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by Campbell, Joshua D and Yau, Christina and Bowlby, Reanne and Liu, Yuexin and Brennan, Kevin and Fan, Huihui and Taylor, Alison M and Wang, Chen and Walter, Vonn and Akbani, Rehan and Byers, Lauren Averett and Creighton, Chad J and Coarfa, Cristian and Cherniack, Andrew D and Gevaert, Olivier and Prunello, Marcos and Shen, Hui and Chen, Jianhong and Cheng, Hui and Hayes, D. Neil and Bullman, Susan and Pedamallu, Chandra Sekhar and Ojesina, Akinyemi I and Mungall, Karen L and Hegde, Apurva and Diao, Lixia and Ma, Wencai and Sumazin, Pavel and Chen, Ting-Wen and Zuna, Rosemary and Al-Ahmadie, Hikmat and Zhou, Jane H and Drill, Esther and Wong, Christopher K and Stuart, Joshua M and Laird, Peter W and Hoadley, Katherine A and Weinstein, John N and Peto, Myron and Pickering, Curtis R and Chen, Zhong and Van Waes, Carter and Caesar-Johnson, Samantha J and Ferguson, Martin L and Tarnuzzer, Roy and Wang, Zhining and Zenklusen, Jean C and Chudamani, Sudha and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Kim, Jaegil and Lawrence, Michael S and Lin, Pei and Noble, Michael S and Saksena, Gordon and Voet, Doug and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Miller, Michael and Reynolds, Sheila and Hegde, Apurva M and Ju, Zhenlin and Korkut, Anil and Li, Jun and Liang, Han and Ling, Shiyun and Lu, Yiling and Mills, Gordon B and Ng, Kwok-Shing and Rao, Arvind and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and de Bruijn, Ino and Gao, Jianjiong and Gross, Benjamin E and Heins, Zachary J and Kundra, Ritika and La, Konnor and Ladanyi, Marc and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Sanchez-Vega, Francisco and Sander, Chris and Schultz, Nikolaus and Sumer, S. Onur and Sun, Yichao and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Cell reports (Cambridge), ISSN 2211-1247, 04/2018, Volume 23, Issue 1, pp. 194 - 212.e6
Journal Article
Gastroenterology (New York, N.Y. 1943), ISSN 0016-5085, 12/2015, Volume 149, Issue 7, pp. 1700 - 1715
Esophageal squamous cell carcinoma (ESCC) is one of the most aggressive squamous cell carcinomas and is highly prevalent in Asia. Alcohol and its metabolite,... 
Gastroenterology and Hepatology | Field Cancerization | Genetic Polymorphism | Squamous Differentiation | Aldehyde Dehydrogenase 2 | Acetaldehyde | Gastroenterology & Hepatology | Life Sciences & Biomedicine | Science & Technology | Smoking - adverse effects | Predictive Value of Tests | Life Style | Carcinoma, Squamous Cell - genetics | Carcinoma, Squamous Cell - metabolism | Carcinoma, Squamous Cell - pathology | Carcinoma, Squamous Cell - virology | Humans | Esophageal Neoplasms - epidemiology | Esophageal Neoplasms - pathology | Cell Transformation, Neoplastic - genetics | Esophageal Neoplasms - metabolism | Biomarkers, Tumor - metabolism | Papillomavirus Infections - virology | Esophageal Neoplasms - therapy | Esophageal Squamous Cell Carcinoma | Genetic Predisposition to Disease | Signal Transduction | Carcinoma, Squamous Cell - epidemiology | Papillomavirus Infections - epidemiology | Risk Factors | Carcinoma, Squamous Cell - therapy | Treatment Outcome | Combined Modality Therapy | Alcohol Drinking - adverse effects | Cell Transformation, Neoplastic - metabolism | Esophageal Neoplasms - virology | Animals | Esophageal Neoplasms - genetics | Alcohol Drinking - epidemiology | Smoking - epidemiology | Biomarkers, Tumor - genetics | Cell Transformation, Neoplastic - pathology | Neoplasm Staging | Medical research | Enzymes | Squamous cell carcinoma | PET imaging | Genomics | Clinical trials | Cell differentiation | Genetic polymorphisms | Fanconi's anemia | Chemotherapy | Metabolites | Medicine, Experimental | Endoscopy | Tumor proteins | Health aspects | Esophageal cancer | Cancer | Index Medicus | Abridged Index Medicus
Journal Article
Nature communications, ISSN 2041-1723, 07/2018, Volume 9, Issue 1, pp. 2724 - 13
Identifying tumor antigen-specific T cells from cancer patients has important implications for immunotherapy diagnostics and therapeutics. Here, we show that... 
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Antigens, CD - immunology | CD8-Positive T-Lymphocytes - pathology | Adenocarcinoma of Lung - pathology | Carcinoma, Squamous Cell - genetics | Carcinoma, Squamous Cell - pathology | Humans | Squamous Cell Carcinoma of Head and Neck - pathology | Ovarian Neoplasms - pathology | Transcriptome | Male | Receptors, Antigen, T-Cell, alpha-beta - immunology | Squamous Cell Carcinoma of Head and Neck - mortality | Ovarian Neoplasms - mortality | Antigens, CD - genetics | Squamous Cell Carcinoma of Head and Neck - immunology | Ovarian Neoplasms - genetics | Adenocarcinoma of Lung - mortality | Adenocarcinoma of Lung - genetics | Carcinoma, Squamous Cell - mortality | Melanoma - genetics | Integrin alpha Chains - immunology | Female | Adenocarcinoma of Lung - immunology | Apyrase - immunology | Immunophenotyping | Melanoma - pathology | Carcinoma, Squamous Cell - immunology | Receptors, Antigen, T-Cell, alpha-beta - genetics | CD8 Antigens - immunology | Squamous Cell Carcinoma of Head and Neck - genetics | Lymphocytes, Tumor-Infiltrating - pathology | Melanoma - immunology | Apyrase - genetics | CD8 Antigens - genetics | Survival Analysis | CD8-Positive T-Lymphocytes - immunology | Integrin alpha Chains - genetics | Lymphocytes, Tumor-Infiltrating - immunology | Melanoma - mortality | Ovarian Neoplasms - immunology | Head | Phenotypes | Tumor cells | CD8 antigen | T cell receptors | Lymphocytes T | Patients | Metastases | T-cell receptor | CD103 antigen | Major histocompatibility complex | Lymphocytes | Immunotherapy | Head and neck cancer | Solid tumors | Cancer | Tumors | Index Medicus | BASIC BIOLOGICAL SCIENCES
Journal Article
Journal Article
Journal of cancer research and clinical oncology, ISSN 0171-5216, 1/2018, Volume 144, Issue 1, pp. 53 - 61
Journal Article