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Nucleic acids research, ISSN 0305-1048, 2015, Volume 43, Issue 1, pp. W389 - W394
JPred4 (http://www.compbio.dundee.ac.uk/jpred4) is the latest version of the popular JPred protein secondary structure prediction server which provides... 
FOLD-RECOGNITION | PROFILES | DATABASE | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | 3-DIMENSIONAL STRUCTURES | ACCURACY | Software | Algorithms | Internet | Protein Structure, Secondary | Solvents - chemistry | Index Medicus | Web Server issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2019, Volume 47, Issue W1, pp. W295 - W299
MS²PIP is a data-driven tool that accurately predicts peak intensities for a given peptide's fragmentation mass spectrum. Since the release of the MS²PIP web... 
Web Server Issue
Journal Article
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue W1, pp. W200 - W204
Abstract The HMMER webserver [http://www.ebi.ac.uk/Tools/hmmer] is a free-to-use service which provides fast searches against widely used sequence databases... 
DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FAMILY | Web Server Issue
Journal Article
Nucleic acids research, ISSN 0305-1048, 2015, Volume 43, Issue 1, pp. W30 - W38
The HMMER website, available at http://www.ebi.ac.uk/Tools/hmmer/, provides access to the protein homology search algorithms found in the HMMER software suite.... 
DATABASE | SEQUENCES | ENERGY CONTENT | INFORMATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOLOGY | PROTEIN DATA-BANK | ACID SUBSTITUTION MATRICES | HIDDEN MARKOV-MODELS | PREDICTION | Protein Structure, Tertiary | Sequence Homology, Amino Acid | Sequence Analysis, Protein | Markov Chains | Sequence Alignment | Algorithms | Databases, Protein | Software | Internet | Index Medicus | Web Server issue
Journal Article
Nucleic acids research, ISSN 0305-1048, 05/2019, Volume 47, Issue W1, pp. W357 - W364
SwissTargetPrediction is a web tool, on-line since 2014, that aims to predict the most probable protein targets of small molecules. Predictions are based on... 
Web Server Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue W1, pp. W486 - W494
Abstract We present a new update to MetaboAnalyst (version 4.0) for comprehensive metabolomic data analysis, interpretation, and integration with other omics... 
METAANALYSIS | DATABASE | WEB-BASED TOOL | SERVER | BIOCHEMISTRY & MOLECULAR BIOLOGY | WORKFLOW | Web Server Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue W1, pp. W49 - W54
Abstract Plant regulatory small RNAs (sRNAs), which include most microRNAs (miRNAs) and a subset of small interfering RNAs (siRNAs), such as the phased siRNAs... 
MICRORNA TARGETS | GENOMICS | ARABIDOPSIS | BIOGENESIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | PREDICTION | Web Server Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2017, Volume 45, Issue 1, pp. W98 - W102
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue W1, pp. W95 - W101
Abstract Complex carbohydrates of plants are the main food sources of animals and microbes, and serve as promising renewable feedstock for biofuel and... 
CAZY | DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | MICROBIOTA | HEALTH | RESOURCE | Web Server Issue
Journal Article
Nucleic acids research, ISSN 0305-1048, 2015, Volume 43, Issue 1, pp. W65 - W71
With the avalanche of biological sequences generated in the post-genomic age, one of the most challenging problems in computational biology is how to... 
BIOINFORMATICS | TUPLE NUCLEOTIDE COMPOSITION | DATABASE | PACKAGE | BIOCHEMISTRY & MOLECULAR BIOLOGY | AMINO-ACID-COMPOSITION | COVARIANCE | PREDICTION | Sequence Analysis, RNA - methods | Sequence Analysis, Protein - methods | Software | Internet | Machine Learning | Sequence Analysis, DNA - methods | Index Medicus | Web Server issue
Journal Article