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1. Full Text Evidence that glutamine transaminase and omega-amidase potentially act in tandem to close the methionine salvage cycle in bacteria and plants
by Ellens, Kenneth W and Richardson, Lynn G.L and Frelin, Océane and Collins, Joseph and Ribeiro, Cintia Leite and Hsieh, Yih-feng and Mullen, Robert T and Hanson, Andrew D
Phytochemistry, ISSN 0031-9422, 05/2015, Volume 113, pp. 160 - 169
The concerted actions of glutamine transaminase K and ω-amidase potentially close the methionine salvage cycle in plants and bacteria. The plant enzymes... 
ω-Amidase | Solanum lycopersicum cv. Floridade | Zea mays | Yang cycle | Comparative genomics | Poaceae | Maize | Methionine salvage pathway | Tomato | Nicotiana tabacum cv. Bright Yellow-2 Solanaceae | Tobacco | Solanaceae | Glutamine transaminase | Nicotiana tabacum cv. Bright Yellow-2 | PATHWAY | POLYAMINE BIOSYNTHESIS | ARABIDOPSIS | KETO-ACIDS | ASPARAGINE TRANSAMINATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | omega-Amidase | IDENTIFICATION | PLANT SCIENCES | S-ADENOSYLMETHIONINE | BACILLUS-SUBTILIS | AMINOTRANSFERASE | TUMOR-SUPPRESSOR NIT2 | Amidohydrolases - metabolism | Zea mays - chemistry | Lycopersicon esculentum - metabolism | Zea mays - genetics | Arabidopsis - chemistry | Arabidopsis - enzymology | Methionine - metabolism | Zea mays - enzymology | Lyases - metabolism | Arabidopsis - metabolism | Arabidopsis - genetics | Poaceae - metabolism | Transaminases - metabolism | Zea mays - metabolism | Ketoglutaric Acids - metabolism | Bacillus subtilis - metabolism | S-Adenosylmethionine - metabolism | Solanaceae - metabolism | Bacteria | Glutamine | Proteins | Arabidopsis thaliana | Sulfur compounds | Codon | Tomatoes
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2. Full Text Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway
by Moghe, Gaurav D and Leong, Bryan J and Hurney, Steven M and Jones, A. Daniel and Last, Robert L
eLife, ISSN 2050-084X, 08/2017, Volume 6
The diversity of life on Earth is a result of continual innovations in molecular networks influencing morphology and physiology. Plant specialized metabolism... 
Specialized metabolism | Plant defense | Trichome | Solanum lycopersicum | Enzyme evolution | Phylogenetic reconstruction | CONVERGENT EVOLUTION | MAXIMUM-LIKELIHOOD | SUCROSE ESTERS | SECONDARY METABOLISM | WHOLE-GENOME | REFERENCE GENOME | BIOLOGY | INFORMATION-THEORY | GLANDULAR TRICHOMES | RNA-SEQ DATA | SUGAR ESTERS | Solanaceae - enzymology | Solanaceae - classification | Transcriptome | Carbohydrate Metabolism - genetics | Substrate Specificity | Trichomes - enzymology | Phylogeny | Acyltransferases - metabolism | Acyltransferases - genetics | Gene Knockdown Techniques | Sugars - chemistry | Base Sequence | Mass Spectrometry | Sucrose - metabolism | Plant Proteins - metabolism | Acylation | RNA, Plant | Trichomes - metabolism | Gene Silencing | Biological Evolution | Plant Proteins - genetics | Carbohydrate Metabolism - physiology | Gene Amplification | Metabolic Networks and Pathways | Trichomes - genetics | Solanaceae - genetics | Sugars - metabolism | Evolution, Molecular | Solanaceae - metabolism | Defense industry | Analysis | Innovations | Physiological aspects | Genetic research | Research | Mass spectrometry | Plant metabolites | Enzymes | Sucrose | RNA-mediated interference | Mass spectroscopy | Biosynthesis | Metabolism | Ribonucleic acid--RNA | Studies | Proteins | Metabolites | Phylogenetics | Evolution | Gene duplication | Sugar | Novelty
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3. Full Text Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates
by Bienert, Gerd Patrick and Bienert, Manuela Désirée and Jahn, Thomas Paul and Boutry, Marc and Chaumont, François
The Plant Journal, ISSN 0960-7412, 04/2011, Volume 66, Issue 2, pp. 306 - 317
Major intrinsic proteins (MIPs) transport water and uncharged solutes across membranes in all kingdoms of life. Recently, an uncharacterized MIP subfamily was... 
solute | transport | alternative splicing | aquaporin | substrate selectivity | X intrinsic protein | SUBFAMILIES | DETERMINANTS | MAJOR INTRINSIC PROTEINS | BORON TRANSPORT | PLANT SCIENCES | HIGHLY DIVERGENT | PLANT AQUAPORINS | MULTIFUNCTIONAL WATER | HYDROGEN-PEROXIDE | CHANNELS | EXPRESSION | Xenopus | Plant Roots - metabolism | Flowers - metabolism | Cell Membrane Permeability | Aquaporins - metabolism | Flowers - chemistry | Phylogeny | Aquaporins - genetics | Oocytes | Saccharomyces cerevisiae - metabolism | Plant Proteins - genetics | Sequence Analysis, Protein | Animals | Glycerol - metabolism | Plant Roots - chemistry | Cloning, Molecular | Solanaceae - genetics | Urea - metabolism | Plant Proteins - metabolism | Solanaceae - metabolism | Glycerin | Urea | Boric acid | Potatoes | Aquaporins | Plant genetics | Glycerol | Cell membranes | Permeability | Amphibians | Proteins | Plant biology | Plasma | Membranes | Flowers & plants | Cellular biology | Alternative splicing
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4. Full Text Discovery, structure, function, and applications of cyclotides: Circular proteins from plants
by Weidmann, Joachim and Craik, David J
Journal of Experimental Botany, ISSN 0022-0957, 08/2016, Volume 67, Issue 16, pp. 4801 - 4812
We review cyclotides-cyclic proteins from plants-for their unique structures, functions, and pharmaceutical applications, with the aim of stimulating interest... 
insecticide | plant defence | Cyclic peptides | drug design | kalata B1 | cyclotides | OLDENLANDIA-AFFINIS | ANTHELMINTIC ACTIVITY | MOMORDICA-COCHINCHINENSIS | VIOLA-ODORATA | PLANT SCIENCES | CHASSALIA-PARVIFOLIA | CYCLIC-CYSTINE-KNOT | ANTI-HIV ACTIVITY | MACROCYCLIC POLYPEPTIDES | Cucurbitaceae - metabolism | Violaceae - metabolism | Magnoliopsida - genetics | Violaceae - genetics | Cyclotides - genetics | Magnoliopsida - metabolism | Plant Proteins - genetics | Fabaceae - metabolism | Cucurbitaceae - genetics | Cyclotides - metabolism | Solanaceae - genetics | Plant Proteins - metabolism | Fabaceae - genetics | Rubiaceae - genetics | Rubiaceae - metabolism | Solanaceae - metabolism
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5. Full Text Clustered Transcription Factor Genes Regulate Nicotine Biosynthesis in Tobacco
by Tsubasa Shoji and Masataka Kajikawa and Takashi Hashimoto
The Plant Cell, ISSN 1040-4651, 10/2010, Volume 22, Issue 10, pp. 3390 - 3409
Tobacco (Nicotiana tabacum) synthesizes nicotine and related pyridine alkaloids in the root, and their synthesis increases upon herbivory on the leaf via a... 
Alkaloids | Transcription factors | Genes | Genomics | Plant roots | Genetic loci | Biosynthesis | Genomes | Plants | Predetermined motion time systems | SECONDARY METABOLISM | SOLANACEAE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FUNCTIONAL GENOMICS | PLANT SCIENCES | CELL BIOLOGY | METHYL JASMONATE | N-METHYLTRANSFERASE GENES | TABACUM | PLANTS | ARABIDOPSIS | EXPRESSION | METHYLPUTRESCINE OXIDASE | Promoter Regions, Genetic | Multigene Family | Plant Roots - metabolism | Oligonucleotide Array Sequence Analysis | Plants, Genetically Modified - genetics | Tobacco - metabolism | Molecular Sequence Data | Plant Roots - genetics | RNA, Plant - genetics | Transcription Factors - genetics | Nicotine - biosynthesis | Transcription Factors - metabolism | Oxylipins - metabolism | Plant Proteins - genetics | Plants, Genetically Modified - metabolism | Tobacco - genetics | Gene Expression Regulation, Plant | Cyclopentanes - metabolism | Plant Proteins - metabolism | Physiological aspects | Research | Tobacco (Plant) | Nicotine
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6. Full Text Tobacco drought stress responses reveal new targets for Solanaceae crop improvement
by Rabara, Roel C and Tripathi, Prateek and Reese, R Neil and Rushton, Deena L and Alexander, Danny and Timko, Michael P and Shen, Qingxi J and Rushton, Paul J
BMC Genomics, ISSN 1471-2164, 06/2015, Volume 16, Issue 1, p. 484
Background: The Solanaceae are an economically important family of plants that include tobacco (Nicotiana tabacum L.), tomato, and potato. Drought is a major... 
TRANSCRIPTION FACTORS | SYSTEMS BIOLOGY PERSPECTIVE | TRANSGENIC TOBACCO | ARABIDOPSIS-THALIANA | ABIOTIC STRESS | GENE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | TOLERANCE | GENETICS & HEREDITY | PLANTS | ABSCISIC-ACID | EXPRESSION | Promoter Regions, Genetic | Plant Roots - metabolism | Plants, Genetically Modified - growth & development | Tobacco - metabolism | Stress, Physiological | Metabolome | Plant Roots - genetics | Tobacco - growth & development | Phylogeny | Transcription Factors - genetics | RNA, Messenger - metabolism | Transcription Factors - classification | Transcription Factors - metabolism | Plant Proteins - genetics | Plant Proteins - classification | Plants, Genetically Modified - metabolism | Plant Leaves - genetics | Plant Leaves - metabolism | Droughts | Tobacco - genetics | Plant Proteins - metabolism | Ketoglutaric Acids - metabolism | Plant Growth Regulators - metabolism | Principal Component Analysis | Botanical research | Hardiness | Plant breeding | Genetic research | Genetic aspects | Solanaceae | Research | Plants | Physiological aspects | Genetic transcription | DNA binding proteins
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7. Full Text Postharvest changes in LIN5-down-regulated plants suggest a role for sugar deficiency in cuticle metabolism during ripening
by Vallarino, José G and Yeats, Trevor H and Maximova, Eugenia and Rose, Jocelyn K and Fernie, Alisdair R and Osorio, Sonia
Phytochemistry, ISSN 0031-9422, 10/2017, Volume 142, pp. 11 - 20
The cell wall invertase gene ( ) was reported to be a key enzyme influencing sugar uptake of tomato ( ) fruit. It was additionally revealed to be a key... 
LIN5 gene | Fruit | Solanum lycopersicum | Invertase | Postharvest | Cuticle | Solanaceae | TOMATO FRUIT | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOMECHANICS | SOLANUM-LYCOPERSICON FRUIT | PLANT SCIENCES | CHALCONE SYNTHASE | CELL-WALL | CUTICULAR WAXES | EPIDERMAL-CELLS | TRANSPIRATION BARRIER PROPERTIES | GENE-EXPRESSION | CITRUS LEAF CUTICLES | Lycopersicon esculentum - metabolism | beta-Fructofuranosidase - metabolism | Down-Regulation | Lycopersicon esculentum - enzymology | Fruit - enzymology | Phenols - metabolism | Plant Epidermis - metabolism | Cell Wall - metabolism | Gene Expression Regulation, Plant | Membrane Lipids - metabolism | Lycopersicon esculentum - genetics | Carbohydrates - analysis | Plant Proteins - metabolism | Fruit - metabolism | Waxes - chemistry | Fruit - genetics | Physiological aspects | Enzymes | Carbohydrate metabolism | Plant physiology | Analysis
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8. Full Text Stress-induced expression of NICOTINE2-locus genes and their homologs encoding Ethylene Response Factor transcription factors in tobacco
by Shoji, Tsubasa and Hashimoto, Takashi
Phytochemistry, ISSN 0031-9422, 05/2015, Volume 113, pp. 41 - 49
Tobacco -locus s and their homologs have diverged in their responses to jasmonates and various environmental inputs, including salt stress, and may have... 
ERF transcription factors | Tobacco | Salt stress | Solanaceae | Nicotiana tabacum | Jasmonates | Nicotine | NICOTIANA-SYLVESTRIS | DNA-BINDING | SECONDARY METABOLISM | SUPERINDUCTION | PROTEIN-SYNTHESIS INHIBITORS | BIOCHEMISTRY & MOLECULAR BIOLOGY | INDUCTION | PLANT SCIENCES | SIGNAL-TRANSDUCTION | BIOSYNTHESIS | PUTRESCINE N-METHYLTRANSFERASE | JASMONATE | Plant Roots - metabolism | Sodium Chloride - pharmacology | Tobacco - metabolism | Acetates - metabolism | Transcription Factors - genetics | Ethylenes - metabolism | Nicotine - biosynthesis | Transcription Factors - metabolism | Oxylipins - metabolism | Tobacco - genetics | Nicotine - genetics | Tobacco - chemistry | Cyclopentanes - metabolism | Abscisic Acid - metabolism | Plant Proteins - metabolism | Genes | Ethylene | DNA binding proteins | Metabolites | Analysis | Abscisic acid | Genetic research | Protein biosynthesis | Genetic engineering
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9. Full Text Using the knowns to discover the unknowns: MS‐based dereplication uncovers structural diversity in 17‐hydroxygeranyllinalool diterpene glycoside production in the Solanaceae
by Heiling, Sven and Khanal, Santosh and Barsch, Aiko and Zurek, Gabriela and Baldwin, Ian T and Gaquerel, Emmanuel
The Plant Journal, ISSN 0960-7412, 02/2016, Volume 85, Issue 4, pp. 561 - 577
Exploring the diversity of plant secondary metabolism requires efficient methods to obtain sufficient structural insights to discriminate previously known from... 
Nicotiana attenuata | in‐source collision‐induced dissociation | malonylation | high‐resolution time‐of‐flight mass spectrometry | technical advance | 17‐hydroxygeranyllinallool diterpene glycosides | Capsicum annuum | dereplication | Nicotiana cavicola | Nicotiana obtusifolia | 17-hydroxygeranyllinallool diterpene glycosides | high-resolution time-of-flight mass spectrometry | in-source collision-induced dissociation | DETOXIFICATION | COLLISION-INDUCED DISSOCIATION | IDENTIFICATION | FRAGMENTATION | PLANT SCIENCES | NICOTIANA-ATTENUATA | BIOSYNTHESIS | GLUCOSIDES | SPECTRA | TOMATO | Plant Leaves - chemistry | Signal Transduction | Solanaceae - chemistry | Species Specificity | Tobacco - metabolism | Diterpenes - isolation & purification | Glycosides - classification | Metabolomics - methods | Diterpenes - classification | Oxylipins - metabolism | Capsicum - metabolism | Plant Leaves - metabolism | Glycosides - isolation & purification | Tobacco - chemistry | Cyclopentanes - metabolism | Lycium - metabolism | Plant Growth Regulators - metabolism | Glycosides - chemistry | Tandem Mass Spectrometry - methods | Lycium - chemistry | Capsicum - chemistry | Diterpenes - chemistry | Solanaceae - metabolism | Mass spectrometry | Analysis | Plant metabolites | Metabolites | Metabolism | Life Sciences | Vegetal Biology
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10. Full Text Short-chain dehydrogenase/reductase governs steroidal specialized metabolites structural diversity and toxicity in the genus Solanum
by Sonawane, Prashant D and Heinig, Uwe and Panda, Sayantan and Gilboa, Netta Segal and Yona, Meital and Pradeep Kumar, S and Alkan, Noam and Unger, Tamar and Bocobza, Samuel and Pliner, Margarita and Malitsky, Sergey and Tkachev, Maria and Meir, Sagit and Rogachev, Ilana and Aharoni, Asaph
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 06/2018, Volume 115, Issue 23, pp. E5419 - E5428
Thousands of specialized, steroidal metabolites are found in a wide spectrum of plants. These include the steroidal glycoalkaloids (SGAs), produced primarily... 
Structural diversity | Specialized metabolism | Antinutritional | Tomato | Steroidal glycoalkaloids | PLANT | antinutritional | structural diversity | MULTIDISCIPLINARY SCIENCES | specialized metabolism | PROGESTERONE 5-BETA-REDUCTASE | tomato | steroidal glycoalkaloids | POTATO GLYCOALKALOIDS | CLONING | BIOSYNTHESIS | ISOMERASE | CHEMISTRY | HETEROLOGOUS EXPRESSION | DIGITALIS-LANATA | Lycopersicon esculentum - metabolism | Plant Extracts - chemistry | Oxidoreductases - metabolism | Solanaceae - chemistry | Gene Expression Regulation, Plant - genetics | Glycosides - biosynthesis | Lycopersicon esculentum - enzymology | Tomatine - metabolism | Tomatine - analogs & derivatives | Saponins - chemistry | Plants, Genetically Modified - metabolism | Lycopersicon esculentum - genetics | Saponins - metabolism | Alkaloids - biosynthesis | Glycosides - chemistry | Alkaloids - chemistry | Saponins - biosynthesis | Solanaceae - metabolism | Steroids - chemistry | Physiological aspects | Oxidoreductases | Solanum | Steroid hormones | Enzymes | Saponins | Toxicity | Aglycones | Chemical reactions | Chains | Glycoalkaloids | Plant protection | Tomatidine | Metabolism | Dehydrogenase | Substrates | Metabolites | Glycosides | Tomatine | Tomatoes | Recombinant | Reductase | Biological Sciences | PNAS Plus
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11. Full Text Botanical and biological pesticides elicit a similar Induced Systemic Response in tomato (Solanum lycopersicum) secondary metabolism
by Pretali, Luca and Bernardo, Letizia and Butterfield, Timothy S and Trevisan, Marco and Lucini, Luigi
Phytochemistry, ISSN 0031-9422, 10/2016, Volume 130, pp. 56 - 63
Natural pesticides have attracted substantial interest due to the increase in organic agriculture and enhanced attention to environmental pollution. Plant... 
Metabolomics | Induced Systemic Response | Solanaceae | Azadirachtin | Bacillus subtilis | Solanum lycopersicum | HISTIDINE BIOSYNTHESIS | FRUIT EXTRACT | BIOCHEMISTRY & MOLECULAR BIOLOGY | PLANT SCIENCES | SYNTHASE | AMINO-ACID | GLUCOSINOLATE BIOSYNTHESIS | RESISTANCE | AZADIRACHTA-INDICA | PLANTS | ARABIDOPSIS | SIGNALING NETWORKS | Lycopersicon esculentum - metabolism | Sesquiterpenes - metabolism | Azadirachta - drug effects | Plant Diseases - microbiology | Cyclopentanes - pharmacology | Secondary Metabolism | Limonins - pharmacology | Plant Leaves - metabolism | Indoleacetic Acids - pharmacology | Flavonoids - metabolism | Oxylipins - pharmacology | Plant Proteins - metabolism | Bacillus subtilis - drug effects | Biological Control Agents - pharmacology | Flavonoids | Auxin | Sterols | Flavones | Bioflavonoids | Pesticides | Physiological aspects | Plants | Organic farming | Tomatoes | Plant metabolites
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12. Full Text Tobacco NUP1 transports both tobacco alkaloids and vitamin B6
by Kato, Keita and Shitan, Nobukazu and Shoji, Tsubasa and Hashimoto, Takashi
Phytochemistry, ISSN 0031-9422, 05/2015, Volume 113, pp. 33 - 40
The tobacco purine permease-family transporter, nicotine uptake permease 1 (NtNUP1), is shown here to import not only tobacco alkaloids but also vitamin B6,... 
PUP-family transporters | Tobacco | Transport assays | Solanaceae | Nicotiana tabacum | Transporter | Vitamin B6 | Nicotine | CELLS | ANATABINE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FAMILY | PLANT SCIENCES | ENZYME | NICOTINE BIOSYNTHESIS | MULTIDRUG | TABACUM | ARABIDOPSIS | Nucleobase Transport Proteins - metabolism | Plant Roots - metabolism | Pyridines - metabolism | Vitamin B 6 - metabolism | Saccharomyces cerevisiae - genetics | Tobacco - metabolism | Tobacco - chemistry | Alkaloids - metabolism | Plant Proteins - metabolism | Pyridoxine - metabolism | Pyridoxamine - metabolism | Alkaloids | Vitamins | Arabidopsis thaliana | Cytokinins | Pyridine | Metabolites | Caffeine
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