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Methods in Molecular Biology, ISSN 1064-3745, 2017, Volume 1552, pp. 43 - 61
Transmembrane beta-barrels (TMBBs) constitute an important structural class of membrane proteins located in the outer membrane of gram-negative bacteria, and... 
Algorithms | Beta barrel | Transmembrane | Prediction | Hidden Markov model | Membrane | Protein | Computational Biology - methods | Markov Chains | Membrane Proteins - chemistry | Computer Simulation | Databases, Protein | Humans | Models, Molecular | Protein Conformation
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 4/2014, Volume 111, Issue 16, pp. 5878 - 5883
Journal Article
Journal Article
Journal Article
Expert Systems With Applications, ISSN 0957-4174, 11/2016, Volume 61, pp. 203 - 214
Journal Article
Journal Article
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, ISSN 0027-8424, 02/2018, Volume 115, Issue 7, pp. 1511 - 1516
beta-Barrel membrane proteins (beta MPs) play important roles, but knowledge of their structures is limited. We have developed a method to predict their 3D... 
TOPOLOGY | OUTER-MEMBRANE | WEAKLY STABLE REGIONS | MULTIDISCIPLINARY SCIENCES | strand register | MONTE-CARLO METHOD | NANOPORE | beta-barrel membrane proteins | structure prediction | ALPHA-HEMOLYSIN | OLIGOMERIZATION STATE | Covariation | PORE | TRANSMEMBRANE DOMAINS | loop prediction | LOOPS | β-barrel membrane proteins | Biological Sciences
Journal Article
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2018, Volume 8, Issue 1, pp. 4446 - 14
Modeling membrane protein (MP) folding, insertion, association and their interactions with other proteins, lipids, and drugs requires accurate transfer free... 
DERIVATION | OUTER-MEMBRANE | INSERTION | HYDROPHOBICITY SCALE | RECOGNITION | MULTIDISCIPLINARY SCIENCES | TRANSMEMBRANE | SECONDARY STRUCTURE | TOPOLOGY PREDICTION | SIMULATION | WEB SERVER | Proteins | Lipid composition | Protein composition | Asymmetry | Protein folding | Outer membranes | Amino acids | Organelles | Membrane proteins
Journal Article
Current Pharmaceutical Design, ISSN 1381-6128, 2014, Volume 20, Issue 8, pp. 1268 - 1273
Journal Article
Biological Chemistry, ISSN 1431-6730, 11/2012, Volume 393, Issue 11, pp. 1341 - 1355
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2004, Volume 32, Issue Web Server issue, pp. W400 - W404
The beta-barrel outer membrane proteins constitute one of the two known structural classes of membrane proteins. Whereas there are several different web-based... 
TRANSMEMBRANE REGIONS | DATABASE | SEGMENTS | BIOCHEMISTRY & MOLECULAR BIOLOGY | NEURAL-NETWORK | CLASSIFICATION | IDENTIFICATION | Computer Graphics | Sequence Analysis, Protein | User-Computer Interface | Markov Chains | Gram-Negative Bacteria - chemistry | Protein Structure, Secondary | Bacterial Outer Membrane Proteins - chemistry | Software | Internet
Journal Article
Annual Review of Analytical Chemistry, ISSN 1936-1327, 6/2018, Volume 11, Issue 1, pp. 375 - 395
Journal Article