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Nucleic Acids Research, ISSN 0305-1048, 07/2014, Volume 42, Issue 1, pp. W119 - W123
CopraRNA (Comparative prediction algorithm for small RNA targets) is the most recent asset to the Freiburg RNA Tools webserver. It incorporates and extends the... 
MESSENGER-RNAS | BACTERIA | ALIGNMENT | NONCODING RNAS | CYANOBACTERIA | BIOCHEMISTRY & MOLECULAR BIOLOGY | ACCESSIBILITY | SOLUBLE-RNAS | SEQ | TOOL | Algorithms | Sequence Analysis, RNA | RNA, Bacterial - chemistry | RNA, Small Untranslated - chemistry | Software | Internet | Gene Regulatory Networks | RNA, Bacterial - metabolism | RNA, Small Untranslated - metabolism | Index Medicus
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 11/2018, Volume 46, Issue 19, pp. 9971 - 9989
Abstract A precise understanding of the genomic organization into transcriptional units and their regulation is essential for our comprehension of... 
MOLECULAR CHARACTERIZATION | GROESL OPERON | BACILLUS-SUBTILIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENE-EXPRESSION | TRANSFER-RNA | BINDING PROTEIN | MICROBIAL GENOMES | SOLUBLE-RNAS | LACTOCOCCUS-LACTIS | PNEUMOCOCCAL VIRULENCE | Index Medicus | Data Resources and Analyses
Journal Article
Current Opinion in Microbiology, ISSN 1369-5274, 2014, Volume 19, Issue 1, pp. 97 - 105
Journal Article
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, ISSN 0002-9637, 2019, Volume 100, Issue 6, pp. 1328 - 1334
The diarrheal disease "cholera" is caused by Vibrio cholerae, and is primarily confined to endemic regions, mostly inAfrica and Asia. It is punctuated by... 
DIAGNOSIS | INFECTIONS | PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH | PCR INHIBITORS | OUTBREAKS | EL-TOR STRAINS | RNOMICS | CANDIDATES | IDENTIFICATION | SOLUBLE-RNAS | TROPICAL MEDICINE | NON-MESSENGER RNAS | Pathogens
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 02/2019, Volume 47, Issue 4, pp. 1759 - 1773
Abstract Bacterial type I toxin-antitoxin (TA) systems are widespread, and consist of a stable toxic peptide whose expression is monitored by a labile RNA... 
GENOME SEQUENCE | MESSENGER-RNA | DETERMINANTS | BIOCHEMISTRY & MOLECULAR BIOLOGY | SYSTEMS | INDUCTION | VIRULENCE | SOLUBLE-RNAS | EXPRESSION | PEPTIDE | INSIGHTS | Life Sciences | Microbiology and Parasitology | Biochemistry, Molecular Biology | Genomics | Bacteriology | Gene regulation, Chromatin and Epigenetics
Journal Article
Molecular Microbiology, ISSN 0950-382X, 06/2019, Volume 111, Issue 6, pp. 1476 - 1492
Erwinia amylovora , the causative agent of fire blight disease of apple and pear trees, causes disease on flowers by invading natural openings at the base of... 
OXIDATIVE STRESS | PROTEIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | MICROBIOLOGY | INFECTION | IDENTIFICATION | VIRULENCE | SOLUBLE-RNAS | EXPRESSION | BINDING | BIOFILM FORMATION | Nectar | Motility | Transcription | Stigmas (botany) | Blight | Swimming | Flowers | Flagella
Journal Article
Cell Reports, ISSN 2211-1247, 05/2018, Volume 23, Issue 5, pp. 1543 - 1552
Hfq is an RNA chaperone and an important post-transcriptional regulator in bacteria. Using chromatin immunoprecipitation coupled with high-throughput DNA... 
Pseudomonas aeruginosa | Hfq | ChIP | Crc | gene regulation | sRNA | VISUALIZATION | MESSENGER-RNA TARGETS | PSEUDOMONAS-AERUGINOSA | CATABOLITE REPRESSION | ESCHERICHIA-COLI | GLOBAL REGULATOR | TRANSLATION | SOLUBLE-RNAS | BINDING | E. COLI | CELL BIOLOGY
Journal Article
Molecular Microbiology, ISSN 0950-382X, 02/2019, Volume 111, Issue 2, pp. 473 - 486
GcvB small RNA is described as post‐transcriptional regulator of 1–2% of all mRNAs in Escherichia coli and Salmonella Typhimurium. At least 24 GcvB:mRNA... 
GLYCINE | PROTEIN | GENE | METABOLISM | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | MICROBIOLOGY | IDENTIFICATION | TRANSLATION | SOLUBLE-RNAS | BINDING | TRANSPORTER MESSENGER-RNAS | RNA sequencing | RNA | Escherichia coli | Growth conditions | Salmonella | Purification | Ribonucleic acids | Ribonuclease E | Transcription | Nutrient availability | Gene sequencing
Journal Article