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1. Integrate analysis of apricot germplasm originated from traditional and modern breeding programs
by Batnini, M.A and Krichen, L and Bourguiba, H and Trifi-Farah, N and Ruiz, D and Martinez-Gómez, P and Rubio, M
Acta Horticulturae, ISSN 0567-7572, 10/2017, Volume 1172, pp. 141 - 144
Molecular markers | Phenotype | SSRs
Conference Proceeding
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2. Full Text The Peach v2.0 release: High-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
by Verde, Ignazio and Jenkins, Jerry and Dondini, Luca and Micali, Sabrina and Pagliarani, Giulia and Vendramin, Elisa and Paris, Roberta and Aramini, Valeria and Gazza, Laura and Rossini, Laura and Bassi, Daniele and Troggio, Michela and Shu, Shengqiang and Grimwood, Jane and Tartarini, Stefano and Dettori, Maria Teresa and Schmutz, Jeremy and Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
BMC genomics, ISSN 1471-2164, 03/2017, Volume 18, Issue 1, pp. 225 - 225
Centromeric regions | Gap patching | SSRs | Recombination rates | SNPs | NGS resequencing | Prunus persica | WGS assembly | Linkage mapping | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Computational Biology - methods | Chromosome Mapping - methods | High-Throughput Nucleotide Sequencing | Polymorphism, Single Nucleotide | Prunus persica - genetics | Genomics - methods | Genotyping Techniques | Microsatellite Repeats | Genetic Linkage | Physiological aspects | Genetic aspects | Research | Nucleotide sequencing | Peach | DNA sequencing | Nucleotide sequence | Genomics | Domestication | Mapping | Genomes | Single-nucleotide polymorphism | Genetic diversity | Nucleotides | Shotguns | Phylogeny | Artificial chromosomes | Maps | Genetic analysis | Gene mapping | Species | Chromosomes | Assembly | Deoxyribonucleic acid--DNA | Speciation | Index Medicus | gap patching | Prunus persica, WGS assembly | BASIC BIOLOGICAL SCIENCES | linkage mapping | centromeric regions | recombination rates
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3. Morphological and genetic diversity among wild population of Lilium rubellum in Japan
by Yamamoto, S and Hiraki, N and Yamda, Y and Ouki, Y and Itokawa, K and Kuhara, T and Handa, T
Acta horticulturae, ISSN 0567-7572, 2019, Volume 1237, pp. 49 - 52
Microsatellite | Lily | SSR
Journal Article
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4. Full Text A reference genetic map of C. clementina hort. ex Tan.; citrus evolution inferences from comparative mapping
by Ollitrault, Patrick and Terol, Javier and Chen, Chunxian and Federici, Claire T and Lotfy, Samia and Hippolyte, Isabelle and Ollitrault, Frédérique and Bérard, Aurélie and Chauveau, Aurélie and Cuenca, Jose and Costantino, Gilles and Kacar, Yildiz and Mu, Lisa and Garcia-Lor, Andres and Froelicher, Yann and Aleza, Pablo and Boland, Anne and Billot, Claire and Navarro, Luis and Luro, François and Roose, Mikeal L and Gmitter, Frederick G and Talon, Manuel and Brunel, Dominique
BMC genomics, ISSN 1471-2164, 11/2012, Volume 13, Issue 1, pp. 593 - 593
Indels | Genetic maps | SSRs | SNPs | C. clementina | C. sinensis | C. maxima | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Synteny - genetics | Species Specificity | Genotype | Breeding - methods | Chromosome Mapping | Genetic Markers | Lod Score | Microsatellite Repeats - genetics | Haplotypes - genetics | Citrus - genetics | Hybridization, Genetic | Polymorphism, Single Nucleotide - genetics | Evolution, Molecular | Citrus | Citrus fruits | Chromosome mapping | Wildlife conservation | Genes | Genomics | Genomes | Single nucleotide polymorphisms | Databases | Research & development--R&D | Genetics | Software | Cultivars | Index Medicus | Gametes | Hybrids | Recombination | Nucleotide sequence | Gene pool | Data processing | Sex differences | Single-nucleotide polymorphism | Simple sequence repeats | Conserved sequence | Interspecific hybridization | Evolution | Gene mapping | Chromosomes | Life Sciences | Vegetal Biology | Environmental Sciences
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5. Analysis of grape rootstocks by microsatellite markers
by Jahnke, G and Májer, J and Szoke, B and Varga, P and Kocsisné Molnár, G and Tarczal, E and Kocsis, L
Acta Horticulturae, ISSN 0567-7572, 07/2014, Volume 1046, pp. 617 - 626
Vitis | SSR
Conference Proceeding
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6. Full Text Cocoa beans and liquor fingerprinting: A real case involving SSR profiling of CCN51 and “Nacional” varieties
by Stagnati, Lorenzo and Soffritti, Giovanna and Martino, Michelangelo and Bortolini, Cristian and Lanubile, Alessandra and Busconi, Matteo and Marocco, Adriano
Food control, ISSN 0956-7135, 12/2020, Volume 118, p. 107392
SSR | CCN51 | Food traceability | Cocoa | Ecuador Nacional
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7. Full Text Analysis of the genetic diversity and structure across a wide range of germplasm reveals prominent gene flow in apple at the European level
by Urrestarazu, Jorge and Denancé, Caroline and Ravon, Elisa and Guyader, Arnaud and Guisnel, Rémi and Feugey, Laurence and Poncet, Charles and Lateur, Marc and Houben, Patrick and Ordidge, Matthew and Fernandez-Fernandez, Felicidad and Evans, Kate M and Paprstein, Frantisek and Sedlak, Jiri and Nybom, Hilde and Garkava-Gustavsson, Larisa and Miranda, Carlos and Gassmann, Jennifer and Kellerhals, Markus and Suprun, Ivan and Pikunova, Anna V and Krasova, Nina G and Torutaeva, Elnura and Dondini, Luca and Tartarini, Stefano and Laurens, François and Durel, Charles-Eric
BMC plant biology, ISSN 1471-2229, 06/2016, Volume 16, Issue 1, pp. 130 - 130
Variability | Genetic resources | Parentage analysis | SSR markers | Population structure | Differentiation | Malus x domestica Borkh | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Genetic Variation | Malus - classification | Malus - embryology | Genome-Wide Association Study | Malus - metabolism | Gene Flow | Europe | Genotype | Genetic Markers | Phylogeny | Malus - genetics | Microsatellite Repeats | Apple | Plant breeding | Genetic variation | Genetic research | Genetic aspects | Research | Identification and classification | Index Medicus | Life Sciences
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8. Full Text Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
by Thiel, T and Michalek, W and Varshney, R and Graner, A
Theoretical and applied genetics, ISSN 0040-5752, 2/2003, Volume 106, Issue 3, pp. 411 - 422
Simple sequence repeats (SSRs) Polymorphism information content (PIC) Genetic mapping Diversity analysis | Genetic mapping | Diversity analysis | Polymorphism information content (PIC) | Simple sequence repeats (SSRs) | Life Sciences & Biomedicine | Horticulture | Agronomy | Agriculture | Genetics & Heredity | Plant Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Classical genetics, quantitative genetics, hybrids | Biological and medical sciences | Vegetals | Genetics of eukaryotes. Biological and molecular evolution | Pteridophyta, spermatophyta | Time Factors | Genes, Plant | Repetitive Sequences, Nucleic Acid | Polymorphism, Single Nucleotide | Genetic Markers | Genome, Plant | Hordeum - genetics | DNA, Plant - genetics | Microsatellite Repeats | Databases, Factual | Expressed Sequence Tags | Genetic Linkage | Index Medicus
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9. Full Text De novo transcriptomic analysis and development of EST-SSRs for Styrax japonicus
by Li, Wei and Zhang, Cuiping and Jiang, Xinqiang and Liu, Qingchao and Liu, Qinghua and Wang, Kuiling
Forests, ISSN 1999-4907, 11/2018, Volume 9, Issue 12, p. 748
Styrax japonicus | EST-SSRs | Genomics | Illumina sequencing | Transcriptome | Life Sciences & Biomedicine | Forestry | Science & Technology | genomics | transcriptome | EST–SSRs
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10. The genetic diversity of disjunct populations of Eastern hemlock (Tsuga canadensis) in Minnesota
by Ellingson, E and McNamara, S and Bradeen, J.M and Hokanson, S.C
Acta horticulturae, ISSN 0567-7572, 2018, Volume 1191, pp. 225 - 234
Inbreeding | Endangered species | Microsatellite markers | Conservation | SSRs
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11. Harmonising fingerprinting protocols to allow comparisons between germplasm collections - Pyrus
by Evans, K.M and Fernández-Fernández, F and Govan, C
Acta horticulturae, ISSN 0567-7572, 03/2009, Volume 814, pp. 103 - 106
Microsatellites | SSR
Journal Article
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12. Full Text Characteristics and analysis of simple sequence repeats in the cotton genome based on a linkage map constructed from a BC1 population between Gossypium hirsutum and G. barbadense
by Lin, Zhongxu and Xia, Qizhong and Zhang, Mingju and Zhang, Xianlong and Zhang, Yanxin
Genome, ISSN 0831-2796, 07/2008, Volume 51, Issue 7, pp. 534 - 546
genetic linkage map | EST-SSRs | motifs | SSR génomiques | cotonnier | cotton | carte génétique | EST-SSR | genomic SSRs | Motifs | Genomic SSRs | Cotton | Genetic linkage map | Gossypium - genetics | Chromosome Mapping | Genetic Markers | Genome, Plant | Microsatellite Repeats | Crosses, Genetic | Expressed Sequence Tags | Genetic Linkage | Polymorphism, Genetic | Index Medicus
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13. Full Text Molecular markers linked to bacterial wilt (Ralstonia solanacearum) resistance gene loci in eggplant (Solanum melongena L.)
by Pandiyaraj, P and Singh, T.H and Reddy, K. Madhavi and Sadashiva, A.T and Gopalakrishnan, C and Reddy, Anand C and Pattanaik, Arpita and Reddy, D.C. Lakshmana
Crop protection, ISSN 0261-2194, 10/2019, Volume 124, p. 104822
Resistance | Genetics | Bacterial wilt | Eggplant | SSR markers
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