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Nature Methods, ISSN 1548-7091, 03/2015, Volume 12, Issue 4, pp. 357 - 360
HISAT (hierarchical indexing for spliced alignment of transcripts) is a highly efficient system for aligning reads from RNA sequencing experiments. HISAT uses... 
TRANSCRIPTOMES | TOPHAT | ALIGNMENT | GENE | ANNOTATION | BIOCHEMICAL RESEARCH METHODS | RNA-SEQ EXPERIMENTS | READS | Sequence Alignment - methods | Sequence Analysis, DNA - instrumentation | Limit of Detection | Pseudogenes - genetics | Sequence Analysis, RNA | Humans | RNA sequencing | Genetic research | Research | Genomics | Innovations | Ribonucleic acid--RNA | Genomes
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 6/2010, Volume 107, Issue 24, pp. 11110 - 11115
Journal Article
The Plant Cell, ISSN 1040-4651, 8/2011, Volume 23, Issue 8, pp. 2831 - 2849
Arabidopsis thaliana BOTRYTIS-INDUCED KINASE1 (BIK1) regulates immune responses to a distinct class of pathogens. Here, mechanisms underlying BIK1 function and... 
Pathogens | Phosphorylation | Receptors | Immune response | Plant growth | Plant growth regulators | Gene expression regulation | Plants | Seedlings | Plant cells | DEFENSE RESPONSES | BIOCHEMISTRY & MOLECULAR BIOLOGY | NECROTROPHIC FUNGAL PATHOGENS | AGROBACTERIUM-MEDIATED TRANSFORMATION | SYSTEMIC ACQUIRED-RESISTANCE | PROTEIN-KINASES | PLANT SCIENCES | CELL BIOLOGY | RECEPTOR KINASE | SALICYLIC-ACID | TRANSCRIPTION FACTOR | DISEASE RESISTANCE | HYPERSENSITIVE RESPONSE | Plant Immunity | Arabidopsis - enzymology | Hypocotyl - genetics | Salicylic Acid - metabolism | Plant Diseases - immunology | Arabidopsis - immunology | Molecular Sequence Data | Seedlings - genetics | Plant Diseases - microbiology | Seedlings - enzymology | Botrytis - physiology | Ethylenes - metabolism | Arabidopsis Proteins - metabolism | Flagellin - pharmacology | Seedlings - immunology | Gene Expression Regulation, Plant | Conserved Sequence | Botrytis - immunology | Protein-Serine-Threonine Kinases - metabolism | Pseudomonas syringae - physiology | Amino Acid Sequence | Plants, Genetically Modified - physiology | Arabidopsis Proteins - genetics | Amino Acids, Cyclic - pharmacology | Plants, Genetically Modified - genetics | Plants, Genetically Modified - immunology | Plants, Genetically Modified - enzymology | Protein-Serine-Threonine Kinases - genetics | Hypocotyl - physiology | Hypocotyl - enzymology | Arabidopsis - genetics | Arabidopsis - microbiology | Oxylipins - metabolism | Hypocotyl - immunology | Phenotype | Arabidopsis Proteins - chemistry | Seedlings - physiology | Cyclopentanes - metabolism | Signal Transduction - physiology | Protein-Serine-Threonine Kinases - chemistry | Mutation | Plant Growth Regulators - metabolism | Arabidopsis thaliana | Plant genetics | Physiological aspects | Genetic aspects | Biochemistry | Research | Growth (Plants) | Phosphotransferases
Journal Article