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Journal of molecular biology, ISSN 0022-2836, 2008, Volume 380, Issue 2, pp. 425 - 436
Journal Article
Nature structural & molecular biology, ISSN 1545-9985, 2007, Volume 14, Issue 11, pp. 1025 - 1040
Journal Article
Science (American Association for the Advancement of Science), ISSN 0036-8075, 5/2010, Volume 328, Issue 5981, pp. 1025 - 1029
SAGA is a transcriptional coactivator complex that is conserved across eukaryotes and performs multiple functions during transcriptional activation and... 
Proteins | Yeasts | Active sites | Ubiquitins | REPORTS | Histones | Atoms | Amino acids | Nucleosomes | Aldehydes | Zinc | COMPLEX | DOMAIN | UBP8 | CHROMATIN | NUCLEAR-PORE | UBIQUITIN | MULTIDISCIPLINARY SCIENCES | SUS1 | DEUBIQUITYLATION | MESSENGER-RNA EXPORT | ASSOCIATION | Transcription Factors - chemistry | Histone Acetyltransferases - chemistry | Nucleosomes - chemistry | Zinc - metabolism | Ubiquitin - metabolism | Crystallography, X-Ray | Ubiquitins - chemistry | Aldehydes - metabolism | Trans-Activators - chemistry | Zinc - chemistry | Endopeptidases - chemistry | Ubiquitination | Histone Acetyltransferases - metabolism | Ubiquitinated Proteins - metabolism | Ubiquitins - metabolism | Protein Structure, Tertiary | Endopeptidases - metabolism | Zinc Fingers | RNA-Binding Proteins - chemistry | Ubiquitin - chemistry | Models, Molecular | Nucleosomes - metabolism | Nuclear Proteins - metabolism | Nuclear Proteins - chemistry | Transcription Factors - metabolism | Models, Biological | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Protein Conformation | Trans-Activators - metabolism | Histones - metabolism | RNA-Binding Proteins - metabolism | Aldehydes - chemistry | Saccharomyces cerevisiae Proteins - chemistry | Ubiquitin | Physiological aspects | Transcription factors | Research | Eukaryotes | Biochemistry | Cellular biology | Proteases | Crystal structure | Modules | Mathematical models | Assembly | Elongation
Journal Article
Biochimica et biophysica acta. Biomembranes, ISSN 0005-2736, 01/2017, Volume 1859, Issue 1, pp. 28 - 39
Journal Article
Science (American Association for the Advancement of Science), ISSN 1095-9203, 2018, Volume 361, Issue 6400, p. eaar3958
Super-enhancers (SEs) are clusters of enhancers that cooperatively assemble a high density of the transcriptional apparatus to drive robust expression of genes... 
RNA-POLYMERASE-II | INTRINSIC DISORDER | PROTEIN | MULTIDISCIPLINARY SCIENCES | CELL IDENTITY | LIQUID DROPLETS | PLURIPOTENCY | TRANSITIONS | BINDING | TRANSCRIPTIONAL ELONGATION | P-TEFB | Embryonic Stem Cells - metabolism | NIH 3T3 Cells | Immunoprecipitation | Transcription Factors - chemistry | Fluorescence Recovery After Photobleaching | Humans | Molecular Imaging | Trans-Activators - chemistry | Cell Nucleus - metabolism | HEK293 Cells | Trans-Activators - genetics | Conserved Sequence | Nuclear Proteins - genetics | Mediator Complex Subunit 1 - chemistry | Mediator Complex Subunit 1 - metabolism | Serine - genetics | Nuclear Proteins - metabolism | Transcription Factors - genetics | Nuclear Proteins - chemistry | Serine - chemistry | Intrinsically Disordered Proteins - genetics | Enhancer Elements, Genetic - drug effects | Glycols - pharmacology | Gene Expression Regulation - drug effects | Transcription Factors - metabolism | Animals | Intrinsically Disordered Proteins - chemistry | Trans-Activators - metabolism | Mice | Cell Nucleus - drug effects | Mediator Complex Subunit 1 - genetics | Intrinsically Disordered Proteins - metabolism | Genetic research | Transcription factors | Genetic aspects | Research | Mammals | Chromatin | Nucleation | Transcription elongation | Genes | Gene regulation | Embryo cells | Fluorescence | Stem cell transplantation | Density | DNA-directed RNA polymerase | Cofactors | Complexity | Proteins | Nucleoli | Condensates | Clusters | Droplets | Hubs | Elongation | Deoxyribonucleic acid--DNA | Photobleaching | Amino acid sequence | Gene expression | Ribonucleic acid--RNA | Molecular chains | Organic chemistry | Enhancers | Properties (attributes) | Sensitivity | Inhibitors | Phase separation | Stem cells | Nuclei (cytology) | Protein interaction | Transcription initiation | Nuclear reactions | RNA polymerase II | Cancer
Journal Article
Nucleic acids research, ISSN 1362-4962, 2020, Volume 48, Issue 1, pp. 349 - 358
Modifications at the 5′-end of RNAs play a pivotal role in determining their fate. In eukaryotes, the DXO/Rai1 family of enzymes removes numerous 5′-end RNA... 
PATHWAYS | YEAST | CAP | PROTEIN | RNA | HUMAN-CELLS | BIOCHEMISTRY & MOLECULAR BIOLOGY | NAD(+) | IDENTIFICATION | QUALITY-CONTROL MECHANISM | RNA-Binding Proteins - genetics | Exoribonucleases - genetics | Arabidopsis - enzymology | Chloroplast Proteins - genetics | Saccharomyces cerevisiae - genetics | Exoribonucleases - chemistry | Substrate Specificity | Crystallography, X-Ray | RNA, Messenger - metabolism | Trans-Activators - chemistry | Chloroplast Proteins - chemistry | Arabidopsis Proteins - metabolism | Cloning, Molecular | Escherichia coli - metabolism | Trans-Activators - genetics | Protein Interaction Domains and Motifs | Nuclear Proteins - genetics | Binding Sites | Recombinant Proteins - metabolism | Protein Conformation, alpha-Helical | Arabidopsis Proteins - genetics | Gene Expression | Genetic Vectors - chemistry | RNA, Messenger - genetics | RNA-Binding Proteins - chemistry | Genetic Vectors - metabolism | Models, Molecular | Recombinant Proteins - chemistry | Nuclear Proteins - metabolism | Recombinant Proteins - genetics | Saccharomyces cerevisiae Proteins - genetics | Nuclear Proteins - chemistry | Arabidopsis - genetics | Animals | Arabidopsis Proteins - chemistry | Protein Conformation, beta-Strand | Escherichia coli - genetics | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Saccharomyces cerevisiae - enzymology | RNA, Messenger - chemistry | Trans-Activators - metabolism | Mice | Chloroplast Proteins - metabolism | Exoribonucleases - metabolism | RNA-Binding Proteins - metabolism | Saccharomyces cerevisiae Proteins - chemistry | nucleic acid enzymes | BASIC BIOLOGICAL SCIENCES | Nucleic Acid Enzymes
Journal Article
Molecular & cellular proteomics, ISSN 1535-9484, 2015, Volume 14, Issue 5, pp. 1419 - 1434
Genotoxic agents can cause replication fork stalling in dividing cells because of DNA lesions, eventually leading to replication fork collapse when the damage... 
E3 LIGASE | PCNA | PATHWAY | HUMAN-CELLS | BIOCHEMICAL RESEARCH METHODS | REQUIRES | SUMO-1 CONJUGATION | NEDD8-ACTIVATING ENZYME | DNA-REPAIR | IDENTIFICATION | SIGNALING NETWORKS | Adaptor Proteins, Signal Transducing - chemistry | Genomic Instability | Hydroxyurea - pharmacology | Nucleic Acid Synthesis Inhibitors - pharmacology | Humans | Molecular Sequence Data | Chromatin Assembly Factor-1 - metabolism | Trans-Activators - chemistry | Recombinant Fusion Proteins - metabolism | DNA-Binding Proteins - metabolism | Small Ubiquitin-Related Modifier Proteins - genetics | BRCA1 Protein - metabolism | Chromatin Assembly Factor-1 - genetics | Endodeoxyribonucleases - metabolism | Trans-Activators - genetics | Carrier Proteins - chemistry | Lysine - metabolism | Osteoblasts - cytology | Nuclear Proteins - genetics | BRCA1 Protein - chemistry | Amino Acid Sequence | Gene Expression | Signal Transduction | Chromatin Assembly Factor-1 - chemistry | Small Ubiquitin-Related Modifier Proteins - metabolism | Osteoblasts - drug effects | DNA Replication | Nuclear Proteins - metabolism | Endodeoxyribonucleases - chemistry | Recombinant Fusion Proteins - chemistry | DNA-Binding Proteins - genetics | Nuclear Proteins - chemistry | DNA-Binding Proteins - chemistry | Protein Interaction Mapping | BRCA1 Protein - genetics | Carrier Proteins - genetics | Endodeoxyribonucleases - genetics | Carrier Proteins - metabolism | Small Ubiquitin-Related Modifier Proteins - chemistry | Adaptor Proteins, Signal Transducing - genetics | Cell Line, Tumor | Recombinant Fusion Proteins - genetics | Sumoylation | Trans-Activators - metabolism | DNA Damage | Adaptor Proteins, Signal Transducing - metabolism | Lysine - chemistry | Osteoblasts - metabolism | Technological Innovation and Resources
Journal Article
Journal of medicinal chemistry, ISSN 0022-2623, 02/2013, Volume 56, Issue 4, pp. 1389 - 1404
Journal Article
Nucleic acids research, ISSN 0305-1048, 09/2017, Volume 45, Issue 15, pp. 8835 - 8843
Transcription factors from the NusG family bind to the elongating RNA polymerase to enable synthesis of long RNAs in all domains of life. In bacteria, NusG... 
AUTOINHIBITION | REGULATOR | MOLECULAR-DYNAMICS | DOMAIN | STRUCTURAL BASIS | PROTEIN RFAH | ELONGATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | STRUCTURE PREDICTION | NUSG | Peptide Elongation Factors - metabolism | Transcription Factors - chemistry | DNA, Bacterial - metabolism | DNA, Bacterial - chemistry | Trans-Activators - chemistry | Valine - chemistry | Isoleucine - chemistry | Phenylalanine - chemistry | Escherichia coli - metabolism | Trans-Activators - genetics | Transcription, Genetic | DNA-Directed RNA Polymerases - chemistry | Protein Interaction Domains and Motifs | Binding Sites | Peptide Elongation Factors - genetics | Amino Acid Sequence | Phenylalanine - metabolism | Models, Molecular | Escherichia coli Proteins - metabolism | DNA-Directed RNA Polymerases - genetics | Transcription Factors - genetics | Protein Folding | Isoleucine - metabolism | Sequence Homology, Amino Acid | Transcription Factors - metabolism | Peptide Elongation Factors - chemistry | Sequence Alignment | DNA, Bacterial - genetics | Valine - metabolism | Escherichia coli - genetics | Escherichia coli Proteins - genetics | Protein Binding | Trans-Activators - metabolism | Glutamic Acid - metabolism | DNA-Directed RNA Polymerases - metabolism | Escherichia coli Proteins - chemistry | Gene Expression Regulation, Bacterial | Amino Acid Substitution | Evolution, Molecular | Glutamic Acid - chemistry | Gene regulation, Chromatin and Epigenetics
Journal Article