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1. Full Text Human Virome
by Zárate, Selene and Taboada, Blanca and Yocupicio-Monroy, Martha and Arias, Carlos F
Archives of Medical Research, ISSN 0188-4409, 11/2017, Volume 48, Issue 8, pp. 701 - 716
The human virome is composed by the set of all viruses, eukaryotic and prokaryotic, present in the human body; as each body compartment constitutes a different... 
Phagome | Virome in health | Virus-microbiome interaction | Human virome | Virome in disease | Clinical virome | MEDICINE, RESEARCH & EXPERIMENTAL | BACTERIOPHAGES | CROHNS-DISEASE | ROTAVIRUS INFECTION | HUMAN GUT VIROME | METAGENOMIC ANALYSES | PHAGE | COMMUNITY | BACTERIAL MICROBIOME | STRANDED-DNA VIRUSES | ASSOCIATION | Physiological aspects | Medicine, Experimental | Antiviral agents | Medical research | Bacterial infections | Health aspects
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2. Full Text Stable core virome despite variable microbiome after fecal transfer
by Broecker, Felix and Russo, Giancarlo and Klumpp, Jochen and Moelling, Karin
Gut Microbes, ISSN 1949-0976, 05/2017, Volume 8, Issue 3, pp. 214 - 220
We recently described the 4.5-year time course of the enteric bacterial microbiota and virome of a patient cured from recurrent Clostridium difficile infection... 
virome | core virome | Clostridium difficile | long-term analysis | microbiome | fecal microbiota transplantation | sequencing | BACTERIOPHAGES | VIRUS | MICROBIOLOGY | HUMAN GUT VIROME | FUTURE | CLOSTRIDIUM-DIFFICILE | TRANSPLANTATION | INFLAMMATORY-BOWEL-DISEASE | METAGENOMICS | PATIENT | GASTROENTEROLOGY & HEPATOLOGY | Host-Pathogen Interactions | Feces - microbiology | Viruses - isolation & purification | Feces - virology | Humans | Gastrointestinal Microbiome | RNA, Ribosomal, 16S - isolation & purification | Clostridium Infections - therapy | Dysbiosis | Fecal Microbiota Transplantation
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3. Full Text Bacteriophages of the Human Gut: The “Known Unknown” of the Microbiome
by Shkoporov, Andrey N and Hill, Colin
Cell Host & Microbe, ISSN 1931-3128, 02/2019, Volume 25, Issue 2, pp. 195 - 209
The human gut microbiome is a dense and taxonomically diverse consortium of microorganisms. While the bacterial components of the microbiome have received... 
virome | human microbiome | phageome | gut microbiota | bacteriophages
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4. Full Text Phi CrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis
by Shkoporov, AN and Khokhlova, EV and Fitzgerald, CB and Stockdale, SR and Draper, LA and Ross, RP and Hill, C
NATURE COMMUNICATIONS, ISSN 2041-1723, 11/2018, Volume 9
CrAssphages are an extensive and ubiquitous family of tailed bacteriophages, predicted to infect bacteria of the order Bacteroidales. Despite being found in... 
VIROME | TWINS | CRASSPHAGE | MULTIDISCIPLINARY SCIENCES | PHAGE
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5. Full Text Kinetics of TTV-DNA Plasma Load: A Global Measure of Immune Suppression?
by Mitchell, Alicia B and Glanville, Allan R
Transplantation, ISSN 0041-1337, 04/2019, Volume 103, Issue 4, pp. 660 - 661
SURGERY | LUNG | VIROME | IMMUNOLOGY | REJECTION | TRANSPLANTATION
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6. Full Text RNA viromes of the oriental hybrid lily cultivar "sorbonne" 06 Biological Sciences 0604 Genetics 11 Medical and Health Sciences 1108 Medical Microbiology
by Jo, Yeonhwa and Cho, Won Kyong
BMC Genomics, 10/2018, Volume 19, Issue 1
Virus | "Sorbonne" | Genome | Virome | Lily | Transcriptome
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7. Full Text Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children
by Zhao, Guoyan and Vatanen, Tommi and Droit, Lindsay and Park, Arnold and Kostic, Aleksandar D and Poon, Tiffany W and Vlamakis, Hera and Siljander, Heli and Härkönen, Taina and Hämäläinen, Anu-Maaria and Peet, Aleksandr and Tillmann, Vallo and Ilonen, Jorma and Wang, David and Knip, Mikael and Xavier, Ramnik J and Virgin, Herbert W
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 07/2017, Volume 114, Issue 30, pp. E6166 - E6175
Viruses have long been considered potential triggers of autoimmune diseases. Here we defined the intestinal virome from birth to the development of... 
Bacteriophages | Circoviridae | Type 1 diabetes | Virome | Microbiome | type 1 diabetes | VIRUS | MULTIDISCIPLINARY SCIENCES | bacteriophages | FECAL MICROBIOTA | FAST PROGRAM | HUMAN GUT VIROME | MELLITUS | microbiome | virome | CONGENITAL-RUBELLA | BACTERIAL MICROBIOME | GENE SELECTION | INFECTION | MICE | Autoimmunity | Genetic Predisposition to Disease | Diabetes Mellitus, Type 1 - virology | Humans | Gastrointestinal Microbiome | Intestines - virology | Infant | Diabetes Mellitus, Type 1 - immunology | Circoviridae - isolation & purification | Infant, Newborn | Cohort Studies | Biological Sciences | PNAS Plus
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8. Full Text A decade of RNA virus metagenomics is (not) enough
by Greninger, Alexander L
Virus Research, ISSN 0168-1702, 01/2018, Volume 244, pp. 218 - 229
It is hard to overemphasize the role that metagenomics has had on our recent understanding of RNA virus diversity. Metagenomics in the 21st century has brought... 
Metagenomics | Viral discovery | RNA virus | Conjoined circles | FECAL VIROME | IDENTIFICATION | VIROME REVEALS | DISCOVERY | EVOLUTION | VIROLOGY | MESSENGER-RNA | VIRAL METAGENOMICS | DIVERSITY | GENOME ANALYSIS | PICORNAVIRUS | RNA
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9. Full Text Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission
by Duranti, Sabrina and Lugli, Gabriele Andrea and Mancabelli, Leonardo and Armanini, Federica and Turroni, Francesca and James, Kieran and Ferretti, Pamela and Gorfer, Valentina and Ferrario, Chiara and Milani, Christian and Mangifesta, Marta and Anzalone, Rosaria and Zolfo, Moreno and Viappiani, Alice and Pasolli, Edoardo and Bariletti, Ilaria and Canto, Rosarita and Clementi, Rosanna and Cologna, Marina and Crifò, Tiziana and Cusumano, Giuseppina and Fedi, Sabina and Gottardi, Stefania and Innamorati, Claudia and Masè, Caterina and Postai, Daniela and Savoi, Daniela and Soffiati, Massimo and Tateo, Saverio and Pedrotti, Anna and Segata, Nicola and Van Sinderen, Douwe and Ventura, Marco
Microbiome, ISSN 2049-2618, 06/2017, Volume 5, Issue 1, pp. 66 - 13
Background: The correct establishment of the human gut microbiota represents a crucial development that commences at birth. Different hypotheses propose that... 
Vertical transmission | Microbiota | Bifidobacteria | Virome | Microbiome | STRAINS | EARLY-LIFE | MOTHER | MICROBIOLOGY | HUMAN GUT VIROME | BIFIDUM PRL2010 | BACTERIAL MICROBIOME | DIVERSITY | HUMAN-MILK OLIGOSACCHARIDES | GENOME ANALYSIS | BREVE UCC2003 | Bifidobacterium - genetics | Humans | Breast Feeding | Gastrointestinal Microbiome | Infant | Bifidobacterium - isolation & purification | Mothers | Sequence Analysis, DNA | Polysaccharides - metabolism | Bacteriophages - isolation & purification | Feces - microbiology | Bifidobacterium - virology | Bacteriophages - genetics | Bacteriophages - physiology | Milk, Human - microbiology | Bifidobacterium - physiology | Infant, Newborn | Infants (Newborn) | Polysaccharides | Microbiota (Symbiotic organisms) | Analysis | Neonates | Breastfeeding & lactation | Baby foods | Phages | Vagina | Heredity | Infants | Genomes | Metabolism | Babies | Gene amplification | Disease transmission | Newborn babies | Maternal inheritance | Spacer | Physiology | Breast milk | Milk
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10. Full Text Metagenomic analysis of virome cross-talk between cultivated Solanum lycopersicum and wild Solanum nigrum
by Ma, Yuxin and Marais, Armelle and Lefebvre, Marie and Faure, Chantal and Candresse, Thierry
Virology, ISSN 0042-6822, 01/2020, Volume 540, pp. 38 - 44
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11. Full Text Highly diverse population of Picornaviridae and other members of the Picornavirales, in Cameroonian fruit bats
by Yinda, Claude Kwe and Zell, Roland and Deboutte, Ward and Zeller, Mark and Conceição-Neto, Nádia and Heylen, Elisabeth and Maes, Piet and Knowles, Nick J and Ghogomu, Stephen Mbigha and Van Ranst, Marc and Matthijnssens, Jelle
BMC genomics, ISSN 1471-2164, 03/2017, Volume 18, Issue 1, p. 249
Background: The order Picornavirales represents a diverse group of positive-stranded RNA viruses with small non-enveloped icosahedral virions. Recently, bats... 
Unbiased sequencing | Picornaviruses | Bat | Virome | Picornavirales | VIROME ANALYSIS | FECAL VIROME | HUMAN STOOL | GENETIC-CHARACTERIZATION | RNA VIRUSES | IDENTIFICATION | INFERENCE | EVOLUTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | SUPERFAMILY | REVEALS | Genetic Variation | Metagenomics | Picornaviridae - genetics | Chiroptera - virology | Feces - virology | Animals | Picornaviridae - physiology | Bats | Biochemistry | Fruit trees | Epidemiology | Programming languages | Fruits | Proteins | Fungi | Hepatitis | Poliomyelitis | Virions | Human immunodeficiency virus--HIV | Classification | Phylogenetics | Respiratory tract diseases | Feces | Frames | Structural proteins | Information retrieval | RNA polymerase | Mammals | Pools | Sun | Chymotrypsin | Insects | Mist | Replication | Bayesian analysis | Genetic variability | Arches | Taxonomy | Shelters | Bias | Gastroenteritis | Antibodies | Viruses | Genomes | Discriminators | Respiratory tract | Databases | Site selection | Intestine | Arthropods | Bacteria | Meningitis | Mathematical models | Paralysis | Heart diseases | Encephalitis | Nucleotide sequence | Algae | Diabetes mellitus | Functional analysis | Ribonucleic acid--RNA | Vertebrates | N-Terminus
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12. Full Text Gut mucosal virome alterations in ulcerative colitis
by Zuo, Tao and Lu, Xiao-Juan and Zhang, Yu and Cheung, Chun Pan and Lam, Siu and Zhang, Fen and Tang, Whitney and Ching, Jessica Y.L and Zhao, Risheng and Chan, Paul K.S and Sung, Joseph J.Y and Yu, Jun and Chan, Francis K.L and Cao, Qian and Sheng, Jian-Qiu and Ng, Siew C
Gut, ISSN 0017-5749, 07/2019, Volume 68, Issue 7, pp. 1169 - 1179
Objective The pathogenesis of UC relates to gut microbiota dysbiosis. We postulate that alterations in the viral community populating the intestinal mucosa... 
Gut mucosa | Virome metacommunity | Bacteria | Virome | Ulcerative colitis | BACTERIA | EVOLUTION | FECAL MICROBIOTA | DISEASE | DYNAMICS | LACTIC-DEHYDROGENASE VIRUS | HOST HEALTH | MICE | DIVERSITY | INFECTION | GASTROENTEROLOGY & HEPATOLOGY | virome | bacteria | virome metacommunity | 2312 | Gut Microbiota | ulcerative colitis | 1506 | gut mucosa
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13. Full Text Urobiome: In Sickness and in Health
by Wojciuk, Bartosz and Salabura, Agata and Grygorcewicz, Bartłomiej and Kędzierska, Karolina and Ciechanowski, Kazimierz and Dołęgowska, Barbara
Microorganisms, ISSN 2076-2607, 11/2019, Volume 7, Issue 11, p. 548
The human microbiome has been proven to contribute to the human condition, both in health and in disease. The metagenomic approach based on next-generation... 
virome | chronic kidney disease | urobiome
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14. Full Text Gut Bacteriophage: Current Understanding and Challenges
by Sutton, Thomas D. S and Hill, Colin
Frontiers in Endocrinology, ISSN 1664-2392, 11/2019, Volume 10
The gut microbiome is widely accepted to have a significant impact on human health yet, despite years of research on this complex ecosystem, the contributions... 
virome | microbiota | phage-host interactions | bacteriophage | microbiome
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