pp. 1634 - 1643
Legume biological nitrogen (N) fixation is the most important N source in agroecosystems, but it is also a process requiring a considerable amount of... 
Phosphates | Legumes | Yeasts | Soybeans | Sustainable agriculture | Plant roots | Nodulation | Plants | Transgenic plants | ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS | Nodules | PHOSPHORUS DEFICIENCY | NITROGEN-FIXATION | AGRICULTURAL SYSTEMS | GENE | KINETIC-PROPERTIES | PLANTS | CARBON COSTS | PISUM-SATIVUM | PHT1 FAMILY | RICE | PLANT SCIENCES | Root Nodules, Plant - metabolism | Glucuronidase - metabolism | Phosphate Transport Proteins - metabolism | Molecular Sequence Data | Root Nodules, Plant - genetics | Rhizobium - physiology | Soybeans - genetics | Saccharomyces cerevisiae - metabolism | Soybeans - growth & development | Plant Root Nodulation - physiology | Biological Transport | Plant Root Nodulation - genetics | RNA Interference | Plants, Genetically Modified | Gene Expression Regulation, Plant | Biological Assay | Plant Proteins - metabolism | Phosphate Transport Proteins - genetics | Nitrogen - metabolism | Solubility | Plant Proteins - genetics | Phosphates - metabolism | Genes, Plant - genetics | Phosphorus - metabolism | Hydroponics | Soybeans - microbiology | Soybeans - physiology | Suppression, Genetic | Biological transport | Plant genetics | Physiological aspects | Genetic aspects | Soybean | Research
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9. Full Text Soybean miR172c Targets the Repressive AP2 Transcription Factor NNC1 to Activate ENOD40 Expression and Regulate Nodule Initiation
by Youning Wang and Lixiang Wang and Yanmin Zou and Liang Chen and Zhaoming Cai and Senlei Zhang and Fang Zhao and Yinping Tian and Qiong Jiang and Brett J. Ferguson and Peter M. Gresshoff and Xia Li
The Plant Cell, ISSN 1040-4651, 12/2014, Volume 26, Issue 12, pp. 4782 - 4801
MicroRNAs are noncoding RNAs that act as master regulators to modulate various biological processes by posttranscriptionally repressing their target genes.... 
Soybeans | MicroRNA | RESEARCH ARTICLES | Genes | Plant roots | Nodulation | Infections | Plants | Family members | Nodules | Plant cells | SIGNAL | RESPONSE REGULATORS | SUCROSE SYNTHASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | MEDIATED TRANSFORMATION | MICRORNAS | PLANT SCIENCES | CELL BIOLOGY | RECEPTOR KINASE | NODULATION | AGROBACTERIUM-RHIZOGENES | GENE-EXPRESSION | SYMBIOSIS | Transcription Factors - physiology | Root Nodules, Plant - metabolism | Signal Transduction | Molecular Sequence Data | Root Nodules, Plant - genetics | MicroRNAs - metabolism | Bradyrhizobium - physiology | Transcription Factors - genetics | Soybeans - genetics | Soybeans - metabolism | Transcription Factors - metabolism | Sequence Alignment | Sequence Analysis, RNA | Plant Root Nodulation - genetics | Base Sequence | Soybeans - microbiology | Gene Expression Regulation, Plant | MicroRNAs - genetics | MicroRNAs - physiology | Botanical research | Protein research | Transcription factors | Physiological aspects | Genetic aspects | Soybean | Research | Gene expression
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10. Full Text Medicago LINC Complexes Function in Nuclear Morphology, Nuclear Movement, and Root Nodule Symbiosis
by Newman-Griffis, Anna H and Newman-Griffis, Anna H and del Cerro, Pablo and Del Cerro, Pablo and Charpentier, Myriam and Charpentier, Myriam and Meier, Iris and Meier, Iris
Plant Physiology, ISSN 0032-0889, 02/2019, Volume 179, Issue 2, pp. 491 - 506
Nuclear movement is involved in cellular and developmental processes across eukaryotic life, often driven by Linker of Nucleoskeleton and Cytoskeleton (LINC)... 
PLANT | SHAPE | CYTOSKELETON | ACTIN | HAIRS | TRUNCATULA | ENVELOPE | INFECTION | PROTEINS | SUN | PLANT SCIENCES | Medicago - physiology | Symbiosis | Root Nodules, Plant - metabolism | Medicago - cytology | Tobacco - metabolism | Actins - metabolism | Multiprotein Complexes - genetics | Genome, Plant | Root Nodules, Plant - physiology | Protein Interaction Maps | Multiprotein Complexes - metabolism | Nuclear Envelope - metabolism | Plant Proteins - genetics | Biological Transport | Tobacco - genetics | Plants, Genetically Modified | Gene Expression Regulation, Plant | Plant Proteins - metabolism | Nuclear Matrix - metabolism | Plant proteins | Legumes | Beans | Analysis | Physiological aspects | Roots (Botany) | Nuclear matrix | Mimosaceae
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11. Full Text Strigolactones promote nodulation in pea
by Eloise Foo and Noel W. Davies
Planta, ISSN 0032-0935, 11/2011, Volume 234, Issue 5, pp. 1073 - 1081
Strigolactones are recently defined plant hormones with roles in mycorrhizal symbiosis and shoot and root architecture. Their potential role in controlling... 
Branching | Peas | Rootstocks | Plant roots | RAPID COMMUNICATION | Nodulation | Graftage | Plants | Acetates | Scions | Nodules | Life Sciences | Shoot–root signaling | Forestry | Strigolactones | Ecology | Agriculture | GR24 | Plant Sciences | Pea | Grafting | Shoot-root signaling | RMS1 MUTANT | ROOT PARASITIC PLANTS | ARBUSCULAR MYCORRHIZAL FUNGI | GIBBERELLIN | COLONIZATION | CYTOKININ | PLANT SCIENCES | AUXIN | ETHYLENE | INHIBITION | MUTATION | Plant Shoots - physiology | Plant Exudates - analysis | Plant Growth Regulators - isolation & purification | Root Nodules, Plant - metabolism | Lactones - isolation & purification | Peas - physiology | Peas - drug effects | Lactones - analysis | Lactones - metabolism | Root Nodules, Plant - physiology | Lactones - pharmacology | Plant Growth Regulators - chemistry | Phenotype | Plant Root Nodulation | Plant Shoots - metabolism | Plant Shoots - drug effects | Root Nodules, Plant - drug effects | Plant Growth Regulators - metabolism | Plant Exudates - chemistry | Peas - chemistry | Peas - metabolism | Plant Growth Regulators - analysis | Root Nodules, Plant - chemistry | Lactones - chemistry | Architecture | Plant hormones
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12. Full Text LjMOT1, a high‐affinity molybdate transporter from Lotus japonicus, is essential for molybdate uptake, but not for the delivery to nodules
by Duan, Guilan and Hakoyama, Tsuneo and Kamiya, Takehiro and Miwa, Hiroki and Lombardo, Fabien and Sato, Shusei and Tabata, Satoshi and Chen, Zheng and Watanabe, Toshihiro and Shinano, Takuro and Fujiwara, Toru
The Plant Journal, ISSN 0960-7412, 06/2017, Volume 90, Issue 6, pp. 1108 - 1119
Molybdenum (Mo) is an essential nutrient for plants, and is required for nitrogenase activity of legumes. However, the pathways of Mo uptake from soils and... 
molybdate transporter | nodule | Lotus japonicus | nitrogen fixation | molybdenum | TRANSFORMATION | ARABIDOPSIS-THALIANA | MOLYBDENUM COFACTOR | YIELD | BIOLOGICAL NITROGEN-FIXATION | PLANT SCIENCES | METABOLISM | ROOT-NODULES | TOMATO PLANTS | NITRATE REDUCTASE | SULFUR DEFICIENCY | Plant Roots - metabolism | Root Nodules, Plant - metabolism | Plants, Genetically Modified - genetics | Molybdenum - metabolism | Loteae - metabolism | Plant Roots - genetics | Root Nodules, Plant - genetics | Nitrogen Fixation - physiology | Plant Proteins - genetics | Nitrogen Fixation - genetics | Plants, Genetically Modified - metabolism | Gene Expression Regulation, Plant | Biological Transport - genetics | Biological Transport - physiology | Plant Proteins - metabolism | Loteae - genetics | Legumes | Beans | Fixation | Codon | Gene mutations | Plants | Nucleotide sequencing | Nitrogen | Mimosaceae | Molybdenum | DNA sequencing | Yeast | Molybdate | Homology | Accumulation | Gene sequencing | Cotyledons | Inoculation | Genotypes | Deoxyribonucleic acid--DNA | Nucleotide sequence | Nodulation | Stop codon | Nodules | Progeny | Soils | Plant growth | Nitrogenase | Point mutation | Genetic crosses | Affinity | Mutation | Ethyl methanesulfonate | Transporter | Index Medicus
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13. Full Text Silencing the Flavonoid Pathway in Medicago truncatula Inhibits Root Nodule Formation and Prevents Auxin Transport Regulation by Rhizobia
by Anton P. Wasson and Flavia I. Pellerone and Ulrike Mathesius
The Plant Cell, ISSN 1040-4651, 7/2006, Volume 18, Issue 7, pp. 1617 - 1629
Legumes form symbioses with rhizobia, which initiate the development of a new plant organ, the nodule. Flavonoids have long been hypothesized to regulate... 
Legumes | Flavonoids | Inoculation | Plant roots | Fluorescence | Nodulation | Auxins | Root hairs | Plants | Nodules | RNA INTERFERENCE | ARABIDOPSIS-THALIANA | MELILOTI NODULATION GENES | PHENOLIC-COMPOUNDS | BIOCHEMISTRY & MOLECULAR BIOLOGY | WHITE CLOVER | PLANT SCIENCES | CELL BIOLOGY | RECEPTOR KINASE | CHALCONE SYNTHASE | LOTUS-JAPONICUS | RHIZOGENES-TRANSFORMED ROOTS | ISOFLAVONE SYNTHASE | Transformation, Genetic | Plant Roots - metabolism | Root Nodules, Plant - metabolism | Indoleacetic Acids - metabolism | Gene Silencing | Molecular Sequence Data | Acyltransferases - metabolism | Medicago truncatula - anatomy & histology | Medicago truncatula - metabolism | Acyltransferases - genetics | Recombinant Fusion Proteins - metabolism | Rhizobium - genetics | Rhizobium - metabolism | Phenotype | RNA Interference | Flavonoids - metabolism | Plant Roots - chemistry | Plant Roots - anatomy & histology | Recombinant Fusion Proteins - genetics | Root Nodules, Plant - anatomy & histology | Auxin | Flavones | Bioflavonoids | Analysis | Rhizobium | Genetic aspects
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