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Journal Article
Journal Article
by Myburg, Alexander A and Grattapaglia, Dario and Tuskan, Gerald A and Hellsten, Uffe and Hayes, Richard D and Grimwood, Jane and Jenkins, Jerry and Lindquist, Erika and Tice, Hope and Bauer, Diane and Goodstein, David M and Dubchak, Inna and Poliakov, Alexandre and Mizrachi, Eshchar and Kullan, Anand R. K and Hussey, Steven G and Pinard, Desre and Van Der Merwe, Karen and Singh, Pooja and Van Jaarsveld, Ida and Silva-Junior, Orzenil B and Togawa, Roberto C and Pappas, Marilia R and Faria, Danielle A and Sansaloni, Carolina P and Petroli, Cesar D and Yang, Xiaohan and Ranjan, Priya and Tschaplinski, Timothy J and Ye, Chu-Yu and Li, Ting and Sterck, Lieven and Vanneste, Kevin and Murat, Florent and Soler, Marçal and Clemente, Hélène San and Saidi, Naijib and Cassan-Wang, Hua and Dunand, Christophe and Hefer, Charles A and Bornberg-Bauer, Erich and Kersting, Anna R and Vining, Kelly and Amarasinghe, Vindhya and Ranik, Martin and Naithani, Sushma and Elser, Justin and Boyd, Alexander E and Liston, Aaron and Spatafora, Joseph W and Dharmwardhana, Palitha and Raja, Rajani and Sullivan, Christopher and Romanel, Elisson and Alves-Ferreira, Marcio and Külheim, Carsten and Foley, William and Carocha, Victor and Paiva, Jorge and Kudrna, David and Brommonschenkel, Sergio H and Pasquali, Giancarlo and Byrne, Margaret and Rigault, Philippe and Tibbits, Josquin and Spokevicius, Antanas and Jones, Rebecca C and Steane, Dorothy A and Vaillancourt, René E and Potts, Brad M and Joubert, Fourie and Barry, Kerrie and Pappas Jr, Georgios J and Strauss, Steven H and Jaiswal, Pankaj and Grima-Pettenati, Jacqueline and Salse, Jérôme and Van De Peer, Yves and Rokhsar, Daniel S and Schmutz, Jeremy and Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Nature, ISSN 0028-0836, 2014, Volume 510, Issue 7505, pp. 356 - 362
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 03/2016, Volume 17, Issue 1, pp. 115 - 115
Background: Scaffolding is an essential step in the genome assembly process. Current methods based on large fragment paired-end reads or long reads allow an... 
Genome map | Arabidopsis | Scaffolding | Anchoring | Whole genome profiling | MAPS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | VALIDATION | NOVO | Index Medicus
Journal Article
Frontiers in plant science, ISSN 1664-462X, 2018, Volume 9, pp. 1099 - 1099
[This corrects the article DOI: 10.3389/fpls.2018.00604.]. 
genome evolution | whole genome duplication | genome sequence | Arachis ipaensis | polyploidizations
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 2017, Volume 45, Issue 4, pp. e18 - e18
The evolution in next-generation sequencing (NGS) technology has led to the development of many different assembly algorithms, but few of them focus on... 
SHORT DNA-SEQUENCES | CHLOROPLAST GENOME | BIOCHEMISTRY & MOLECULAR BIOLOGY | Coleoptera - genetics | Algorithms | Animals | Avicennia - genetics | Genome, Chloroplast | Software | Genome, Mitochondrial | Whole Genome Sequencing - methods | Index Medicus | Methods Online
Journal Article
Bioinformatics, ISSN 1367-4803, 05/2018, Volume 34, Issue 10, pp. 1629 - 1634
Abstract Motivation The ability to produce and analyze whole genome sequencing (WGS) data from samples with structural variations (SV) generated the need to... 
BROWSER | CIRCOS | VIEWER | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | JAVASCRIPT LIBRARY | WEB APPLICATIONS | Genomic Structural Variation | Humans | Data Visualization | Software | Whole Genome Sequencing - methods | Genome, Human | Genomics - methods | Index Medicus
Journal Article
by Northcott, Paul A and Buchhalter, Ivo and Morrissy, A. Sorana and Hovestadt, Volker and Weischenfeldt, Joachim and Ehrenberger, Tobias and Gröbner, Susanne and Segura-Wang, Maia and Zichner, Thomas and Rudneva, Vasilisa A and Warnatz, Hans-Jörg and Sidiropoulos, Nikos and Phillips, Aaron H and Schumacher, Steven and Kleinheinz, Kortine and Waszak, Sebastian M and Erkek, Serap and Jones, David T. W and Worst, Barbara C and Kool, Marcel and Zapatka, Marc and Jäger, Natalie and Chavez, Lukas and Hutter, Barbara and Bieg, Matthias and Paramasivam, Nagarajan and Heinold, Michael and Gu, Zuguang and Ishaque, Naveed and Jäger-Schmidt, Christina and Imbusch, Charles D and Jugold, Alke and Hübschmann, Daniel and Risch, Thomas and Amstislavskiy, Vyacheslav and Gonzalez, Francisco German Roiguez and Weber, Ursula D and Wolf, Stephan and Robinson, Giles W and Zhou, Xin and Wu, Gang and Finkelstein, David and Liu, Yanling and Cavalli, Florence M. G and Luu, Betty and Ramaswamy, Vijay and Wu, Xiaochong and Koster, Jan and Ryzhova, Marina and Cho, Yoon-Jae and Pomeroy, Scott L and Herold-Mende, Christel and Schuhmann, Martin and Ebinger, Martin and Liau, Linda M and Mora, Jaume and McLendon, Roger E and Jabado, Nada and Kumabe, Toshihiro and Chuah, Eric and Ma, Yussanne and Moore, Richard A and Mungall, Anew J and Mungall, Karen L and Thiessen, Nina and Tse, Kane and Wong, Tina and Jones, Steven J. M and Witt, Olaf and Milde, Till and von Deimling, Aneas and Capper, David and Korshunov, Aney and Yaspo, Marie-Laure and Kriwacki, Richard and Gajjar, Amar and Zhang, Jinghui and Beroukhim, Rameen and Fraenkel, Ernest and Korbel, Jan O and Brors, Benedikt and Schlesner, Matthias and Eils, Roland and Marra, Marco A and Pfister, Stefan M and Taylor, Michael D and Lichter, Peter
Nature, ISSN 0028-0836, 2017, Volume 547, Issue 7663, pp. 311 - 317
Journal Article