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1. Full Text Enzyme-Friendly, Mass Spectrometry-Compatible Surfactant for In-Solution Enzymatic Digestion of Proteins
by Yu, Ying-Qing and Gilar, Martin and Lee, Peter J and Bouvier, Edouard S. P and Gebler, John C
Analytical chemistry (Washington), ISSN 0003-2700, 11/2003, Volume 75, Issue 21, pp. 6023 - 6028
Physical Sciences | Chemistry | Chemistry, Analytical | Science & Technology | Analytical chemistry | Chromatographic methods and physical methods associated with chromatography | Other chromatographic methods | Exact sciences and technology | Spectrometric and optical methods | Myoglobin - metabolism | Chymotrypsin - metabolism | Ubiquitin - metabolism | Myoglobin - chemistry | Chromatography, High Pressure Liquid | Arginine - analogs & derivatives | Urea - chemistry | Neurotensin - metabolism | Ovalbumin - metabolism | Neurotensin - chemistry | Spectrometry, Mass, Electrospray Ionization | Membrane Proteins - metabolism | Molecular Structure | Ovalbumin - chemistry | Endopeptidases - metabolism | Angiotensin II - metabolism | Muramidase - chemistry | Solubility | Ubiquitin - chemistry | Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization - methods | Muramidase - metabolism | Trypsin - metabolism | Dioxolanes - chemistry | Arginine - chemistry | Angiotensin II - chemistry | Proteins - metabolism | Membrane Proteins - chemistry | Alkanesulfonates - chemistry | Sodium Dodecyl Sulfate - chemistry | Bacteriorhodopsins - metabolism | Hydrophobic and Hydrophilic Interactions | Surface-Active Agents - chemistry | Proteins - chemistry | Bacteriorhodopsins - chemistry | Arginine - metabolism | Hydrogen-Ion Concentration | Enzymes | Usage | Composition | Chemistry, Analytic | Solution (Chemistry) | Liquid chromatography | Research | Chemical compounds | Proteins | Trypsin | Surface active agents | Acids | Proteolysis | Analysis | Mass spectrometry | Scientific imaging | Index Medicus
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2. Full Text Atomic structure of the APC/C and its mechanism of protein ubiquitination
by Chang, Leifu and Zhang, Ziguo and Yang, Jing and McLaughlin, Stephen H and Barford, David
Nature (London), ISSN 0028-0836, 06/2015, Volume 522, Issue 7557, pp. 450 - 454
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Phosphorylation | Ubiquitin - ultrastructure | Cadherins - metabolism | Humans | Apc11 Subunit, Anaphase-Promoting Complex-Cyclosome - chemistry | Ubiquitin - metabolism | Cell Cycle Proteins - ultrastructure | Substrate Specificity | Apc10 Subunit, Anaphase-Promoting Complex-Cyclosome - ultrastructure | Structure-Activity Relationship | Anaphase-Promoting Complex-Cyclosome - ultrastructure | Protein Subunits - metabolism | Ubiquitin-Conjugating Enzymes - chemistry | Apc1 Subunit, Anaphase-Promoting Complex-Cyclosome - metabolism | Cell Cycle Proteins - chemistry | Apc3 Subunit, Anaphase-Promoting Complex-Cyclosome - chemistry | Ubiquitination | Apc8 Subunit, Anaphase-Promoting Complex-Cyclosome - metabolism | Cadherins - chemistry | Cytoskeletal Proteins - metabolism | Lysine - metabolism | Anaphase-Promoting Complex-Cyclosome - chemistry | Cadherins - ultrastructure | Apc10 Subunit, Anaphase-Promoting Complex-Cyclosome - metabolism | Catalytic Domain | F-Box Proteins - metabolism | Apc3 Subunit, Anaphase-Promoting Complex-Cyclosome - metabolism | F-Box Proteins - chemistry | Cell Cycle Proteins - metabolism | Ubiquitin - chemistry | Models, Molecular | Ubiquitin-Conjugating Enzymes - ultrastructure | Cytoskeletal Proteins - chemistry | Apc1 Subunit, Anaphase-Promoting Complex-Cyclosome - chemistry | Apc8 Subunit, Anaphase-Promoting Complex-Cyclosome - chemistry | Cryoelectron Microscopy | F-Box Proteins - ultrastructure | Ubiquitin-Conjugating Enzymes - metabolism | Protein Binding | Protein Subunits - chemistry | Apc10 Subunit, Anaphase-Promoting Complex-Cyclosome - chemistry | Anaphase-Promoting Complex-Cyclosome - metabolism | Apc11 Subunit, Anaphase-Promoting Complex-Cyclosome - metabolism | Apc1 Subunit, Anaphase-Promoting Complex-Cyclosome - ultrastructure | Apc8 Subunit, Anaphase-Promoting Complex-Cyclosome - ultrastructure | Ubiquitin | Physiological aspects | Structure | Ubiquitin-proteasome system | Ligases | Proteins | Peptides | Molecular structure | Cyclin-dependent kinases | Cell division | Kinases | Gene expression | Index Medicus
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3. Full Text Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor
by Sheard, Laura B and Tan, Xu and Mao, Haibin and Withers, John and Ben-Nissan, Gili and Hinds, Thomas R and Kobayashi, Yuichi and Hsu, Fong-Fu and Sharon, Michal and Browse, John and He, Sheng Yang and Rizo, Josep and Howe, Gregg A and Zheng, Ning
Nature (London), ISSN 0028-0836, 11/2010, Volume 468, Issue 7322, pp. 400 - 407
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Metabolism | Plant physiology and development | Growth regulators | Indenes - metabolism | Amino Acids - chemistry | Molecular Sequence Data | Crystallography, X-Ray | Cyclopentanes - chemistry | Indenes - chemistry | Arabidopsis Proteins - metabolism | Plant Growth Regulators - chemistry | Amino Acids - metabolism | Isoleucine - chemistry | Inositol Phosphates - metabolism | Binding Sites | Repressor Proteins - metabolism | Protein Structure, Tertiary | Amino Acid Sequence | Peptide Fragments - metabolism | Repressor Proteins - chemistry | Arabidopsis - chemistry | Signal Transduction | F-Box Proteins - metabolism | F-Box Proteins - chemistry | Models, Molecular | Arabidopsis - metabolism | Isoleucine - metabolism | Oxylipins - metabolism | Peptide Fragments - chemistry | Arabidopsis Proteins - chemistry | Isoleucine - analogs & derivatives | Protein Binding | Cyclopentanes - metabolism | Plant Growth Regulators - metabolism | Oxylipins - chemistry | Ubiquitin | Inositol | Research | Jasmonates | Growth (Plants) | Proteins | Studies | Phosphates | Data collection | Mass spectrometry | Crystal structure | Index Medicus
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4. Full Text DOTA-Amide Lanthanide Tag for Reliable Generation of Pseudocontact Shifts in Protein NMR Spectra
by Graham, Bim and Loh, Choy Theng and Swarbrick, James David and Ung, Phuc and Shin, James and Yagi, Hiromasa and Jia, Xinying and Chhabra, Sandeep and Barlow, Nicholas and Pintacuda, Guido and Huber, Thomas and Otting, Gottfried
Bioconjugate chemistry, ISSN 1043-1802, 10/2011, Volume 22, Issue 10, pp. 2118 - 2125
Biochemistry & Molecular Biology | Physical Sciences | Chemistry | Chemistry, Organic | Life Sciences & Biomedicine | Biochemical Research Methods | Chemistry, Multidisciplinary | Science & Technology | Repressor Proteins - chemistry | Humans | Ubiquitin - chemistry | Models, Molecular | Ubiquitin - genetics | Cysteine - chemistry | Escherichia coli - chemistry | Lanthanoid Series Elements - chemistry | Heterocyclic Compounds, 1-Ring - chemistry | Nuclear Magnetic Resonance, Biomolecular - methods | Protein Conformation | Mutation | Proteins - chemistry | Escherichia coli Proteins - chemistry | Proteins | Ligands | Nuclear magnetic resonance--NMR | Chemical elements | Spectrum analysis | Binding sites | Index Medicus | Ubiquitin | Analytical chemistry | Lanthanoid Series Elements | Cysteine | Escherichia coli | Repressor Proteins | Biochemistry, Molecular Biology | Heterocyclic Compounds, 1-Ring | Chemical Sciences | Life Sciences | Escherichia coli Proteins | Nuclear Magnetic Resonance, Biomolecular | Biomolecules | Molecular biology
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5. Full Text Structural Insights into the Assembly and Function of the SAGA Deubiquitinating Module
by Nadine L. Samara and Ajit B. Datta and Christopher E. Berndsen and Xiangbin Zhang and Tingting Yao and Robert E. Cohen and Cynthia Wolberger
Science (American Association for the Advancement of Science), ISSN 0036-8075, 5/2010, Volume 328, Issue 5981, pp. 1025 - 1029
Proteins | Yeasts | Active sites | Ubiquitins | REPORTS | Histones | Atoms | Amino acids | Nucleosomes | Aldehydes | Zinc | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Structure in molecular biology | Transcription. Transcription factor. Splicing. Rna processing | Molecular genetics | Molecular biophysics | Biological and medical sciences | Molecular and cellular biology | Crystalline structure | Transcription Factors - chemistry | Histone Acetyltransferases - chemistry | Nucleosomes - chemistry | Zinc - metabolism | Ubiquitin - metabolism | Crystallography, X-Ray | Ubiquitins - chemistry | Aldehydes - metabolism | Trans-Activators - chemistry | Zinc - chemistry | Endopeptidases - chemistry | Ubiquitination | Histone Acetyltransferases - metabolism | Ubiquitinated Proteins - metabolism | Ubiquitins - metabolism | Protein Structure, Tertiary | Endopeptidases - metabolism | Zinc Fingers | RNA-Binding Proteins - chemistry | Ubiquitin - chemistry | Models, Molecular | Nucleosomes - metabolism | Nuclear Proteins - metabolism | Nuclear Proteins - chemistry | Transcription Factors - metabolism | Models, Biological | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Protein Conformation | Trans-Activators - metabolism | Histones - metabolism | RNA-Binding Proteins - metabolism | Aldehydes - chemistry | Saccharomyces cerevisiae Proteins - chemistry | Ubiquitin | Physiological aspects | Transcription factors | Research | Eukaryotes | Biochemistry | Cellular biology | Proteases | Crystal structure | Index Medicus | Modules | Mathematical models | Assembly | Elongation
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6. Full Text Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases
by Zhuang, Min and Calabrese, Matthew F and Liu, Jiang and Waddell, M. Brett and Nourse, Amanda and Hammel, Michal and Miller, Darcie J and Walden, Helen and Duda, David M and Seyedin, Steven N and Hoggard, Timothy and Harper, J. Wade and White, Kevin P and Schulman, Brenda A and Argonne National Lab. (ANL), Argonne, IL (United States)
Molecular cell, ISSN 1097-2765, 10/2009, Volume 36, Issue 1, pp. 39 - 50
PROTEINS | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Transcription Factors - chemistry | Humans | Crystallography, X-Ray | Drosophila Proteins - metabolism | Mutation - physiology | Protein Multimerization - physiology | Protein Structure, Quaternary - physiology | Ubiquitination - physiology | Peptide Fragments - genetics | Repressor Proteins - metabolism | Amino Acid Sequence | Ubiquitin-Protein Ligases - metabolism | Models, Molecular | Repressor Proteins - genetics | Recombinant Fusion Proteins - chemistry | Nuclear Proteins - chemistry | Ubiquitin-Protein Ligases - chemistry | DNA-Binding Proteins - chemistry | Cullin Proteins - chemistry | Peptide Fragments - chemistry | Phosphoprotein Phosphatases - genetics | Consensus Sequence - physiology | Recombinant Fusion Proteins - genetics | Histones - metabolism | Ubiquitin-Protein Ligases - genetics | Drosophila melanogaster | Phosphoprotein Phosphatases - chemistry | Protein Binding - physiology | Adaptor Proteins, Signal Transducing - chemistry | Histones - chemistry | Protein Interaction Domains and Motifs - physiology | Phosphoprotein Phosphatases - metabolism | Recombinant Fusion Proteins - metabolism | DNA-Binding Proteins - metabolism | Cullin Proteins - metabolism | Nuclear Proteins - genetics | Peptide Fragments - metabolism | Repressor Proteins - chemistry | Nuclear Proteins - metabolism | Drosophila Proteins - chemistry | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Cullin Proteins - genetics | Transcription Factors - metabolism | Animals | Histones - genetics | Adaptor Proteins, Signal Transducing - genetics | Drosophila Proteins - genetics | Adaptor Proteins, Signal Transducing - metabolism | Ubiquitin | Chromatin | Phosphatases | Ligases | Index Medicus | CHROMATIN | BASIC BIOLOGICAL SCIENCES | SUBSTRATES | FLEXIBILITY | GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE | LIGASES | DIMERIZATION | DIMERS | PHOSPHATASES
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7. Full Text Compositional Control of Phase-Separated Cellular Bodies
by Banani, Salman F and Rice, Allyson M and Peeples, William B and Lin, Yuan and Jain, Saumya and Parker, Roy and Rosen, Michael K
Cell (Cambridge), ISSN 0092-8674, 07/2016, Volume 166, Issue 3, pp. 651 - 663
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Body Composition | Organelles - chemistry | Cell Line | Yeasts | Humans | Ubiquitins - chemistry | Amino Acid Motifs | Polypyrimidine Tract-Binding Protein - chemistry | Cell Compartmentation | Artificial Cells - chemistry | Protein Engineering | Electrochemistry | Carrier Proteins - chemistry | Cell Nucleus - chemistry | Molecular Structure | HeLa Cells | Proteins - chemistry | In Vitro Techniques | Cytoplasm | Proteins | Physiological aspects | RNA | Analysis | Yuan (China) | Index Medicus
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8. Full Text A chemical biology route to site-specific authentic protein modifications
by Yang, Aerin and Ha, Sura and Ahn, Jihye and Kim, Rira and Kim, Sungyoon and Lee, Younghoon and Kim, Jaehoon and Söll, Dieter and Lee, Hee-Yoon and Park, Hee-Sung
Science (American Association for the Advancement of Science), ISSN 0036-8075, 11/2016, Volume 354, Issue 6312, pp. 623 - 626
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Protein Biosynthesis | Protein Engineering - methods | Histones - chemistry | Xenopus laevis | Ubiquitin - chemistry | Histones - biosynthesis | Recombinant Proteins - chemistry | Alanine - chemistry | Iodides - chemistry | Recombinant Proteins - biosynthesis | Zinc - chemistry | Xenopus Proteins - chemistry | Alanine - analogs & derivatives | Animals | Copper - chemistry | Green Fluorescent Proteins - biosynthesis | Xenopus Proteins - biosynthesis | Protein Processing, Post-Translational | Acetylation | Green Fluorescent Proteins - chemistry | Methylation | Ubiquitin - biosynthesis | Phosphoserine - chemistry | Post-translational modification | Protein research | Research | Proteins | Biodiversity | Chemicals | Biological activity | Index Medicus | Carbon-carbon composites | Histones | Copper | Zinc | Functional groups | Radicals | Recombinant
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9. Full Text Ubiquitin-like Protein Conjugation: Structures, Chemistry, and Mechanism
by Cappadocia, Laurent and Lima, Christopher D
Chemical reviews, ISSN 0009-2665, 02/2018, Volume 118, Issue 3, pp. 889 - 918
Physical Sciences | Chemistry | Chemistry, Multidisciplinary | Science & Technology | Catalytic Domain | NEDD8 Protein - metabolism | Small Ubiquitin-Related Modifier Proteins - chemistry | Small Ubiquitin-Related Modifier Proteins - metabolism | Humans | Ubiquitin - chemistry | Ubiquitin - metabolism | Ubiquitin-Protein Ligases - metabolism | Substrate Specificity | Ubiquitin-Protein Ligases - chemistry | NEDD8 Protein - chemistry | Proteins | Enzymes | Cascades | Lipids | Conjugation | Machinery | Cells | Index Medicus | Review
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