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1. Full Text Zea mays irs1563: A comprehensive genome-scale metabolic reconstruction of maize metabolism
by Saha, Rajib and Suthers, Patrick F and Maranas, Costas D
PLoS ONE, ISSN 1932-6203, 2011, Volume 6, Issue 7, p. e21784
The scope and breadth of genome-scale metabolic reconstructions have continued to expand over the last decade. Herein, we introduce a genome-scale model for a... 
PLANT | DRAFT SEQUENCE | DATABASE | BIOFUEL PRODUCTION | BIOSYNTHESIS | MULTIDISCIPLINARY SCIENCES | ESCHERICHIA-COLI | BROWN-MIDRIB MUTANTS | ARABIDOPSIS | PHOTOSYNTHESIS | SYSTEMS BIOLOGY | Cell Wall - radiation effects | Galactose - metabolism | Species Specificity | Carbon Cycle - radiation effects | Organelles - drug effects | Biomass | Cell Compartmentation - radiation effects | Arabidopsis - radiation effects | Cell Wall - drug effects | Light | Carbon Cycle - drug effects | Acetaldehyde - pharmacology | Zea mays - metabolism | Zea mays - genetics | Arabidopsis - drug effects | Genome, Plant - genetics | Molecular Sequence Annotation | Organelles - radiation effects | Zea mays - drug effects | Zea mays - radiation effects | Mutation - genetics | Arabidopsis - genetics | Metabolic Networks and Pathways - genetics | Genes, Plant - genetics | Cell Wall - metabolism | Cell Compartmentation - drug effects | Glucose - metabolism | Models, Genetic | Metabolic Networks and Pathways - drug effects | Metabolic Networks and Pathways - radiation effects | Organelles - metabolism | Acetaldehyde - analogs & derivatives | Arabidopsis thaliana | Metabolites | Biomass energy | Isoenzymes | Phytochemistry | Genomics | Genomes | Photosynthesis | Biotechnology | Lignin | Food plants | Seeds | Chemical engineering | Genes | Homology | Maize | Proteins | Annotations | Lignocellulose | E coli | Photorespiration | Compartments | Agricultural production | Physiology | Mathematical models | Flowers & plants | Corn | Sorghum | Principal components analysis | Food production | Metabolism | Biofuels | Mutants | Biodiesel fuels | Genetic engineering | Cytoplasm
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2. Full Text Low pH, Aluminum, and Phosphorus Coordinately Regulate Malate Exudation through GmALMT1 to Improve Soybean Adaptation to Acid Soils
by Cuiyue Liang and Miguel A. Piñeros and Jiang Tian and Zhufang Yao and Lili Sun and Jiping Liu and Jon Shaff and Alison Coluccio and Leon V. Kochian and Hong Liao
Plant Physiology, ISSN 0032-0889, 3/2013, Volume 161, Issue 3, pp. 1347 - 1361
Low pH, aluminum (Al) toxicity, and low phosphorus (P) often coexist and are heterogeneously distributed in acid soils. To date, the underlying mechanisms of... 
Soybeans | Aluminum | Root growth | Plant roots | Exudation | Plants | Acid soils | Root tips | MEMBRANES, TRANSPORT, AND BIOENERGETICS | Genotypes | TRITICUM-AESTIVUM L | MULTIPLE GENES | PROTON RELEASE | SORGHUM PLANTS | ROOT-GROWTH | XENOPUS-OOCYTES | MALIC-ACID | ORGANIC-ACIDS | NUTRIENT-UPTAKE | 2 CULTIVARS | PLANT SCIENCES | Arabidopsis - physiology | Soybeans - drug effects | Meristem - physiology | Adaptation, Physiological - drug effects | Biomass | Soybeans - genetics | Organic Anion Transporters - metabolism | Organic Anion Transporters - genetics | Adaptation, Physiological - genetics | Hydrogen-Ion Concentration - drug effects | Plants, Genetically Modified | Malates - metabolism | Oocytes - drug effects | Cell Membrane - metabolism | Plant Proteins - metabolism | Meristem - drug effects | Cell Membrane - drug effects | Arabidopsis - drug effects | Oocytes - metabolism | Xenopus laevis | Genotype | Aluminum - toxicity | Meristem - growth & development | Acids - toxicity | Arabidopsis - genetics | Phosphorus - pharmacology | Plant Proteins - genetics | Gene Expression Regulation, Plant - drug effects | Animals | Genes, Plant - genetics | Soil - chemistry | Soybeans - physiology | Carrier proteins | Soil acidity | Physiological aspects | Environmental aspects | Malic acid | Soybean | Growth (Plants) | Index Medicus
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3. Full Text Selenium protects sorghum leaves from oxidative damage under high temperature stress by enhancing antioxidant defense system
by Djanaguiraman, M and Prasad, P.V.V and Seppanen, M
Plant Physiology and Biochemistry, ISSN 0981-9428, 2010, Volume 48, Issue 12, pp. 999 - 1007
Oxidative stress is commonly induced when plants are grown under high temperature (HT) stress conditions. Selenium often acts as an antioxidant in plants;... 
Reactive oxygen species | Selenium | Antioxidant enzyme | Oxidative damage | High temperature stress | Grain sorghum | LIPID-PEROXIDATION | TOLERANCE | VIABILITY | DROUGHT | PLANT SCIENCES | LEAF SENESCENCE | GRAIN-SORGHUM | HYDROGEN-PEROXIDE | SUPEROXIDE-DISMUTASE | CARBON-DIOXIDE | PHOTOSYNTHESIS | Stress, Physiological - physiology | Sorghum - drug effects | Reactive Oxygen Species - metabolism | Edible Grain - drug effects | Selenium - pharmacology | Antioxidants - metabolism | Adaptation, Physiological - drug effects | Sorghum - physiology | Chlorophyll - metabolism | Hot Temperature | Cell Membrane - physiology | Edible Grain - physiology | Selenic Acid | Edible Grain - growth & development | Photosynthesis - drug effects | Photosynthesis - physiology | Selenium Compounds - pharmacology | Oxidants - biosynthesis | Plant Leaves - drug effects | Stress, Physiological - drug effects | Oxidative Stress - drug effects | Sorghum - growth & development | Plant Leaves - physiology | Antioxidants | Enzymes | Chlorophyll | Crop yields | Defense industry | Phytochemistry | Physiological aspects | Superoxide | Photosynthesis
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4. Full Text Silicon‐mediated changes in polyamines participate in silicon‐induced salt tolerance in Sorghum bicolor L
by Yin, Lina and Wang, Shiwen and Tanaka, Kiyoshi and Fujihara, Shinsuke and Itai, Akihiro and Den, Xiping and Zhang, Suiqi
Plant, Cell & Environment, ISSN 0140-7791, 02/2016, Volume 39, Issue 2, pp. 245 - 258
Silicon (Si) is generally considered a beneficial element for the growth of higher plants, especially under stress conditions, but the mechanisms remain... 
spermidine | salt stress | arginine | ethylene | ion concentration | 1‐aminocyclopropane‐1‐carboxylic acid (ACC) | Ion concentration | Salt stress | Arginine | Spermidine | 1-aminocyclopropane-1-carboxylic acid (ACC) | Ethylene | ARABIDOPSIS-THALIANA | HORDEUM-VULGARE L | PLANT SCIENCES | PROGRAMMED CELL-DEATH | PERFORMANCE LIQUID-CHROMATOGRAPHY | ORYZA-SATIVA L | HYDROXYL RADICALS | REDUCES SODIUM UPTAKE | SALINITY TOLERANCE | STRESS TOLERANCE | INDUCED K+ EFFLUX | Glycine - analogs & derivatives | Sorghum - physiology | Gene Expression Profiling | Plant Development - drug effects | Biomass | Plant Development - genetics | Plant Roots - drug effects | Salt-Tolerance - drug effects | Silicon - pharmacology | Biosynthetic Pathways - genetics | Salt-Tolerance - genetics | Plant Leaves - drug effects | Sorghum - genetics | Sorghum - growth & development | Real-Time Polymerase Chain Reaction | Sorghum - drug effects | Plant Roots - metabolism | Methionine - metabolism | Ions | Chlorophyll - metabolism | Polyamines - metabolism | Gene Expression Regulation, Plant - drug effects | Biosynthetic Pathways - drug effects | Glycine - pharmacology | Plant Leaves - metabolism | Amino Acids, Cyclic - metabolism | Spermidine - pharmacology | Benzylamines - pharmacology | Arginine - metabolism | Physiological aspects | Silicon | Erythromycin | Polyamines
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5. Full Text Erythromycin oxidation and ERY-resistant Escherichia coli inactivation in urban wastewater by sulfate radical-based oxidation process under UV-C irradiation
by Michael-Kordatou, I and Iacovou, M and Frontistis, Z and Hapeshi, E and Dionysiou, D.D and Fatta-Kassinos, D
Water Research, ISSN 0043-1354, 11/2015, Volume 85, pp. 346 - 358
This study evaluates the feasibility of UV-C-driven advanced oxidation process induced by sulfate radicals (SO4−) in degrading erythromycin (ERY) in secondary... 
Transformation products | Phytotoxicity | Erythromycin | Antibiotic-resistant bacteria | Sulfate radicals | ANTIBIOTIC-RESISTANCE | WATER RESOURCES | HETEROTROPHIC BACTERIA | ACUTE TOXICITY | MASS-SPECTROMETRY | ACTIVATED PERSULFATE OXIDATION | AQUEOUS-SOLUTION | HYDROXYL RADICALS | ENVIRONMENTAL SCIENCES | REMOVAL | ENGINEERING, ENVIRONMENTAL | TREATMENT PLANTS | DEGRADATION | Biodegradation, Environmental | Lepidium sativum - drug effects | Sorghum - drug effects | Sodium Compounds - chemistry | Oxidation-Reduction | Escherichia coli - drug effects | Waste Water - analysis | Drug Resistance, Bacterial | Sinapis - drug effects | Ultraviolet Rays | Waste Disposal, Fluid - methods | Photolysis | Sulfates - chemistry | Water Pollutants, Chemical - radiation effects | Waste Water - toxicity | Anti-Bacterial Agents - radiation effects | Erythromycin - radiation effects | Escherichia coli - physiology | Sewage | Purification | Escherichia coli | Green technology | Oxidation-reduction reaction | Wastewater | Sulfates | Humic acid | Drug resistance in microorganisms | Drinking water, Bottled | Bacteria | Degradation | Effluents | Oxidation | Inactivation | Waste water
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6. Full Text Carbon/nitrogen imbalance associated with drought-induced leaf senescence in sorghum bicolor
by Chen, Daoqian and Wang, Shiwen and Xiong, Binglin and Cao, Beibei and Deng, Xiping
PLoS ONE, ISSN 1932-6203, 08/2015, Volume 10, Issue 8, p. e0137026
Drought stress triggers mature leaf senescence, which supports plant survival and remobilization of nutrients; yet leaf senescence also critically decreases... 
CARBON | MESSENGER-RNA | WATER-STRESS | MULTIDISCIPLINARY SCIENCES | GLUTAMINE-SYNTHETASE | GENE-EXPRESSION | PLANTS | NITRATE REDUCTASE-ACTIVITY | NITROGEN AVAILABILITY | ARABIDOPSIS | ABSCISIC-ACID | Carbon - metabolism | Nitrogen - metabolism | Sorghum - drug effects | Sorghum - physiology | Sorghum - metabolism | Chlorophyll - metabolism | Photosystem II Protein Complex - metabolism | Dose-Response Relationship, Drug | Gene Expression Regulation, Plant - drug effects | Plant Leaves - metabolism | Droughts | Photosynthesis - drug effects | Plant Leaves - growth & development | Nitrogen - pharmacology | Osmotic Pressure - drug effects | Plant Leaves - drug effects | Stress, Physiological - drug effects | Sorghum - growth & development | Carbon - pharmacology | Botanical research | Hardiness | Fixation | Aging | Physiological aspects | Research | Plants | Carbon fixation | Nitrogen | Observations | Growth conditions | Chlorophyll | Carbohydrates | Senescence | Soil erosion | Sorghum | Photosystem II | Gene expression | Carbon | Seedlings | Soil treatment | Leaves | Photosystem | Nitrogen balance | Plant growth | Metabolites | Nutrients | Drought | Photosynthesis | Crop yield | Sugar | Photochemistry
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7. Full Text Elevated CO2 increases photosynthesis, biomass and productivity, and modifies gene expression in sugarcane
by DE SOUZA, AMANDA PEREIRA and GASPAR, MARILIA and DA SILVA, EMERSON ALVES and ULIAN, EUGÊNIO CÉSAR and WACLAWOVSKY, ALESSANDRO JAQUIEL and NISHIYAMA JR, MILTON YUTAKA and DOS SANTOS, RENATO VICENTINI and TEIXEIRA, MARCELO MENOSSI and SOUZA, GLAUCIA MENDES and BUCKERIDGE, MARCOS SILVEIRA
Plant, Cell & Environment, ISSN 0140-7791, 08/2008, Volume 31, Issue 8, pp. 1116 - 1127
ABSTRACT Because of the economical relevance of sugarcane and its high potential as a source of biofuel, it is important to understand how this crop will... 
CO2 enrichment | C4 photosynthesis | sucrose | cDNA microarrays | energy | enrichment | Energy | Sucrose | photosynthesis | ARABIDOPSIS-THALIANA | SORGHUM LEAVES | C-4 photosynthesis | C-4 PLANTS | ENRICHMENT POPFACE | PLANT SCIENCES | SIGNAL-TRANSDUCTION | ATMOSPHERIC CO2 | CELL EXPANSION | GROWTH | CARBON-DIOXIDE | MICROARRAY DATA | Photosynthesis - radiation effects | Saccharum - radiation effects | Temperature | Gases - metabolism | Plant Leaves - radiation effects | Biomass | Reverse Transcriptase Polymerase Chain Reaction | Saccharum - genetics | Saccharum - growth & development | Saccharum - drug effects | Gene Expression Regulation, Plant - drug effects | Lignin - metabolism | Plant Leaves - genetics | Plant Stomata - radiation effects | Photosynthesis - drug effects | Plant Leaves - growth & development | Light | Humidity | Sucrose - metabolism | Plant Stomata - drug effects | Plant Leaves - drug effects | Carbon Dioxide - pharmacology | Cellulose - metabolism
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8. Full Text Photosynthetic leaf area modulates tiller bud outgrowth in sorghum
by KEBROM, TESFAMICHAEL H and MULLET, JOHN E
Plant, Cell & Environment, ISSN 0140-7791, 08/2015, Volume 38, Issue 8, pp. 1471 - 1478
Shoot branches or tillers develop from axillary buds. The dormancy versus outgrowth fates of buds depends on genetic, environmental and hormonal signals.... 
shoot branching | dormancy | apical dominance | axillary bud | sucrose | tillering | defoliation | Dormancy | Tillering | Defoliation | Sucrose | Apical dominance | Axillary bud | Shoot branching | CYTOKININ | WHEAT | PLANT SCIENCES | AUXIN | INHIBITION | GENE | GROWTH SUBSTANCE | ARABIDOPSIS | EXPRESSION | Cell Cycle - genetics | Sorghum - drug effects | Genes, Plant | Sorghum - physiology | Seedlings - genetics | Sucrose - pharmacology | Seedlings - drug effects | Plant Proteins - genetics | Gene Expression Regulation, Plant - drug effects | Photosynthesis - genetics | Photosynthesis - drug effects | Plant Leaves - growth & development | Plant Dormancy - genetics | Plant Leaves - anatomy & histology | Plant Leaves - drug effects | Plant Proteins - metabolism | Sorghum - genetics | Cell Cycle - drug effects | Real-Time Polymerase Chain Reaction | Photosynthesis | Erythromycin
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9. Full Text Involvement of phospholipase D and phosphatidic acid in the light-dependent up-regulation of sorghum leaf phosphoenolpyruvate carboxylase-kinase
by José Antonio Monreal and Francisco Javier López-Baena and Jean Vidal and Cristina Echevarría and Sofía García-Mauriño
Journal of Experimental Botany, ISSN 0022-0957, 1/2010, Volume 61, Issue 10, pp. 2819 - 2827
The photosynthetic phosphoenolpyruvate carboxylase (C 4 -PEPC) is regulated by phosphorylation by a phosphoenolpyruvate carboxylase kinase (PEPC-k). In... 
Leaves | Up regulation | Enzymes | Phosphorylation | Calcium | Protoplasts | Sorghum | Phosphatidic acids | Phospholipids | Gene expression | RESEARCH PAPER | Sorghum bicolor | Phosphoenolpyruvate carboxylase kinase | dependent protein kinase | Phosphoenolpyruvate carboxylase | Phospholipase D | Phosphatidic acid | Phospholipase C | phospholipase C | phospholipase D | ACTIVATION | PHOSPHORYLATION | Ca2+-dependent protein kinase | phosphoenolpyruvate carboxylase kinase | LEAVES | PROTOPLASTS | PROTEIN-SERINE KINASE | PLANT SCIENCES | PATHWAY | phosphoenolpyruvate carboxylase | GENE FAMILY | phosphatidic acid | EXPRESSION | Protein Kinases - metabolism | Sorghum - enzymology | Gene Expression Regulation, Enzymologic - drug effects | Electron Transport - drug effects | Electron Transport - radiation effects | Up-Regulation - radiation effects | Type C Phospholipases - metabolism | Light Signal Transduction - radiation effects | Type C Phospholipases - antagonists & inhibitors | Light Signal Transduction - drug effects | Light | Phosphoinositide Phospholipase C - metabolism | Sorghum - genetics | 1-Butanol - pharmacology | Plant Leaves - enzymology | Protein-Serine-Threonine Kinases - metabolism | Photosynthesis - radiation effects | Gene Expression Regulation, Plant - radiation effects | Sorghum - drug effects | Gene Expression Regulation, Enzymologic - radiation effects | Enzyme Inhibitors - pharmacology | Protein-Serine-Threonine Kinases - genetics | Plant Leaves - radiation effects | Sorghum - radiation effects | Enzyme Activation - drug effects | Phospholipase D - metabolism | Up-Regulation - drug effects | Gene Expression Regulation, Plant - drug effects | Plant Leaves - genetics | Photosynthesis - drug effects | Phosphoenolpyruvate Carboxylase - metabolism | Phosphatidic Acids - metabolism | Research Papers
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10. Full Text Diverse effects of arsenic on selected enzyme activities in soil–plant–microbe interactions
by Lyubun, Yelena V and Pleshakova, Ekaterina V and Mkandawire, Martin and Turkovskaya, Olga V
Journal of Hazardous Materials, ISSN 0304-3894, 11/2013, Volume 262, pp. 685 - 690
•Arsenic was a disadvantage for plant growth and soil enzyme activity.•The growth of the plants promoted soil dehydrogenase activity.•Ryegrass and rape... 
Peroxidase | Arsenic | Dehydrogenase | Phosphatase | Phytoremediation | BACTERIA | HEAVY-METALS | CONTAMINATION | TOXICITY | MICROORGANISMS | ENVIRONMENTAL SCIENCES | REMOVAL | VERMICOMPOST | ENGINEERING, ENVIRONMENTAL | AVAILABILITY | INDICATORS | Arsenic - toxicity | Poaceae - drug effects | Arsenic - metabolism | Soil Pollutants - toxicity | Poaceae - metabolism | Peroxidases - metabolism | Plant Leaves - drug effects | Sorghum - growth & development | Plant Stems - growth & development | Biodegradation, Environmental | Germination - drug effects | Brassica rapa - metabolism | Sorghum - drug effects | Oxidoreductases - metabolism | Soil Microbiology | Brassica rapa - drug effects | Helianthus - metabolism | Sorghum - metabolism | Brassica rapa - growth & development | Soil Pollutants - metabolism | Helianthus - drug effects | Plant Stems - drug effects | Plant Leaves - growth & development | Phosphoric Monoester Hydrolases - metabolism | Poaceae - growth & development | Helianthus - growth & development | Physiological aspects | Enzymes | Plants | Plant physiology | Soil microbiology
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11. Full Text Assessment of the effects of soil PAH accumulation by a battery of ecotoxicological tests
by Manzo, Sonia and De Nicola, Flavia and De Luca Picione, Fabiano and Maisto, Giulia and Alfani, Anna
Chemosphere, ISSN 0045-6535, 05/2008, Volume 71, Issue 10, pp. 1937 - 1944
Surface soils were collected at remote, urban and industrial sites in the Southern of Italy in order to evaluate PAH concentrations and assess the toxic... 
Ecotoxicological test battery | Toxicity index | Ecotoxicological risk | Soil PAH contamination | PLANT | toxicity index | TOXICITY ASSESSMENT | soil PAH contamination | POLYCYCLIC AROMATIC-HYDROCARBONS | BIOASSAYS | ENVIRONMENTAL SCIENCES | ecotoxicological test battery | HEAVY-METAL | CHEMICALS | CONTAMINATED SOILS | URBAN AREA | ECOLOGICAL RISK | SAMPLES | ecotoxicological risk | Germination - drug effects | Lepidium sativum - drug effects | Lepidium sativum - growth & development | Sorghum - drug effects | Crustacea - growth & development | Daphnia - physiology | Polycyclic Aromatic Hydrocarbons - toxicity | Luminescence | Motor Activity - drug effects | Sinapis - drug effects | Chlorophyta - growth & development | Soil Pollutants - analysis | Soil Pollutants - toxicity | Crustacea - drug effects | Daphnia - drug effects | Animals | Aliivibrio fischeri - drug effects | Aliivibrio fischeri - metabolism | Polycyclic Aromatic Hydrocarbons - analysis | Sinapis - growth & development | Italy | Chlorophyta - drug effects | Sorghum - growth & development | Index Medicus
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12. Full Text Effects of Saline-Alkaline Stress on Seed Germination and Seedling Growth of Sorghum bicolor (L.) Moench
by Zhao, Yanyun and Lu, Zhaohua and He, Lei
Applied Biochemistry and Biotechnology, ISSN 0273-2289, 8/2014, Volume 173, Issue 7, pp. 1680 - 1691
In order to study the adaptation ability of sweet sorghum (Sorghum bicolor L. Moench) in the Yellow River Delta, the sweet sorghum variety Mart was used in... 
Biochemistry, general | Biotechnology | Chemistry | Sweet sorghum ( Sorghum bicolor (L.) Moench) | Mixed saline-alkaline stress | Seedling growth | Activity of protective enzyme | Seed germination | Sweet sorghum (Sorghum bicolor (L.) Moench) | OSMOTIC ADJUSTMENT | Sweet sorghum (Sorghumbicolor (L.) Moench) | TOLERANCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ION | CHARACTERS | SALT STRESS | CULTIVARS | PLANTING SWEET SORGHUM | TEMPERATURE | YELLOW-RIVER DELTA | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | WATER-USE EFFICIENCY | Germination - drug effects | Sorghum - drug effects | Seeds - drug effects | Solubility | Sorghum - physiology | Sorghum - metabolism | Biomass | Chlorophyll - metabolism | Seedlings - drug effects | Seedlings - growth & development | Salinity | Dose-Response Relationship, Drug | Salts - pharmacology | Seedlings - physiology | Seeds - growth & development | Seeds - physiology | Photosynthesis - drug effects | Plant Proteins - chemistry | Plant Proteins - metabolism | Stress, Physiological - drug effects | Sorghum - growth & development | Hydrogen-Ion Concentration | Seedlings - metabolism | Antioxidants | Chlorophyll | Enzymes | Seeds | Growth | Analysis | Germination | Revegetation | Superoxide | Saline water | Plant growth | Wheat
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