2012, ISBN 1421404796, xi, 358
Book
2011, Forestry sciences, ISBN 9789400715981, Volume 80., x, 319 pages
"Found in every plant species, the diversity of endophytic micro-organisms can be extremely high within different plant organs and tissue types. In trees,...
Trees | Arbres | Relations plante-champignon | Microbiology | Microbiologie | Plant-microbe relationships | Endophytes | Plant-fungus relationships | Relations plante-micro-organisme | Biology, life sciences | Life Sciences | Microbial Ecology | Plant Biochemistry | Tree Biology | Biodiversity | Forestry | Symbiosis
Trees | Arbres | Relations plante-champignon | Microbiology | Microbiologie | Plant-microbe relationships | Endophytes | Plant-fungus relationships | Relations plante-micro-organisme | Biology, life sciences | Life Sciences | Microbial Ecology | Plant Biochemistry | Tree Biology | Biodiversity | Forestry | Symbiosis
Book
Ecology, ISSN 0012-9658, 12/2010, Volume 91, Issue 12, pp. 3664 - 3674
A trade-off between growth and mortality rates characterizes tree species in closed canopy forests. This trade-off is maintained by inherent differences among...
growth rates | leaf mass per area | maximum height | Barro Colorado Island | Panama | seed mass | seed size | wood density | maximum size | mortality rates | Trees | Average linear density | Mortality | Forest ecology | Plant ecology | Growth traits | Saplings | Plants | Species | Forest trees | Seed mass | Maximum size | Growth rates | Seed size | Leaf mass per area | Wood density | Mortality rates | Maximum height | RECRUITMENT | ALLOMETRY | SHADE TOLERANCE | FOREST | PLANT TRAITS | DIMENSIONS | CONSERVATION | GOOD PREDICTORS | ECOLOGY | LEAF | INTERSPECIFIC VARIATION | Trees - physiology | Seeds - physiology | Tropical Climate | Ecosystem | Biomass | Trees - growth & development | Plant Leaves - physiology | Physiological aspects | Research | Growth | Forests | Growth rate | Wood | Interspecific | Tropical forests | Shade | Trade | Demographics | Canopies | Predictions | Foliage | Variation
growth rates | leaf mass per area | maximum height | Barro Colorado Island | Panama | seed mass | seed size | wood density | maximum size | mortality rates | Trees | Average linear density | Mortality | Forest ecology | Plant ecology | Growth traits | Saplings | Plants | Species | Forest trees | Seed mass | Maximum size | Growth rates | Seed size | Leaf mass per area | Wood density | Mortality rates | Maximum height | RECRUITMENT | ALLOMETRY | SHADE TOLERANCE | FOREST | PLANT TRAITS | DIMENSIONS | CONSERVATION | GOOD PREDICTORS | ECOLOGY | LEAF | INTERSPECIFIC VARIATION | Trees - physiology | Seeds - physiology | Tropical Climate | Ecosystem | Biomass | Trees - growth & development | Plant Leaves - physiology | Physiological aspects | Research | Growth | Forests | Growth rate | Wood | Interspecific | Tropical forests | Shade | Trade | Demographics | Canopies | Predictions | Foliage | Variation
Journal Article
2010, ISBN 0470526858, xii, 215
"Recent computational and modeling advances have produced methods for estimating species trees directly, avoiding the problems and limitations of the...
Trees | Variation | Mathematical models
Trees | Variation | Mathematical models
Book
Systematic Biology, ISSN 1063-5157, 10/2011, Volume 60, Issue 5, pp. 661 - 667
In this study, we develop a distance method for inferring unrooted species trees from a collection of unrooted gene trees. The species tree is estimated by the...
Biological taxonomies | Internodes | Phylogenetics | Genetic loci | Topology | Phylogeny | Species | Consistent estimators | We they distinction | Estimation methods | species tree | Coalescent theory | gene tree | neighbor joining | MAXIMUM-LIKELIHOOD | DNA-SEQUENCES | PHYLOGENIES | DIVERGENCE TIMES | INFERENCE | MRBAYES | DISTRIBUTIONS | EVOLUTIONARY BIOLOGY | BOOTSTRAP | BAYESIAN-ESTIMATION | Biological Evolution | Computational Biology - methods | Computer Simulation | Bayes Theorem | Models, Genetic | Saccharomyces - classification | Saccharomyces - genetics
Biological taxonomies | Internodes | Phylogenetics | Genetic loci | Topology | Phylogeny | Species | Consistent estimators | We they distinction | Estimation methods | species tree | Coalescent theory | gene tree | neighbor joining | MAXIMUM-LIKELIHOOD | DNA-SEQUENCES | PHYLOGENIES | DIVERGENCE TIMES | INFERENCE | MRBAYES | DISTRIBUTIONS | EVOLUTIONARY BIOLOGY | BOOTSTRAP | BAYESIAN-ESTIMATION | Biological Evolution | Computational Biology - methods | Computer Simulation | Bayes Theorem | Models, Genetic | Saccharomyces - classification | Saccharomyces - genetics
Journal Article
Ecology, ISSN 0012-9658, 06/2015, Volume 96, Issue 6, pp. 1529 - 1539
Negative plant-soil feedbacks can impair seedling survival near conspecific trees and may enhance forest diversity. However, the reciprocal aspect of this...
ectomycorrhiza | temperate forest | diversity | Fagus | pathogens | Quercus | recruitment | mildew | plant-soil feedback | seedling | Trees | Species diversity | Pathogens | Negative feedback | Seedling emergence | Grassland soils | Forest soils | Seedlings | Inoculum | Soil ecology | plant–soil feedback | Seedling | Diversity | Plant-soil feedback | Ectomycorrhiza | Mildew | Temperate forest | Recruitment | SURVIVORSHIP | MORTALITY | LIGHT GRADIENT | COMMUNITIES | FORESTS | DISEASES | GROWTH | PRODUCTIVITY | ECOLOGY | Oak | Plant-soil relationships | Research | Plant spacing | Beech | Forest dynamics
ectomycorrhiza | temperate forest | diversity | Fagus | pathogens | Quercus | recruitment | mildew | plant-soil feedback | seedling | Trees | Species diversity | Pathogens | Negative feedback | Seedling emergence | Grassland soils | Forest soils | Seedlings | Inoculum | Soil ecology | plant–soil feedback | Seedling | Diversity | Plant-soil feedback | Ectomycorrhiza | Mildew | Temperate forest | Recruitment | SURVIVORSHIP | MORTALITY | LIGHT GRADIENT | COMMUNITIES | FORESTS | DISEASES | GROWTH | PRODUCTIVITY | ECOLOGY | Oak | Plant-soil relationships | Research | Plant spacing | Beech | Forest dynamics
Journal Article
2009, ISBN 9780199570300, xvi, 245 p., [8] p. of plates
Animal life, now and over the past half billion years, is incredibly diverse. Describing and understanding the evolution of this diversity of body plans — from...
evolutionary biology | Evolution (Biology) | Evolution | Systematics | Evo-devo | Genomes | Metazoa
evolutionary biology | Evolution (Biology) | Evolution | Systematics | Evo-devo | Genomes | Metazoa
Book
Diversity and Distributions, ISSN 1366-9516, 7/2013, Volume 19, Issue 7/8, pp. 1093 - 1094
The global database of invasive trees and shrubs (Richardson & Rejmánek, 2011; Diversity Distrib. 17, 788-809) has been updated, resulting in a total of 751...
Trees | Coastal ecology | Invasive species | Geographic regions | Databases | Ecological invasion | Shrubs | Biological invasions | Species | Applied ecology | BIODIVERSITY LETTER | shrub invasion | tree invasion | regions of origin | global database | Shrub invasion | Tree invasion | Global database | Regions of origin | ECOLOGY | BIODIVERSITY CONSERVATION
Trees | Coastal ecology | Invasive species | Geographic regions | Databases | Ecological invasion | Shrubs | Biological invasions | Species | Applied ecology | BIODIVERSITY LETTER | shrub invasion | tree invasion | regions of origin | global database | Shrub invasion | Tree invasion | Global database | Regions of origin | ECOLOGY | BIODIVERSITY CONSERVATION
Journal Article
Systematic Biology, ISSN 1063-5157, 9/1997, Volume 46, Issue 3, pp. 523 - 536
Exploration of the relationship between gene trees and their containing species trees leads to consideration of how to reconstruct species trees from gene...
Biological taxonomies | Extinct species | Genes | Phylogenetics | Evolutionary genetics | Genetic loci | Gene duplication | Phylogeny | Species | Speciation | Lineage sorting | Biogeography | Hybridization | Coevolution | Gene trees | Species trees | Tree reconciliation | Horizontal transfer | Gene genealogy | Parsimony | Species concepts | Evolution | Coalescence | CLADOGRAMS | NATURAL-POPULATIONS | SEQUENCES | K CX BIOLOGY, MISCELLANEOUS | GENEALOGY | hybridization | species trees | gene genealogy | BIOLOGY, MISCELLANEOUS | tree reconciliation | coevolution | gene duplication | gene trees | RECOMBINATION | coalescence | biogeography | horizontal transfer | parsimony | evolution | SEGREGATION | ORGANISMS | lineage sorting | SYSTEMATICS | phylogeny | species concepts
Biological taxonomies | Extinct species | Genes | Phylogenetics | Evolutionary genetics | Genetic loci | Gene duplication | Phylogeny | Species | Speciation | Lineage sorting | Biogeography | Hybridization | Coevolution | Gene trees | Species trees | Tree reconciliation | Horizontal transfer | Gene genealogy | Parsimony | Species concepts | Evolution | Coalescence | CLADOGRAMS | NATURAL-POPULATIONS | SEQUENCES | K CX BIOLOGY, MISCELLANEOUS | GENEALOGY | hybridization | species trees | gene genealogy | BIOLOGY, MISCELLANEOUS | tree reconciliation | coevolution | gene duplication | gene trees | RECOMBINATION | coalescence | biogeography | horizontal transfer | parsimony | evolution | SEGREGATION | ORGANISMS | lineage sorting | SYSTEMATICS | phylogeny | species concepts
Journal Article
Molecular Biology and Evolution, ISSN 0737-4038, 08/2012, Volume 29, Issue 8, pp. 1917 - 1932
The multispecies coalescent provides an elegant theoretical framework for estimating species trees and species demographics from genetic markers. However,...
SNAPP | effective population size | multispecies coalescent | SNP | species trees | AFLP | MAXIMUM-LIKELIHOOD-ESTIMATION | PHYLOGENY | DNA-SEQUENCES | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENEALOGY | MODEL | POPULATION DIVERGENCE TIMES | DISTRIBUTIONS | EVOLUTIONARY BIOLOGY | GENETICS & HEREDITY | BAYESIAN-INFERENCE | Digitalis - genetics | New Zealand | Likelihood Functions | Algorithms | Species Specificity | Genes, Plant - genetics | Computer Simulation | Alleles | Databases, Genetic | Genetic Markers | Phylogeny | Amplified Fragment Length Polymorphism Analysis
SNAPP | effective population size | multispecies coalescent | SNP | species trees | AFLP | MAXIMUM-LIKELIHOOD-ESTIMATION | PHYLOGENY | DNA-SEQUENCES | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENEALOGY | MODEL | POPULATION DIVERGENCE TIMES | DISTRIBUTIONS | EVOLUTIONARY BIOLOGY | GENETICS & HEREDITY | BAYESIAN-INFERENCE | Digitalis - genetics | New Zealand | Likelihood Functions | Algorithms | Species Specificity | Genes, Plant - genetics | Computer Simulation | Alleles | Databases, Genetic | Genetic Markers | Phylogeny | Amplified Fragment Length Polymorphism Analysis
Journal Article
Systematic Biology, ISSN 1063-5157, 01/2015, Volume 64, Issue 1, pp. e42 - e62
Abstract This article reviews the various models that have been used to describe the relationships between gene trees and species trees. Molecular phylogeny...
gene transfer | dynamic programming | hybridization | Algorithm | birth-death model | coalescent | species tree | gene loss | gene duplication | gene tree | maximum likelihood | phylogenetics | amalgamation | Bayesian inference | DNA-SEQUENCES | EVOLUTIONARY TREES | DUPLICATION | BAYESIAN-ESTIMATION | SCALE COESTIMATION | RECOMBINATION | MAXIMUM-LIKELIHOOD | ALGORITHMS | MODEL | GENOME | EVOLUTIONARY BIOLOGY | Phylogeny | Mutation - genetics | Models, Biological | Computer Simulation | Genetic Speciation | Genome - genetics | Life Sciences | Quantitative Methods | Bioinformatics | Computer Science | birth–death model | Mathematical and Computational Evolutionary Biology | Special Issue
gene transfer | dynamic programming | hybridization | Algorithm | birth-death model | coalescent | species tree | gene loss | gene duplication | gene tree | maximum likelihood | phylogenetics | amalgamation | Bayesian inference | DNA-SEQUENCES | EVOLUTIONARY TREES | DUPLICATION | BAYESIAN-ESTIMATION | SCALE COESTIMATION | RECOMBINATION | MAXIMUM-LIKELIHOOD | ALGORITHMS | MODEL | GENOME | EVOLUTIONARY BIOLOGY | Phylogeny | Mutation - genetics | Models, Biological | Computer Simulation | Genetic Speciation | Genome - genetics | Life Sciences | Quantitative Methods | Bioinformatics | Computer Science | birth–death model | Mathematical and Computational Evolutionary Biology | Special Issue
Journal Article