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Cell, ISSN 0092-8674, 07/2018, Volume 174, Issue 3, pp. 716 - 729.e27
Single-cell RNA sequencing technologies suffer from many sources of technical noise, including under-sampling of mRNA molecules, often termed “dropout,” which... 
single-cell RNA sequencing | regulatory networks | imputation | EMT | manifold learning | HETEROGENEITY | MAPS | BIOCHEMISTRY & MOLECULAR BIOLOGY | NETWORKS | EXPRESSION | SEQ | CELL BIOLOGY | RNA sequencing | Computer science | Biotechnology | Medical research | Anopheles | Messenger RNA | Analysis | Genes | Stem cells | Medicine, Experimental | Genetic transcription | Research institutes | Index Medicus
Journal Article
Genome Biology, ISSN 1474-7596, 10/2010, Volume 11, Issue 10, pp. R106 - R106
High-throughput sequencing assays such as RNA-Seq, ChIP-Seq or barcode counting provide quantitative readouts in the form of count data. To infer differential... 
NEGATIVE BINOMIAL DISPERSION | RNA-SEQ | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | PACKAGE | GENETICS & HEREDITY | BIOCONDUCTOR | Index Medicus | Method
Journal Article
Bioinformatics, ISSN 1367-4803, 10/2012, Volume 28, Issue 20, pp. 2678 - 2679
Motivation: The sequence alignment/map (SAM) and the binary alignment/map (BAM) formats have become the standard method of representation of nucleotide... 
RNA-SEQ | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | READS | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Sequence Alignment - standards | Algorithms | Genomics | Humans | High-Throughput Nucleotide Sequencing | Software | Quality Control | Index Medicus
Journal Article
Algorithms for Molecular Biology, ISSN 1748-7188, 11/2013, Volume 8, Issue 1, pp. 25 - 25
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2013, Volume 41, Issue 1, pp. D56 - D63
The Encyclopedia of DNA Elements (ENCODE), http://encodeproject.org, has completed its fifth year of scientific collaboration to create a comprehensive catalog... 
CHROMATIN-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | DISCOVERY | CHIP-SEQ EXPERIMENTS | TRANSCRIPTION | Animals | Genomics | Humans | Databases, Genetic | Mice | Software | Internet | Genome, Human | Index Medicus
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 2016, Volume 44, Issue 1, pp. D209 - D215
Circular RNAs (circRNAs) represent a new type of regulatory noncoding RNA that only recently has been identified and cataloged. Emerging evidence indicates... 
ABUNDANT | EVOLUTION | BIOGENESIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENE-EXPRESSION | MECHANISMS | IDENTIFICATION | EFFICIENT | SEQ | MICRORNA | REVEALS | Sequence Analysis, RNA | Humans | Gene Expression Profiling | Gene Regulatory Networks | RNA - chemistry | Databases, Nucleic Acid | RNA - metabolism | Index Medicus | Database Issue
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 2014, Volume 10, Issue 4, pp. e1003531 - e1003531
Journal Article